RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MEGF6O75095 1541 aa21.78■■□□□ 1.08
PHGDH-208ENST00000641023 PHKG2P15735 406 aa21.78■■□□□ 1.08
PHGDH-208ENST00000641023 FLIIQ13045 1269 aa21.78■■□□□ 1.08
PHGDH-208ENST00000641023 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
PHGDH-208ENST00000641023 SMC5Q8IY18 1101 aa21.78■■□□□ 1.08
PHGDH-208ENST00000641023 TOM1L2Q6ZVM7 507 aa21.77■■□□□ 1.08
PHGDH-208ENST00000641023 NECTIN2Q92692 538 aa21.77■■□□□ 1.08
PHGDH-208ENST00000641023 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
PHGDH-208ENST00000641023 CCT4P50991 539 aaKnown RBP21.76■■□□□ 1.07
PHGDH-208ENST00000641023 FKBP5Q13451 457 aaPredicted RBP21.75■■□□□ 1.07
PHGDH-208ENST00000641023 C1orf115Q9H7X2 142 aa21.75■■□□□ 1.07
PHGDH-208ENST00000641023 KCNQ3O43525 872 aa21.75■■□□□ 1.07
PHGDH-208ENST00000641023 CACNA1FO60840 1977 aa21.74■■□□□ 1.07
PHGDH-208ENST00000641023 ADAMTS7Q9UKP4 1686 aa21.74■■□□□ 1.07
PHGDH-208ENST00000641023 COL5A2P05997 1499 aaPredicted RBP21.74■■□□□ 1.07
PHGDH-208ENST00000641023 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
PHGDH-208ENST00000641023 SLC4A10Q6U841 1118 aa21.74■■□□□ 1.07
PHGDH-208ENST00000641023 EIF2S2P20042 333 aaKnown RBP21.73■■□□□ 1.07
PHGDH-208ENST00000641023 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
PHGDH-208ENST00000641023 DCAF5Q96JK2 942 aa21.73■■□□□ 1.07
PHGDH-208ENST00000641023 ABCA3Q99758 1704 aa21.73■■□□□ 1.07
PHGDH-208ENST00000641023 SLC52A2Q9HAB3 445 aa21.73■■□□□ 1.07
PHGDH-208ENST00000641023 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
PHGDH-208ENST00000641023 F6X3S4 739 aa21.72■■□□□ 1.07
PHGDH-208ENST00000641023 EVA1CP58658 441 aa21.72■■□□□ 1.07
PHGDH-208ENST00000641023 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
PHGDH-208ENST00000641023 CYP27B1O15528 508 aa21.71■■□□□ 1.07
PHGDH-208ENST00000641023 CARD10Q9BWT7 1032 aa21.71■■□□□ 1.07
PHGDH-208ENST00000641023 KDM6AO15550 1401 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-208ENST00000641023 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.07
PHGDH-208ENST00000641023 C8orf34Q49A92 452 aa21.7■■□□□ 1.06
PHGDH-208ENST00000641023 GIGYF1O75420 1035 aaPredicted RBP21.7■■□□□ 1.06
PHGDH-208ENST00000641023 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
PHGDH-208ENST00000641023 ROBO1Q9Y6N7 1651 aa21.69■■□□□ 1.06
PHGDH-208ENST00000641023 HEG1Q9ULI3 1381 aa21.69■■□□□ 1.06
PHGDH-208ENST00000641023 NFATC2IPQ8NCF5 419 aa21.69■■□□□ 1.06
PHGDH-208ENST00000641023 STRN4Q9NRL3 753 aa21.69■■□□□ 1.06
PHGDH-208ENST00000641023 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
PHGDH-208ENST00000641023 NUCB1Q02818 461 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 ZNF790Q6PG37 636 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 SIPA1L3O60292 1781 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-208ENST00000641023 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
PHGDH-208ENST00000641023 MEIS3Q99687 375 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 CHPF2Q9P2E5 772 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-208ENST00000641023 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
PHGDH-208ENST00000641023 IL2RBP14784 551 aa21.67■■□□□ 1.06
PHGDH-208ENST00000641023 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
PHGDH-208ENST00000641023 PCDH11XQ9BZA7 1347 aa21.67■■□□□ 1.06
PHGDH-208ENST00000641023 PCDH11YQ9BZA8 1340 aa21.67■■□□□ 1.06
PHGDH-208ENST00000641023 AHDC1Q5TGY3 1603 aaPredicted RBP21.67■■□□□ 1.06
PHGDH-208ENST00000641023 LARP1Q6PKG0 1096 aaKnown RBP21.66■■□□□ 1.06
PHGDH-208ENST00000641023 ANKRD44Q8N8A2 993 aa21.66■■□□□ 1.06
PHGDH-208ENST00000641023 PARP4Q9UKK3 1724 aaKnown RBP21.65■■□□□ 1.06
PHGDH-208ENST00000641023 CHD1LQ86WJ1 897 aa21.65■■□□□ 1.06
PHGDH-208ENST00000641023 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
PHGDH-208ENST00000641023 CABP4P57796 275 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 GNAI3P08754 354 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 ANKRD45Q5TZF3 282 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 CEP85Q6P2H3 762 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 TTC5Q8N0Z6 440 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
PHGDH-208ENST00000641023 SLC39A6Q13433 755 aa21.63■■□□□ 1.05
PHGDH-208ENST00000641023 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
PHGDH-208ENST00000641023 GNAI2P04899 355 aa21.62■■□□□ 1.05
PHGDH-208ENST00000641023 MRC1P22897 1456 aa21.62■■□□□ 1.05
PHGDH-208ENST00000641023 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
PHGDH-208ENST00000641023 DCTPP1Q9H773 170 aa21.62■■□□□ 1.05
PHGDH-208ENST00000641023 LNPKQ9C0E8 428 aa21.62■■□□□ 1.05
PHGDH-208ENST00000641023 HMMRO75330 724 aa21.6■■□□□ 1.05
PHGDH-208ENST00000641023 HYPKQ9NX55 129 aa21.6■■□□□ 1.05
PHGDH-208ENST00000641023 PRAMEF22A3QJZ6 481 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 PI4KAP2A4QPH2 592 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 PI4KAP1Q8N8J0 262 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 DNAAF4Q8WXU2 420 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 SRCIN1Q9C0H9 1055 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 ERVV-2B6SEH9 535 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 TOM1O60784 492 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-208ENST00000641023 USP35Q9P2H5 1018 aa21.59■■□□□ 1.05
PHGDH-208ENST00000641023 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-208ENST00000641023 ANXA1P04083 346 aa21.58■■□□□ 1.05
PHGDH-208ENST00000641023 ZNF496Q96IT1 587 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-208ENST00000641023 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
PHGDH-208ENST00000641023 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
PHGDH-208ENST00000641023 ZBTB47Q9UFB7 747 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-208ENST00000641023 SNRPA1P09661 255 aaKnown RBP21.57■■□□□ 1.04
PHGDH-208ENST00000641023 DDX54Q8TDD1 881 aaKnown RBP21.57■■□□□ 1.04
PHGDH-208ENST00000641023 IPO9Q96P70 1041 aaKnown RBP21.57■■□□□ 1.04
PHGDH-208ENST00000641023 COL14A1Q05707 1796 aaKnown RBP21.57■■□□□ 1.04
PHGDH-208ENST00000641023 USP44Q9H0E7 712 aa21.56■■□□□ 1.04
PHGDH-208ENST00000641023 N4BP2Q86UW6 1770 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-208ENST00000641023 DDX58O95786 925 aaKnown RBP21.55■■□□□ 1.04
PHGDH-208ENST00000641023 UBTFL1P0CB47 393 aaPredicted RBP21.55■■□□□ 1.04
PHGDH-208ENST00000641023 BEND3Q5T5X7 828 aa21.55■■□□□ 1.04
PHGDH-208ENST00000641023 KSR2Q6VAB6 950 aa21.55■■□□□ 1.04
PHGDH-208ENST00000641023 PROSER3Q2NL68 480 aa21.54■■□□□ 1.04
PHGDH-208ENST00000641023 ADCY9O60503 1353 aa21.53■■□□□ 1.04
PHGDH-208ENST00000641023 MSH5O43196 834 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms