RNA–Protein interactions for RNA: ENST00000640187.1

SPIN3-237, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-237ENST00000640187 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
SPIN3-237ENST00000640187 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
SPIN3-237ENST00000640187 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
SPIN3-237ENST00000640187 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
SPIN3-237ENST00000640187 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
SPIN3-237ENST00000640187 TEFQ10587 303 aa16.34■□□□□ 0.21
SPIN3-237ENST00000640187 FLIIQ13045 1269 aa16.34■□□□□ 0.21
SPIN3-237ENST00000640187 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
SPIN3-237ENST00000640187 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
SPIN3-237ENST00000640187 RNMTO43148 476 aaKnown RBP16.34■□□□□ 0.21
SPIN3-237ENST00000640187 EIF4A1P60842 406 aaKnown RBP16.34■□□□□ 0.21
SPIN3-237ENST00000640187 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
SPIN3-237ENST00000640187 NCAPD2Q15021 1401 aa16.33■□□□□ 0.21
SPIN3-237ENST00000640187 BTBD11A6QL63 1104 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 SLC4A3P48751 1232 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
SPIN3-237ENST00000640187 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
SPIN3-237ENST00000640187 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
SPIN3-237ENST00000640187 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
SPIN3-237ENST00000640187 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
SPIN3-237ENST00000640187 GCC1Q96CN9 775 aa16.31■□□□□ 0.2
SPIN3-237ENST00000640187 ANXA1P04083 346 aa16.3■□□□□ 0.2
SPIN3-237ENST00000640187 CEP85Q6P2H3 762 aa16.3■□□□□ 0.2
SPIN3-237ENST00000640187 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
SPIN3-237ENST00000640187 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
SPIN3-237ENST00000640187 ANKRD44Q8N8A2 993 aa16.29■□□□□ 0.2
SPIN3-237ENST00000640187 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
SPIN3-237ENST00000640187 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
SPIN3-237ENST00000640187 LMO7Q8WWI1 1683 aa16.29■□□□□ 0.2
SPIN3-237ENST00000640187 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
SPIN3-237ENST00000640187 COL18A1P39060 1754 aa16.28■□□□□ 0.2
SPIN3-237ENST00000640187 APBB1O00213 710 aa16.27■□□□□ 0.2
SPIN3-237ENST00000640187 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
SPIN3-237ENST00000640187 CHPF2Q9P2E5 772 aa16.27■□□□□ 0.2
SPIN3-237ENST00000640187 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
SPIN3-237ENST00000640187 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.19
SPIN3-237ENST00000640187 RPAP2Q8IXW5 612 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-237ENST00000640187 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-237ENST00000640187 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
SPIN3-237ENST00000640187 SLC39A6Q13433 755 aa16.26■□□□□ 0.19
SPIN3-237ENST00000640187 MEGF6O75095 1541 aa16.26■□□□□ 0.19
SPIN3-237ENST00000640187 DAXXQ9UER7 740 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-237ENST00000640187 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-237ENST00000640187 EIF5BO60841 1220 aaKnown RBP16.25■□□□□ 0.19
SPIN3-237ENST00000640187 SOS2Q07890 1332 aaPredicted RBP16.25■□□□□ 0.19
SPIN3-237ENST00000640187 KDM3BQ7LBC6 1761 aa16.25■□□□□ 0.19
SPIN3-237ENST00000640187 SMARCA5O60264 1052 aaPredicted RBP16.24■□□□□ 0.19
SPIN3-237ENST00000640187 PHKG2P15735 406 aa16.24■□□□□ 0.19
SPIN3-237ENST00000640187 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
SPIN3-237ENST00000640187 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
SPIN3-237ENST00000640187 PRDM11Q9NQV5 511 aa16.23■□□□□ 0.19
SPIN3-237ENST00000640187 CYP27B1O15528 508 aa16.23■□□□□ 0.19
SPIN3-237ENST00000640187 PROSER3Q2NL68 480 aa16.23■□□□□ 0.19
SPIN3-237ENST00000640187 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
SPIN3-237ENST00000640187 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
SPIN3-237ENST00000640187 USP44Q9H0E7 712 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 CRYBG1Q9Y4K1 1723 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 CPDO75976 1380 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 PI4KAP2A4QPH2 592 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 GNAI2P04899 355 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 PI4KAP1Q8N8J0 262 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
SPIN3-237ENST00000640187 KDM6AO15550 1401 aaPredicted RBP16.22■□□□□ 0.19
SPIN3-237ENST00000640187 HOXB7P09629 217 aa16.21■□□□□ 0.19
SPIN3-237ENST00000640187 PNMA6EA0A0J9YXQ4 647 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 PLEKHM2Q8IWE5 1019 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 TBC1D32Q96NH3 1257 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 SLC52A2Q9HAB3 445 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
SPIN3-237ENST00000640187 HEG1Q9ULI3 1381 aa16.2■□□□□ 0.18
SPIN3-237ENST00000640187 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
SPIN3-237ENST00000640187 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
SPIN3-237ENST00000640187 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
SPIN3-237ENST00000640187 TOM1L2Q6ZVM7 507 aa16.19■□□□□ 0.18
SPIN3-237ENST00000640187 EXOC6BQ9Y2D4 811 aa16.19■□□□□ 0.18
SPIN3-237ENST00000640187 GNAI3P08754 354 aa16.18■□□□□ 0.18
SPIN3-237ENST00000640187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■□□□□ 10.8
SPIN3-237ENST00000640187 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
SPIN3-237ENST00000640187 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
SPIN3-237ENST00000640187 GSPT1P15170 499 aaKnown RBP16.18■□□□□ 0.18
SPIN3-237ENST00000640187 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
SPIN3-237ENST00000640187 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
SPIN3-237ENST00000640187 SRCIN1Q9C0H9 1055 aa16.17■□□□□ 0.18
SPIN3-237ENST00000640187 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-237ENST00000640187 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-237ENST00000640187 BEND3Q5T5X7 828 aa16.17■□□□□ 0.18
SPIN3-237ENST00000640187 WDR17Q8IZU2 1322 aa16.17■□□□□ 0.18
SPIN3-237ENST00000640187 HMMRO75330 724 aa16.16■□□□□ 0.18
SPIN3-237ENST00000640187 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-237ENST00000640187 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
SPIN3-237ENST00000640187 ZNF496Q96IT1 587 aaPredicted RBP16.16■□□□□ 0.18
SPIN3-237ENST00000640187 ADCY9O60503 1353 aa16.16■□□□□ 0.18
SPIN3-237ENST00000640187 AIMP1Q12904 312 aaKnown RBP16.16■□□□□ 0.18
SPIN3-237ENST00000640187 C22orf23Q9BZE7 217 aa16.16■□□□□ 0.18
SPIN3-237ENST00000640187 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms