RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 ZBTB7AO95365 584 aa16.65■□□□□ 0.26
PAX6-272ENST00000640460 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
PAX6-272ENST00000640460 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
PAX6-272ENST00000640460 HSP90AB1P08238 724 aaKnown RBP16.65■□□□□ 0.26
PAX6-272ENST00000640460 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
PAX6-272ENST00000640460 COL24A1Q17RW2 1714 aa16.64■□□□□ 0.25
PAX6-272ENST00000640460 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
PAX6-272ENST00000640460 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
PAX6-272ENST00000640460 ASAP1Q9ULH1 1129 aa16.64■□□□□ 0.25
PAX6-272ENST00000640460 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
PAX6-272ENST00000640460 C1orf141Q5JVX7 400 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 ADAMTS8Q9UP79 889 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 UBR3Q6ZT12 1888 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
PAX6-272ENST00000640460 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
PAX6-272ENST00000640460 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
PAX6-272ENST00000640460 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
PAX6-272ENST00000640460 PTGER2P43116 358 aa16.62■□□□□ 0.25
PAX6-272ENST00000640460 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
PAX6-272ENST00000640460 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
PAX6-272ENST00000640460 COL5A3P25940 1745 aaPredicted RBP16.6■□□□□ 0.25
PAX6-272ENST00000640460 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
PAX6-272ENST00000640460 SIK1P57059 783 aa16.6■□□□□ 0.25
PAX6-272ENST00000640460 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
PAX6-272ENST00000640460 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
PAX6-272ENST00000640460 CABP4P57796 275 aa16.59■□□□□ 0.25
PAX6-272ENST00000640460 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
PAX6-272ENST00000640460 MRC1P22897 1456 aa16.59■□□□□ 0.25
PAX6-272ENST00000640460 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
PAX6-272ENST00000640460 SGIP1Q9BQI5 828 aa16.59■□□□□ 0.25
PAX6-272ENST00000640460 MAP3K5Q99683 1374 aa16.58■□□□□ 0.24
PAX6-272ENST00000640460 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
PAX6-272ENST00000640460 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.24
PAX6-272ENST00000640460 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 GNAT3A8MTJ3 354 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 NEFMP07197 916 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 ITPK1Q13572 414 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 SLC4A9Q96Q91 983 aa16.57■□□□□ 0.24
PAX6-272ENST00000640460 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
PAX6-272ENST00000640460 TJP1Q07157 1748 aa16.56■□□□□ 0.24
PAX6-272ENST00000640460 AMIGO3Q86WK7 504 aa16.56■□□□□ 0.24
PAX6-272ENST00000640460 COL23A1Q86Y22 540 aaPredicted RBP16.56■□□□□ 0.24
PAX6-272ENST00000640460 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
PAX6-272ENST00000640460 RNMTO43148 476 aaKnown RBP16.56■□□□□ 0.24
PAX6-272ENST00000640460 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
PAX6-272ENST00000640460 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
PAX6-272ENST00000640460 MYH14Q7Z406 1995 aaKnown RBP16.55■□□□□ 0.24
PAX6-272ENST00000640460 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
PAX6-272ENST00000640460 IL17REQ8NFR9 667 aa16.55■□□□□ 0.24
PAX6-272ENST00000640460 RUNDC1Q96C34 613 aa16.55■□□□□ 0.24
PAX6-272ENST00000640460 HMGB2P26583 209 aaKnown RBP16.54■□□□□ 0.24
PAX6-272ENST00000640460 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
PAX6-272ENST00000640460 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
PAX6-272ENST00000640460 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
PAX6-272ENST00000640460 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
PAX6-272ENST00000640460 AK7Q96M32 723 aa16.53■□□□□ 0.24
PAX6-272ENST00000640460 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
PAX6-272ENST00000640460 ZBED9Q6R2W3 1325 aa16.53■□□□□ 0.24
PAX6-272ENST00000640460 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
PAX6-272ENST00000640460 MSH5O43196 834 aa16.52■□□□□ 0.24
PAX6-272ENST00000640460 TMPOP42166 694 aaKnown RBP16.52■□□□□ 0.24
PAX6-272ENST00000640460 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
PAX6-272ENST00000640460 MCM10Q7L590 875 aa16.52■□□□□ 0.24
PAX6-272ENST00000640460 RRP7AQ9Y3A4 280 aaKnown RBP16.52■□□□□ 0.24
PAX6-272ENST00000640460 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
PAX6-272ENST00000640460 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
PAX6-272ENST00000640460 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
PAX6-272ENST00000640460 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
PAX6-272ENST00000640460 RIPK4P57078 832 aa16.5■□□□□ 0.23
PAX6-272ENST00000640460 RTF1Q92541 710 aaKnown RBP16.5■□□□□ 0.23
PAX6-272ENST00000640460 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
PAX6-272ENST00000640460 PHF14O94880 888 aa16.5■□□□□ 0.23
PAX6-272ENST00000640460 FLAD1Q8NFF5 587 aa16.5■□□□□ 0.23
PAX6-272ENST00000640460 ARXQ96QS3 562 aa16.5■□□□□ 0.23
PAX6-272ENST00000640460 FHDC1Q9C0D6 1143 aaPredicted RBP16.5■□□□□ 0.23
PAX6-272ENST00000640460 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.49■□□□□ 0.23
PAX6-272ENST00000640460 APAF1O14727 1248 aa16.49■□□□□ 0.23
PAX6-272ENST00000640460 GNPATO15228 680 aa16.49■□□□□ 0.23
PAX6-272ENST00000640460 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
PAX6-272ENST00000640460 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
PAX6-272ENST00000640460 SSFA2P28290 1259 aa16.48■□□□□ 0.23
PAX6-272ENST00000640460 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
PAX6-272ENST00000640460 TEFQ10587 303 aa16.48■□□□□ 0.23
PAX6-272ENST00000640460 SYT17Q9BSW7 474 aa16.48■□□□□ 0.23
PAX6-272ENST00000640460 THUMPD2Q9BTF0 503 aaKnown RBP16.48■□□□□ 0.23
PAX6-272ENST00000640460 CNTNAP4Q9C0A0 1308 aa16.47■□□□□ 0.23
PAX6-272ENST00000640460 POLD1P28340 1107 aa16.47■□□□□ 0.23
PAX6-272ENST00000640460 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
PAX6-272ENST00000640460 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
PAX6-272ENST00000640460 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
PAX6-272ENST00000640460 CRKLP46109 303 aaKnown RBP16.44■□□□□ 0.22
PAX6-272ENST00000640460 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
PAX6-272ENST00000640460 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
PAX6-272ENST00000640460 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
PAX6-272ENST00000640460 BTBD11A6QL63 1104 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms