RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 SLC52A2Q9HAB3 445 aa25.65■■□□□ 1.7
PHGDH-210ENST00000641115 MIS18AQ9NYP9 233 aa25.65■■□□□ 1.7
PHGDH-210ENST00000641115 ZNF772Q68DY9 489 aaPredicted RBP25.64■■□□□ 1.7
PHGDH-210ENST00000641115 BTBD11A6QL63 1104 aa25.63■■□□□ 1.69
PHGDH-210ENST00000641115 SUPT16HQ9Y5B9 1047 aaKnown RBP25.63■■□□□ 1.69
PHGDH-210ENST00000641115 ERVV-2B6SEH9 535 aa25.62■■□□□ 1.69
PHGDH-210ENST00000641115 CABP4P57796 275 aa25.62■■□□□ 1.69
PHGDH-210ENST00000641115 DOT1LQ8TEK3 1739 aa25.61■■□□□ 1.69
PHGDH-210ENST00000641115 NFATC2IPQ8NCF5 419 aa25.6■■□□□ 1.69
PHGDH-210ENST00000641115 ITGB4P16144 1822 aa25.59■■□□□ 1.69
PHGDH-210ENST00000641115 TWISTNBQ3B726 338 aaPredicted RBP25.58■■□□□ 1.69
PHGDH-210ENST00000641115 C8orf58Q8NAV2 365 aa25.57■■□□□ 1.68
PHGDH-210ENST00000641115 ONECUT3O60422 494 aaPredicted RBP25.56■■□□□ 1.68
PHGDH-210ENST00000641115 MARCH10Q8NA82 808 aaPredicted RBP25.56■■□□□ 1.68
PHGDH-210ENST00000641115 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
PHGDH-210ENST00000641115 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
PHGDH-210ENST00000641115 ELL2O00472 640 aaPredicted RBP25.55■■□□□ 1.68
PHGDH-210ENST00000641115 PAPPAQ13219 1627 aa25.54■■□□□ 1.68
PHGDH-210ENST00000641115 RARSP54136 660 aaKnown RBP25.54■■□□□ 1.68
PHGDH-210ENST00000641115 TMOD3Q9NYL9 352 aa25.54■■□□□ 1.68
PHGDH-210ENST00000641115 KAT6BQ8WYB5 2073 aa25.53■■□□□ 1.68
PHGDH-210ENST00000641115 VAMP4O75379 141 aa25.53■■□□□ 1.68
PHGDH-210ENST00000641115 KRT24Q2M2I5 525 aa25.53■■□□□ 1.68
PHGDH-210ENST00000641115 SOS1Q07889 1333 aaPredicted RBP25.53■■□□□ 1.68
PHGDH-210ENST00000641115 EIF4A1P60842 406 aaKnown RBP25.52■■□□□ 1.68
PHGDH-210ENST00000641115 ZNF790Q6PG37 636 aa25.52■■□□□ 1.68
PHGDH-210ENST00000641115 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
PHGDH-210ENST00000641115 TTC5Q8N0Z6 440 aa25.52■■□□□ 1.68
PHGDH-210ENST00000641115 RBM6P78332 1123 aaKnown RBP25.52■■□□□ 1.68
PHGDH-210ENST00000641115 RNF123Q5XPI4 1314 aa25.51■■□□□ 1.67
PHGDH-210ENST00000641115 UBR2Q8IWV8 1755 aa25.51■■□□□ 1.67
PHGDH-210ENST00000641115 KCNQ3O43525 872 aa25.51■■□□□ 1.67
PHGDH-210ENST00000641115 NEFLP07196 543 aa25.51■■□□□ 1.67
PHGDH-210ENST00000641115 RRP1P56182 461 aaKnown RBP25.5■■□□□ 1.67
PHGDH-210ENST00000641115 SLC39A6Q13433 755 aa25.5■■□□□ 1.67
PHGDH-210ENST00000641115 ALDH1L2Q3SY69 923 aa25.5■■□□□ 1.67
PHGDH-210ENST00000641115 BCAR3O75815 825 aa25.49■■□□□ 1.67
PHGDH-210ENST00000641115 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
PHGDH-210ENST00000641115 SMC4Q9NTJ3 1288 aa25.49■■□□□ 1.67
PHGDH-210ENST00000641115 SYTL4Q96C24 671 aaPredicted RBP25.48■■□□□ 1.67
PHGDH-210ENST00000641115 BCL2L13Q9BXK5 485 aa25.48■■□□□ 1.67
PHGDH-210ENST00000641115 BCL9O00512 1426 aa25.48■■□□□ 1.67
PHGDH-210ENST00000641115 BRWD3Q6RI45 1802 aa25.48■■□□□ 1.67
PHGDH-210ENST00000641115 HOXB7P09629 217 aa25.48■■□□□ 1.67
PHGDH-210ENST00000641115 SSH1Q8WYL5 1049 aa25.47■■□□□ 1.67
PHGDH-210ENST00000641115 PIGBQ92521 554 aa25.46■■□□□ 1.67
PHGDH-210ENST00000641115 HEG1Q9ULI3 1381 aa25.46■■□□□ 1.67
PHGDH-210ENST00000641115 PRIM1P49642 420 aaKnown RBP25.45■■□□□ 1.67
PHGDH-210ENST00000641115 C5P01031 1676 aa25.45■■□□□ 1.66
PHGDH-210ENST00000641115 ACSBG1Q96GR2 724 aa25.45■■□□□ 1.66
PHGDH-210ENST00000641115 FMNL2Q96PY5 1086 aa25.45■■□□□ 1.66
PHGDH-210ENST00000641115 CHMP4AQ9BY43 222 aa25.45■■□□□ 1.66
PHGDH-210ENST00000641115 CANXP27824 592 aaKnown RBP25.44■■□□□ 1.66
PHGDH-210ENST00000641115 RXRBP28702 533 aa25.44■■□□□ 1.66
PHGDH-210ENST00000641115 KCPQ6ZWJ8 1503 aa25.43■■□□□ 1.66
PHGDH-210ENST00000641115 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
PHGDH-210ENST00000641115 LAMB4A4D0S4 1761 aa25.43■■□□□ 1.66
PHGDH-210ENST00000641115 ZNF496Q96IT1 587 aaPredicted RBP25.43■■□□□ 1.66
PHGDH-210ENST00000641115 NHSQ6T4R5 1651 aa25.42■■□□□ 1.66
PHGDH-210ENST00000641115 GIGYF1O75420 1035 aaPredicted RBP25.42■■□□□ 1.66
PHGDH-210ENST00000641115 KIF16BQ96L93 1317 aa25.42■■□□□ 1.66
PHGDH-210ENST00000641115 PLIN1O60240 522 aa25.41■■□□□ 1.66
PHGDH-210ENST00000641115 HDGFL1Q5TGJ6 251 aa25.41■■□□□ 1.66
PHGDH-210ENST00000641115 CCDC30Q5VVM6 783 aa25.41■■□□□ 1.66
PHGDH-210ENST00000641115 FRAT1Q92837 279 aaPredicted RBP25.41■■□□□ 1.66
PHGDH-210ENST00000641115 RGS17Q9UGC6 210 aaPredicted RBP25.41■■□□□ 1.66
PHGDH-210ENST00000641115 SBF2Q86WG5 1849 aa25.41■■□□□ 1.66
PHGDH-210ENST00000641115 STK31Q9BXU1 1019 aa25.41■■□□□ 1.66
PHGDH-210ENST00000641115 TCERG1O14776 1098 aaKnown RBP25.4■■□□□ 1.66
PHGDH-210ENST00000641115 BRPF1P55201 1214 aaPredicted RBP25.4■■□□□ 1.66
PHGDH-210ENST00000641115 SNRPA1P09661 255 aaKnown RBP25.39■■□□□ 1.66
PHGDH-210ENST00000641115 KRT27Q7Z3Y8 459 aa25.39■■□□□ 1.66
PHGDH-210ENST00000641115 ATG3Q9NT62 314 aa25.39■■□□□ 1.66
PHGDH-210ENST00000641115 ASAP1Q9ULH1 1129 aa25.39■■□□□ 1.66
PHGDH-210ENST00000641115 MRPL50Q8N5N7 158 aaKnown RBP25.38■■□□□ 1.65
PHGDH-210ENST00000641115 EIF2S2P20042 333 aaKnown RBP25.37■■□□□ 1.65
PHGDH-210ENST00000641115 IRX6P78412 446 aaPredicted RBP25.37■■□□□ 1.65
PHGDH-210ENST00000641115 FAM182BQ5T319 152 aa25.37■■□□□ 1.65
PHGDH-210ENST00000641115 NECTIN2Q92692 538 aa25.37■■□□□ 1.65
PHGDH-210ENST00000641115 PTCD1O75127 700 aaKnown RBP25.37■■□□□ 1.65
PHGDH-210ENST00000641115 GTF3C3Q9Y5Q9 886 aa25.37■■□□□ 1.65
PHGDH-210ENST00000641115 IPO8O15397 1037 aaKnown RBP25.36■■□□□ 1.65
PHGDH-210ENST00000641115 ZKSCAN2Q63HK3 967 aa25.36■■□□□ 1.65
PHGDH-210ENST00000641115 BTAF1O14981 1849 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 PRAMEF22A3QJZ6 481 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 KCNQ2O43526 872 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 FKBP8Q14318 412 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 POTEAQ6S8J7 498 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 NOB1Q9ULX3 412 aaKnown RBP25.35■■□□□ 1.65
PHGDH-210ENST00000641115 RGS12O14924 1447 aa25.35■■□□□ 1.65
PHGDH-210ENST00000641115 SLC4A2P04920 1241 aa25.34■■□□□ 1.65
PHGDH-210ENST00000641115 FAM196AQ6ZSG2 479 aa25.33■■□□□ 1.65
PHGDH-210ENST00000641115 VSIG10Q8N0Z9 540 aa25.33■■□□□ 1.65
PHGDH-210ENST00000641115 RBM42Q9BTD8 480 aaKnown RBP25.33■■□□□ 1.65
PHGDH-210ENST00000641115 ATF7IPQ6VMQ6 1270 aa25.32■■□□□ 1.64
PHGDH-210ENST00000641115 SMARCC1Q92922 1105 aaPredicted RBP25.32■■□□□ 1.64
PHGDH-210ENST00000641115 DBF4Q9UBU7 674 aaPredicted RBP25.32■■□□□ 1.64
PHGDH-210ENST00000641115 MS4A1P11836 297 aa25.31■■□□□ 1.64
PHGDH-210ENST00000641115 PDE3AQ14432 1141 aa25.31■■□□□ 1.64
PHGDH-210ENST00000641115 PALLDQ8WX93 1383 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms