RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	SLC39A6	Q13433	755 aa		13.4	□□□□□ -0.26
NECAP1-223	ENST00000640091	LRRC37A3	O60309	1634 aa		13.4	□□□□□ -0.26
NECAP1-223	ENST00000640091	ATF7IP	Q6VMQ6	1270 aa		13.4	□□□□□ -0.26
NECAP1-223	ENST00000640091	SPATA31A1	Q5TZJ5	1347 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	HSP90AB1	P08238	724 aa	Known RBP	13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	CABP4	P57796	275 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	UNC5CL	Q8IV45	518 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	CCDC136	Q96JN2	1154 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	SPATA31A6	Q5VVP1	1343 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	SLC4A2	P04920	1241 aa		13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	FTSJ3	Q8IY81	847 aa	Known RBP	13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	DZIP1L	Q8IYY4	767 aa	Known RBP	13.39	□□□□□ -0.27
NECAP1-223	ENST00000640091	SLIT2	O94813	1529 aa		13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	EXOC5	O00471	708 aa		13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	IPO8	O15397	1037 aa	Known RBP	13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	EIF2S2	P20042	333 aa	Known RBP	13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	BRPF1	P55201	1214 aa	Predicted RBP	13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	KIF16B	Q96L93	1317 aa		13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	PLEKHG2	Q9H7P9	1386 aa		13.38	□□□□□ -0.27
NECAP1-223	ENST00000640091	MEX3C	Q5U5Q3	659 aa	Known RBP	13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	PLCH1	Q4KWH8	1693 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	SPATA31A5	Q5VU36	1347 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	SPATA31A7	Q8IWB4	1347 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	LRP6	O75581	1613 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	PRAMEF22	A3QJZ6	481 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	NKX1-1	Q15270	411 aa	Predicted RBP	13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	ZNF790	Q6PG37	636 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	PKD1L3	Q7Z443	1732 aa		13.37	□□□□□ -0.27
NECAP1-223	ENST00000640091	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	USP21	Q9UK80	565 aa		13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	BCL9L	Q86UU0	1499 aa		13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	PARP4	Q9UKK3	1724 aa	Known RBP	13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	DISP2	A7MBM2	1401 aa		13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	G2E3	Q7L622	706 aa		13.36	□□□□□ -0.27
NECAP1-223	ENST00000640091	HDGFL1	Q5TGJ6	251 aa		13.35	□□□□□ -0.27
NECAP1-223	ENST00000640091	CCDC30	Q5VVM6	783 aa		13.35	□□□□□ -0.27
NECAP1-223	ENST00000640091	TMEM57	Q8N5G2	664 aa		13.35	□□□□□ -0.27
NECAP1-223	ENST00000640091	THRAP3	Q9Y2W1	955 aa	Known RBP	13.35	□□□□□ -0.27
NECAP1-223	ENST00000640091	ERVV-2	B6SEH9	535 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	GIGYF1	O75420	1035 aa	Predicted RBP	13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	DDB1	Q16531	1140 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	FAM98C	Q17RN3	349 aa	Known RBP	13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	ITPRIP	Q8IWB1	547 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	STK31	Q9BXU1	1019 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	MVP	Q14764	893 aa	Known RBP	13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	ARHGAP45	Q92619	1136 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	ZNF496	Q96IT1	587 aa	Predicted RBP	13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	ADAMTS7	Q9UKP4	1686 aa		13.34	□□□□□ -0.27
NECAP1-223	ENST00000640091	MS4A1	P11836	297 aa		13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	VPS72	Q15906	364 aa		13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	TTC5	Q8N0Z6	440 aa		13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	NRAP	Q86VF7	1730 aa		13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	SCN11A	Q9UI33	1791 aa		13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	VIRMA	Q69YN4	1812 aa	Known RBP	13.33	□□□□□ -0.28
NECAP1-223	ENST00000640091	ANXA1	P04083	346 aa		13.32	□□□□□ -0.28
NECAP1-223	ENST00000640091	BARGIN	Q6ZT62	677 aa		13.32	□□□□□ -0.28
NECAP1-223	ENST00000640091	SYTL4	Q96C24	671 aa	Predicted RBP	13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	PHAX	Q9H814	394 aa	Known RBP	13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	CHPF2	Q9P2E5	772 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	HEG1	Q9ULI3	1381 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	KDM3B	Q7LBC6	1761 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	AFF2	P51816	1311 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	SOS1	Q07889	1333 aa	Predicted RBP	13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091		A0A0G2JS52	829 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091		F6X3S4	739 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	HOXB7	P09629	217 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	API5	Q9BZZ5	524 aa	Known RBP	13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	TMOD3	Q9NYL9	352 aa		13.31	□□□□□ -0.28
NECAP1-223	ENST00000640091	SHANK3	Q9BYB0	1731 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	PTCD1	O75127	700 aa	Known RBP	13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	MARCH10	Q8NA82	808 aa	Predicted RBP	13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	PIGB	Q92521	554 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	USP16	Q9Y5T5	823 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	NWD2	Q9ULI1	1742 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	FLII	Q13045	1269 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	FMNL2	Q96PY5	1086 aa		13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	SIPA1L3	O60292	1781 aa	Predicted RBP	13.3	□□□□□ -0.28
NECAP1-223	ENST00000640091	MRC1	P22897	1456 aa		13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	PTPRC	P08575	1304 aa		13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	FKBP5	Q13451	457 aa	Predicted RBP	13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	ASAP1	Q9ULH1	1129 aa		13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	DDX19B	Q9UMR2	479 aa		13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	ABCC4	O15439	1325 aa		13.29	□□□□□ -0.28
NECAP1-223	ENST00000640091	SNRPA1	P09661	255 aa	Known RBP	13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	PRIM1	P49642	420 aa	Known RBP	13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	PROSER3	Q2NL68	480 aa		13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	SLC4A10	Q6U841	1118 aa		13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	ACSBG1	Q96GR2	724 aa		13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	PCDHB15	Q9Y5E8	787 aa		13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	TNS2	Q63HR2	1409 aa		13.28	□□□□□ -0.28
NECAP1-223	ENST00000640091	ZBTB7B	O15156	539 aa	Predicted RBP	13.27	□□□□□ -0.28
NECAP1-223	ENST00000640091	PIP4K2A	P48426	406 aa	Predicted RBP	13.27	□□□□□ -0.28
NECAP1-223	ENST00000640091	GJD4	Q96KN9	370 aa	Predicted RBP	13.27	□□□□□ -0.28
NECAP1-223	ENST00000640091	DBF4	Q9UBU7	674 aa	Predicted RBP	13.27	□□□□□ -0.28
NECAP1-223	ENST00000640091	RGS12	O14924	1447 aa		13.27	□□□□□ -0.29
NECAP1-223	ENST00000640091	IGHD	P01880	384 aa		13.26	□□□□□ -0.29
NECAP1-223	ENST00000640091	MYL6B	P14649	208 aa		13.26	□□□□□ -0.29
NECAP1-223	ENST00000640091	PDIA6	Q15084	440 aa		13.26	□□□□□ -0.29
NECAP1-223	ENST00000640091	CHMP4A	Q9BY43	222 aa		13.26	□□□□□ -0.29

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