RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
SCARB2-224ENST00000640880 VASH1Q7L8A9 365 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-224ENST00000640880 RNF166Q96A37 237 aaPredicted RBP10.35□□□□□ -0.75
SCARB2-224ENST00000640880 VTI1AQ96AJ9 217 aa10.35□□□□□ -0.75
SCARB2-224ENST00000640880 CC2D2AQ9P2K1 1620 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 BACH1O14867 736 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 P4HBP07237 508 aaKnown RBP10.34□□□□□ -0.75
SCARB2-224ENST00000640880 NPR3P17342 541 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 MPSTP25325 297 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 SCNN1DP51172 638 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 GDF10P55107 478 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 ERVK-9P63128 1117 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 CC2D2BQ6DHV5 1058 aa10.34□□□□□ -0.75
SCARB2-224ENST00000640880 TMC7Q7Z402 723 aa10.33□□□□□ -0.76
SCARB2-224ENST00000640880 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
SCARB2-224ENST00000640880 C8orf37Q96NL8 207 aa10.33□□□□□ -0.76
SCARB2-224ENST00000640880 RBCK1Q9BYM8 510 aa10.33□□□□□ -0.76
SCARB2-224ENST00000640880 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
SCARB2-224ENST00000640880 ATAD2Q6PL18 1390 aa10.33□□□□□ -0.76
SCARB2-224ENST00000640880 NDUFB5O43674 189 aa10.32□□□□□ -0.76
SCARB2-224ENST00000640880 TSPAN10Q9H1Z9 355 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-224ENST00000640880 OSBPL3Q9H4L5 887 aa10.32□□□□□ -0.76
SCARB2-224ENST00000640880 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
SCARB2-224ENST00000640880 WASLO00401 505 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-224ENST00000640880 ZBTB24O43167 697 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-224ENST00000640880 VARSP26640 1264 aaKnown RBP10.31□□□□□ -0.76
SCARB2-224ENST00000640880 PTPN5P54829 565 aa10.31□□□□□ -0.76
SCARB2-224ENST00000640880 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
SCARB2-224ENST00000640880 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
SCARB2-224ENST00000640880 EPHA4P54764 986 aa10.3□□□□□ -0.76
SCARB2-224ENST00000640880 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
SCARB2-224ENST00000640880 C16orf46Q6P387 395 aa10.3□□□□□ -0.76
SCARB2-224ENST00000640880 SAP130Q9H0E3 1048 aa10.3□□□□□ -0.76
SCARB2-224ENST00000640880 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
SCARB2-224ENST00000640880 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
SCARB2-224ENST00000640880 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
SCARB2-224ENST00000640880 INHAP05111 366 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 TRIM32Q13049 653 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 ARID5BQ14865 1188 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 TMC1Q8TDI8 760 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 SREK1Q8WXA9 508 aaKnown RBP10.29□□□□□ -0.76
SCARB2-224ENST00000640880 ETNK1Q9HBU6 452 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 SMARCA4P51532 1647 aa10.29□□□□□ -0.76
SCARB2-224ENST00000640880 TREHO43280 583 aa10.28□□□□□ -0.76
SCARB2-224ENST00000640880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
SCARB2-224ENST00000640880 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 FSHRP23945 695 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 SKOR1P84550 965 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 FMR1Q06787 632 aaKnown RBP eCLIP10.27□□□□□ -0.77
SCARB2-224ENST00000640880 AAMPQ13685 434 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 MRPL58Q14197 206 aaKnown RBP10.27□□□□□ -0.77
SCARB2-224ENST00000640880 DRC1Q96MC2 740 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 BACH2Q9BYV9 841 aa10.27□□□□□ -0.77
SCARB2-224ENST00000640880 EIF1AXP47813 144 aaKnown RBP10.26□□□□□ -0.77
SCARB2-224ENST00000640880 WNT7BP56706 349 aa10.26□□□□□ -0.77
SCARB2-224ENST00000640880 TBCELQ5QJ74 424 aa10.26□□□□□ -0.77
SCARB2-224ENST00000640880 TRIM52Q96A61 297 aa10.26□□□□□ -0.77
SCARB2-224ENST00000640880 DHX9Q08211 1270 aaKnown RBP10.25□□□□□ -0.77
SCARB2-224ENST00000640880 ALKBH2Q6NS38 261 aa10.25□□□□□ -0.77
SCARB2-224ENST00000640880 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
SCARB2-224ENST00000640880 ZNF784Q8NCA9 323 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-224ENST00000640880 SLC4A9Q96Q91 983 aa10.25□□□□□ -0.77
SCARB2-224ENST00000640880 CITED4Q96RK1 184 aa10.25□□□□□ -0.77
SCARB2-224ENST00000640880 CCDC87Q9NVE4 849 aa10.25□□□□□ -0.77
SCARB2-224ENST00000640880 CECR2Q9BXF3 1484 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 FZD6O60353 706 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 ERCC5P28715 1186 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-224ENST00000640880 MAPK8P45983 427 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 COX20Q5RI15 118 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 CYP2U1Q7Z449 544 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
SCARB2-224ENST00000640880 STIM2Q9P246 746 aa10.24□□□□□ -0.77
SCARB2-224ENST00000640880 TNFRSF10BO14763 440 aa10.23□□□□□ -0.77
SCARB2-224ENST00000640880 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
SCARB2-224ENST00000640880 FOXK2Q01167 660 aa10.23□□□□□ -0.77
SCARB2-224ENST00000640880 XPCQ01831 940 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-224ENST00000640880 PLCB3Q01970 1234 aa10.23□□□□□ -0.77
SCARB2-224ENST00000640880 C2orf49Q9BVC5 232 aaPredicted RBP10.23□□□□□ -0.77
SCARB2-224ENST00000640880 SMARCA2P51531 1590 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 A6NJY4 79 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 SCAMP3O14828 347 aaKnown RBP10.22□□□□□ -0.77
SCARB2-224ENST00000640880 GNRH1P01148 92 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 DSC3Q14574 896 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 ESCO1Q5FWF5 840 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 STAG2Q8N3U4 1231 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 DMRTB1Q96MA1 342 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 CDK15Q96Q40 435 aa10.22□□□□□ -0.77
SCARB2-224ENST00000640880 PRPF40AO75400 957 aaKnown RBP10.21□□□□□ -0.77
SCARB2-224ENST00000640880 GRM5P41594 1212 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 FGD1P98174 961 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.77
SCARB2-224ENST00000640880 MYT1Q01538 1121 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 EHHADHQ08426 723 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
SCARB2-224ENST00000640880 FAM161BQ96MY7 647 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms