RNA–Protein interactions for RNA: ENST00000640043.1

MCF2L2-214, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 5

Gene MCF2L2, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-214ENST00000640043 RIOK3O14730 519 aaKnown RBP12.99□□□□□ -0.33
MCF2L2-214ENST00000640043 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
MCF2L2-214ENST00000640043 ZCRB1Q8TBF4 217 aaKnown RBP12.98□□□□□ -0.33
MCF2L2-214ENST00000640043 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
MCF2L2-214ENST00000640043 C5P01031 1676 aa12.97□□□□□ -0.33
MCF2L2-214ENST00000640043 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
MCF2L2-214ENST00000640043 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 RTL1A6NKG5 1358 aa12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 COL23A1Q86Y22 540 aaPredicted RBP12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
MCF2L2-214ENST00000640043 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
MCF2L2-214ENST00000640043 TMC1Q8TDI8 760 aa12.94□□□□□ -0.34
MCF2L2-214ENST00000640043 COG3Q96JB2 828 aa12.94□□□□□ -0.34
MCF2L2-214ENST00000640043 HOXC9P31274 260 aa12.93□□□□□ -0.34
MCF2L2-214ENST00000640043 KCNQ4P56696 695 aa12.93□□□□□ -0.34
MCF2L2-214ENST00000640043 FLIIQ13045 1269 aa12.93□□□□□ -0.34
MCF2L2-214ENST00000640043 CCDC82Q8N4S0 544 aa12.93□□□□□ -0.34
MCF2L2-214ENST00000640043 MEGF6O75095 1541 aa12.93□□□□□ -0.34
MCF2L2-214ENST00000640043 TESPA1A2RU30 521 aaPredicted RBP12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 GSE1Q14687 1217 aa12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 AK7Q96M32 723 aa12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
MCF2L2-214ENST00000640043 MAP3K19Q56UN5 1328 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 AMPHP49418 695 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 LTV1Q96GA3 475 aaPredicted RBP12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 MTMR7Q9Y216 660 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
MCF2L2-214ENST00000640043 APLP1P51693 650 aa12.9□□□□□ -0.34
MCF2L2-214ENST00000640043 POLA2Q14181 598 aa12.9□□□□□ -0.34
MCF2L2-214ENST00000640043 TMCO4Q5TGY1 634 aa12.9□□□□□ -0.34
MCF2L2-214ENST00000640043 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
MCF2L2-214ENST00000640043 C4BP0C0L5 1744 aa12.9□□□□□ -0.34
MCF2L2-214ENST00000640043 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
MCF2L2-214ENST00000640043 ITGB4P16144 1822 aa12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 SSFA2P28290 1259 aa12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 KDM4CQ9H3R0 1056 aa12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
MCF2L2-214ENST00000640043 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
MCF2L2-214ENST00000640043 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
MCF2L2-214ENST00000640043 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
MCF2L2-214ENST00000640043 KIF13BQ9NQT8 1826 aa12.87□□□□□ -0.35
MCF2L2-214ENST00000640043 INSRP06213 1382 aa12.86□□□□□ -0.35
MCF2L2-214ENST00000640043 KIF3CO14782 793 aa12.86□□□□□ -0.35
MCF2L2-214ENST00000640043 TOMM70O94826 608 aa12.86□□□□□ -0.35
MCF2L2-214ENST00000640043 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
MCF2L2-214ENST00000640043 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
MCF2L2-214ENST00000640043 SMYD5Q6GMV2 418 aa12.85□□□□□ -0.35
MCF2L2-214ENST00000640043 SIN3AQ96ST3 1273 aa12.85□□□□□ -0.35
MCF2L2-214ENST00000640043 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
MCF2L2-214ENST00000640043 FLT4P35916 1363 aa12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 ZNF526Q8TF50 670 aaPredicted RBP12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
MCF2L2-214ENST00000640043 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
MCF2L2-214ENST00000640043 A6NJR5 290 aa12.83□□□□□ -0.36
MCF2L2-214ENST00000640043 SEMA3EO15041 775 aa12.83□□□□□ -0.36
MCF2L2-214ENST00000640043 TGFB2P61812 414 aa12.83□□□□□ -0.36
MCF2L2-214ENST00000640043 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.36
MCF2L2-214ENST00000640043 CYP27B1O15528 508 aa12.82□□□□□ -0.36
MCF2L2-214ENST00000640043 NEUROD1Q13562 356 aa12.82□□□□□ -0.36
MCF2L2-214ENST00000640043 TESK2Q96S53 571 aa12.82□□□□□ -0.36
MCF2L2-214ENST00000640043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
MCF2L2-214ENST00000640043 PCNTO95613 3336 aa12.82□□□□□ -0.36
MCF2L2-214ENST00000640043 NCAPD2Q15021 1401 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 ZNF831Q5JPB2 1677 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 FYB1O15117 783 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 TRAK2O60296 914 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 MFAP1P55081 439 aaKnown RBP12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 SIK1P57059 783 aa12.81□□□□□ -0.36
MCF2L2-214ENST00000640043 NLGN1Q8N2Q7 840 aa12.8□□□□□ -0.36
MCF2L2-214ENST00000640043 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
MCF2L2-214ENST00000640043 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
MCF2L2-214ENST00000640043 WDR90Q96KV7 1748 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 ARFGEF1Q9Y6D6 1849 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 E9PSI1 815 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 RRS1Q15050 365 aaKnown RBP12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 PIGBQ92521 554 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
MCF2L2-214ENST00000640043 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 PHF14O94880 888 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 FSTL1Q12841 308 aa12.78□□□□□ -0.36
MCF2L2-214ENST00000640043 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms