RNA–Protein interactions for RNA: ENST00000640335.1

PAX6-269, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-269ENST00000640335 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
PAX6-269ENST00000640335 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
PAX6-269ENST00000640335 HMOX1P09601 288 aa20.7■□□□□ 0.9
PAX6-269ENST00000640335 ITPK1Q13572 414 aa20.7■□□□□ 0.9
PAX6-269ENST00000640335 LINC00116Q8NCU8 138 aa20.7■□□□□ 0.9
PAX6-269ENST00000640335 AKAP4Q5JQC9 854 aa20.69■□□□□ 0.9
PAX6-269ENST00000640335 NFATC2IPQ8NCF5 419 aa20.69■□□□□ 0.9
PAX6-269ENST00000640335 UBR3Q6ZT12 1888 aa20.69■□□□□ 0.9
PAX6-269ENST00000640335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
PAX6-269ENST00000640335 SSFA2P28290 1259 aa20.67■□□□□ 0.9
PAX6-269ENST00000640335 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
PAX6-269ENST00000640335 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
PAX6-269ENST00000640335 AMIGO3Q86WK7 504 aa20.66■□□□□ 0.9
PAX6-269ENST00000640335 SLC4A9Q96Q91 983 aa20.66■□□□□ 0.9
PAX6-269ENST00000640335 RBM42Q9BTD8 480 aaKnown RBP20.66■□□□□ 0.9
PAX6-269ENST00000640335 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
PAX6-269ENST00000640335 KLHL34Q8N239 644 aa20.65■□□□□ 0.9
PAX6-269ENST00000640335 GNPATO15228 680 aa20.64■□□□□ 0.89
PAX6-269ENST00000640335 PHF14O94880 888 aa20.64■□□□□ 0.89
PAX6-269ENST00000640335 YY1P25490 414 aa20.64■□□□□ 0.89
PAX6-269ENST00000640335 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
PAX6-269ENST00000640335 RC3H1Q5TC82 1133 aaKnown RBP20.64■□□□□ 0.89
PAX6-269ENST00000640335 COL3A1P02461 1466 aaPredicted RBP20.63■□□□□ 0.89
PAX6-269ENST00000640335 U2SURPO15042 1029 aaKnown RBP20.63■□□□□ 0.89
PAX6-269ENST00000640335 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
PAX6-269ENST00000640335 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
PAX6-269ENST00000640335 RNMTO43148 476 aaKnown RBP20.62■□□□□ 0.89
PAX6-269ENST00000640335 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
PAX6-269ENST00000640335 SLC52A2Q9HAB3 445 aa20.62■□□□□ 0.89
PAX6-269ENST00000640335 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
PAX6-269ENST00000640335 RTCBQ9Y3I0 505 aaKnown RBP20.61■□□□□ 0.89
PAX6-269ENST00000640335 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
PAX6-269ENST00000640335 TRAPPC3LQ5T215 181 aa20.6■□□□□ 0.89
PAX6-269ENST00000640335 CNTNAP4Q9C0A0 1308 aa20.59■□□□□ 0.89
PAX6-269ENST00000640335 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
PAX6-269ENST00000640335 CD2APQ9Y5K6 639 aa20.59■□□□□ 0.89
PAX6-269ENST00000640335 COL5A3P25940 1745 aaPredicted RBP20.58■□□□□ 0.89
PAX6-269ENST00000640335 RPS6KA4O75676 772 aa20.58■□□□□ 0.89
PAX6-269ENST00000640335 ADRA2BP18089 450 aa20.58■□□□□ 0.89
PAX6-269ENST00000640335 GPR162Q16538 588 aa20.58■□□□□ 0.89
PAX6-269ENST00000640335 NLGN2Q8NFZ4 835 aa20.58■□□□□ 0.89
PAX6-269ENST00000640335 NUDCQ9Y266 331 aa20.58■□□□□ 0.89
PAX6-269ENST00000640335 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
PAX6-269ENST00000640335 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
PAX6-269ENST00000640335 CHD4Q14839 1912 aa20.57■□□□□ 0.88
PAX6-269ENST00000640335 ADAMTS7Q9UKP4 1686 aa20.55■□□□□ 0.88
PAX6-269ENST00000640335 ARHGEF1Q92888 912 aaKnown RBP20.55■□□□□ 0.88
PAX6-269ENST00000640335 GNAT3A8MTJ3 354 aa20.54■□□□□ 0.88
PAX6-269ENST00000640335 NLGN1Q8N2Q7 840 aa20.54■□□□□ 0.88
PAX6-269ENST00000640335 MRC1P22897 1456 aa20.54■□□□□ 0.88
PAX6-269ENST00000640335 RFC4P35249 363 aa20.53■□□□□ 0.88
PAX6-269ENST00000640335 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
PAX6-269ENST00000640335 SLC39A6Q13433 755 aa20.53■□□□□ 0.88
PAX6-269ENST00000640335 RSPH6AQ9H0K4 717 aa20.53■□□□□ 0.88
PAX6-269ENST00000640335 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
PAX6-269ENST00000640335 CICQ96RK0 1608 aaPredicted RBP20.52■□□□□ 0.88
PAX6-269ENST00000640335 FCHSD2O94868 740 aa20.51■□□□□ 0.87
PAX6-269ENST00000640335 U2AF1L5P0DN76 240 aaPredicted RBP20.51■□□□□ 0.87
PAX6-269ENST00000640335 PRKAR2BP31323 418 aa20.51■□□□□ 0.87
PAX6-269ENST00000640335 U2AF1Q01081 240 aaKnown RBP eCLIP20.51■□□□□ 0.87
PAX6-269ENST00000640335 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
PAX6-269ENST00000640335 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
PAX6-269ENST00000640335 TJP1Q07157 1748 aa20.5■□□□□ 0.87
PAX6-269ENST00000640335 GRIN3BO60391 1043 aa20.5■□□□□ 0.87
PAX6-269ENST00000640335 DNAJC10Q8IXB1 793 aa20.5■□□□□ 0.87
PAX6-269ENST00000640335 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
PAX6-269ENST00000640335 MMP10P09238 476 aa20.49■□□□□ 0.87
PAX6-269ENST00000640335 TEFQ10587 303 aa20.49■□□□□ 0.87
PAX6-269ENST00000640335 INTS5Q6P9B9 1019 aaKnown RBP20.49■□□□□ 0.87
PAX6-269ENST00000640335 GYS1P13807 737 aa20.48■□□□□ 0.87
PAX6-269ENST00000640335 CCDC87Q9NVE4 849 aa20.48■□□□□ 0.87
PAX6-269ENST00000640335 CYP19A1P11511 503 aaPredicted RBP20.47■□□□□ 0.87
PAX6-269ENST00000640335 YBX3P16989 372 aaKnown RBP eCLIP20.47■□□□□ 0.87
PAX6-269ENST00000640335 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
PAX6-269ENST00000640335 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
PAX6-269ENST00000640335 C4AP0C0L4 1744 aa20.45■□□□□ 0.86
PAX6-269ENST00000640335 UBR2Q8IWV8 1755 aa20.45■□□□□ 0.86
PAX6-269ENST00000640335 ZNF790Q6PG37 636 aa20.45■□□□□ 0.86
PAX6-269ENST00000640335 CEMIPQ8WUJ3 1361 aa20.45■□□□□ 0.86
PAX6-269ENST00000640335 UTRNP46939 3433 aa20.44■□□□□ 0.86
PAX6-269ENST00000640335 SIPA1L3O60292 1781 aaPredicted RBP20.44■□□□□ 0.86
PAX6-269ENST00000640335 STARD3NLO95772 234 aa20.43■□□□□ 0.86
PAX6-269ENST00000640335 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
PAX6-269ENST00000640335 PARP3Q9Y6F1 533 aa20.43■□□□□ 0.86
PAX6-269ENST00000640335 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
PAX6-269ENST00000640335 USP42Q9H9J4 1324 aaKnown RBP20.43■□□□□ 0.86
PAX6-269ENST00000640335 ZPR1O75312 459 aa20.42■□□□□ 0.86
PAX6-269ENST00000640335 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
PAX6-269ENST00000640335 RTF1Q92541 710 aaKnown RBP20.42■□□□□ 0.86
PAX6-269ENST00000640335 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
PAX6-269ENST00000640335 SRP68Q9UHB9 627 aaKnown RBP20.42■□□□□ 0.86
PAX6-269ENST00000640335 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
PAX6-269ENST00000640335 TGFB2P61812 414 aa20.41■□□□□ 0.86
PAX6-269ENST00000640335 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
PAX6-269ENST00000640335 BTBD11A6QL63 1104 aa20.4■□□□□ 0.86
PAX6-269ENST00000640335 NEFMP07197 916 aa20.4■□□□□ 0.86
PAX6-269ENST00000640335 FKBP8Q14318 412 aa20.4■□□□□ 0.86
PAX6-269ENST00000640335 RALBP1Q15311 655 aa20.4■□□□□ 0.86
PAX6-269ENST00000640335 HEG1Q9ULI3 1381 aa20.4■□□□□ 0.86
PAX6-269ENST00000640335 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms