RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
SCARB2-225ENST00000640900 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
SCARB2-225ENST00000640900 ABCB7O75027 752 aa11.96□□□□□ -0.49
SCARB2-225ENST00000640900 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
SCARB2-225ENST00000640900 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
SCARB2-225ENST00000640900 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.49
SCARB2-225ENST00000640900 MCM10Q7L590 875 aa11.96□□□□□ -0.49
SCARB2-225ENST00000640900 DDX54Q8TDD1 881 aaKnown RBP11.96□□□□□ -0.49
SCARB2-225ENST00000640900 CHL1O00533 1208 aa11.95□□□□□ -0.5
SCARB2-225ENST00000640900 SLFN5Q08AF3 891 aa11.95□□□□□ -0.5
SCARB2-225ENST00000640900 PDE3BQ13370 1112 aa11.95□□□□□ -0.5
SCARB2-225ENST00000640900 THUMPD2Q9BTF0 503 aaKnown RBP11.95□□□□□ -0.5
SCARB2-225ENST00000640900 SENP3-EIF4A1A0A087X0R7 540 aa11.94□□□□□ -0.5
SCARB2-225ENST00000640900 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
SCARB2-225ENST00000640900 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
SCARB2-225ENST00000640900 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
SCARB2-225ENST00000640900 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
SCARB2-225ENST00000640900 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
SCARB2-225ENST00000640900 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
SCARB2-225ENST00000640900 TAF7Q15545 349 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-225ENST00000640900 KRT27Q7Z3Y8 459 aa11.93□□□□□ -0.5
SCARB2-225ENST00000640900 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-225ENST00000640900 ITGB4P16144 1822 aa11.93□□□□□ -0.5
SCARB2-225ENST00000640900 SBF2Q86WG5 1849 aa11.93□□□□□ -0.5
SCARB2-225ENST00000640900 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 E9PSI1 815 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 DUSP27Q5VZP5 1158 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 PAPPAQ13219 1627 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 KDM3BQ7LBC6 1761 aa11.92□□□□□ -0.5
SCARB2-225ENST00000640900 DOT1LQ8TEK3 1739 aa11.91□□□□□ -0.5
SCARB2-225ENST00000640900 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
SCARB2-225ENST00000640900 GNAI1P63096 354 aa11.91□□□□□ -0.5
SCARB2-225ENST00000640900 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
SCARB2-225ENST00000640900 NFATC2IPQ8NCF5 419 aa11.91□□□□□ -0.5
SCARB2-225ENST00000640900 POLA2Q14181 598 aa11.9□□□□□ -0.5
SCARB2-225ENST00000640900 PIGBQ92521 554 aa11.9□□□□□ -0.5
SCARB2-225ENST00000640900 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
SCARB2-225ENST00000640900 UBR2Q8IWV8 1755 aa11.9□□□□□ -0.51
SCARB2-225ENST00000640900 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
SCARB2-225ENST00000640900 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
SCARB2-225ENST00000640900 CABP4P57796 275 aa11.89□□□□□ -0.51
SCARB2-225ENST00000640900 TEFQ10587 303 aa11.89□□□□□ -0.51
SCARB2-225ENST00000640900 YTHDC1Q96MU7 727 aaKnown RBP11.89□□□□□ -0.51
SCARB2-225ENST00000640900 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
SCARB2-225ENST00000640900 KCNQ2O43526 872 aa11.88□□□□□ -0.51
SCARB2-225ENST00000640900 ZNF790Q6PG37 636 aa11.88□□□□□ -0.51
SCARB2-225ENST00000640900 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-225ENST00000640900 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
SCARB2-225ENST00000640900 ATG3Q9NT62 314 aa11.88□□□□□ -0.51
SCARB2-225ENST00000640900 CICQ96RK0 1608 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-225ENST00000640900 A0A0G2JS52 829 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 BTBD11A6QL63 1104 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 KCNQ3O43525 872 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 DSG3P32926 999 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
SCARB2-225ENST00000640900 MYT1Q01538 1121 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 TMOD3Q9NYL9 352 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
SCARB2-225ENST00000640900 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-225ENST00000640900 TSPYL4Q9UJ04 414 aa11.86□□□□□ -0.51
SCARB2-225ENST00000640900 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-225ENST00000640900 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
SCARB2-225ENST00000640900 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
SCARB2-225ENST00000640900 BTAF1O14981 1849 aa11.85□□□□□ -0.51
SCARB2-225ENST00000640900 HOXB7P09629 217 aa11.84□□□□□ -0.51
SCARB2-225ENST00000640900 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
SCARB2-225ENST00000640900 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
SCARB2-225ENST00000640900 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
SCARB2-225ENST00000640900 ZNF496Q96IT1 587 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-225ENST00000640900 SLC4A9Q96Q91 983 aa11.84□□□□□ -0.51
SCARB2-225ENST00000640900 LY75O60449 1722 aa11.83□□□□□ -0.52
SCARB2-225ENST00000640900 VAMP4O75379 141 aa11.83□□□□□ -0.52
SCARB2-225ENST00000640900 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-225ENST00000640900 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
SCARB2-225ENST00000640900 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
SCARB2-225ENST00000640900 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
SCARB2-225ENST00000640900 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
SCARB2-225ENST00000640900 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
SCARB2-225ENST00000640900 KAT6BQ8WYB5 2073 aa11.82□□□□□ -0.52
SCARB2-225ENST00000640900 KRT24Q2M2I5 525 aa11.82□□□□□ -0.52
SCARB2-225ENST00000640900 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
SCARB2-225ENST00000640900 LAS1LQ9Y4W2 734 aaKnown RBP11.82□□□□□ -0.52
SCARB2-225ENST00000640900 PLSCR1O15162 318 aa11.81□□□□□ -0.52
SCARB2-225ENST00000640900 TRIM37O94972 964 aa11.81□□□□□ -0.52
SCARB2-225ENST00000640900 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-225ENST00000640900 FMNL2Q96PY5 1086 aa11.81□□□□□ -0.52
SCARB2-225ENST00000640900 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-225ENST00000640900 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-225ENST00000640900 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
SCARB2-225ENST00000640900 PALLDQ8WX93 1383 aa11.8□□□□□ -0.52
SCARB2-225ENST00000640900 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
SCARB2-225ENST00000640900 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-225ENST00000640900 C5P01031 1676 aa11.8□□□□□ -0.52
SCARB2-225ENST00000640900 TJP1Q07157 1748 aa11.8□□□□□ -0.52
SCARB2-225ENST00000640900 LOC102724428A0A0B4J2F2 783 aa11.79□□□□□ -0.52
SCARB2-225ENST00000640900 SIK1P57059 783 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms