RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 CHL1O00533 1208 aa11.79□□□□□ -0.52
HNRNPU-218ENST00000639064 SKAP1Q86WV1 359 aa11.79□□□□□ -0.52
HNRNPU-218ENST00000639064 PCDH11XQ9BZA7 1347 aa11.79□□□□□ -0.52
HNRNPU-218ENST00000639064 PCDH11YQ9BZA8 1340 aa11.79□□□□□ -0.52
HNRNPU-218ENST00000639064 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
HNRNPU-218ENST00000639064 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
HNRNPU-218ENST00000639064 THRAP3Q9Y2W1 955 aaKnown RBP11.78□□□□□ -0.52
HNRNPU-218ENST00000639064 TSPYL4Q9UJ04 414 aa11.78□□□□□ -0.52
HNRNPU-218ENST00000639064 WNK3Q9BYP7 1800 aa11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 ELL2O00472 640 aaPredicted RBP11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 PLIN1O60240 522 aa11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 TEFQ10587 303 aa11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 KRT24Q2M2I5 525 aa11.77□□□□□ -0.52
HNRNPU-218ENST00000639064 VIRMAQ69YN4 1812 aaKnown RBP11.77□□□□□ -0.53
HNRNPU-218ENST00000639064 EXOC5O00471 708 aa11.77□□□□□ -0.53
HNRNPU-218ENST00000639064 TSPYL6Q8N831 410 aa11.77□□□□□ -0.53
HNRNPU-218ENST00000639064 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
HNRNPU-218ENST00000639064 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.76□□□□□ -0.53
HNRNPU-218ENST00000639064 BARGINQ6ZT62 677 aa11.76□□□□□ -0.53
HNRNPU-218ENST00000639064 C8orf58Q8NAV2 365 aa11.76□□□□□ -0.53
HNRNPU-218ENST00000639064 ADAMTS7Q9UKP4 1686 aa11.76□□□□□ -0.53
HNRNPU-218ENST00000639064 DDB1Q16531 1140 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 TNS2Q63HR2 1409 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 SCN11AQ9UI33 1791 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 KCNQ3O43525 872 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 BCAR3O75815 825 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 CDCA7Q9BWT1 371 aaPredicted RBP11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
HNRNPU-218ENST00000639064 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 NKX1-1Q15270 411 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 GLI3P10071 1580 aa11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 A0A0G2JS52 829 aa11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 ATRNO75882 1429 aa11.74□□□□□ -0.53
HNRNPU-218ENST00000639064 RARSP54136 660 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 TWISTNBQ3B726 338 aaPredicted RBP11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 VAMP4O75379 141 aa11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 CABP4P57796 275 aa11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 SIPA1L3O60292 1781 aaPredicted RBP11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 SLC39A6Q13433 755 aa11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 MARCH10Q8NA82 808 aaPredicted RBP11.73□□□□□ -0.53
HNRNPU-218ENST00000639064 DDRGK1Q96HY6 314 aa11.72□□□□□ -0.53
HNRNPU-218ENST00000639064 MRC1P22897 1456 aa11.72□□□□□ -0.53
HNRNPU-218ENST00000639064 TOGARAM1Q9Y4F4 1720 aa11.72□□□□□ -0.53
HNRNPU-218ENST00000639064 BABAM1Q9NWV8 329 aa11.72□□□□□ -0.53
HNRNPU-218ENST00000639064 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.53
HNRNPU-218ENST00000639064 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.53
HNRNPU-218ENST00000639064 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
HNRNPU-218ENST00000639064 ERVV-2B6SEH9 535 aa11.71□□□□□ -0.54
HNRNPU-218ENST00000639064 EIF4A1P60842 406 aaKnown RBP11.71□□□□□ -0.54
HNRNPU-218ENST00000639064 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 BRPF3Q9ULD4 1205 aa11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
HNRNPU-218ENST00000639064 THSD7AQ9UPZ6 1657 aa11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 FAM182BQ5T319 152 aa11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 NECTIN2Q92692 538 aa11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 SYTL4Q96C24 671 aaPredicted RBP11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 ACSBG1Q96GR2 724 aa11.69□□□□□ -0.54
HNRNPU-218ENST00000639064 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 NFKBIBQ15653 356 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 PIGBQ92521 554 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 TMOD3Q9NYL9 352 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 PRIM1P49642 420 aaKnown RBP11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 ZNF772Q68DY9 489 aaPredicted RBP11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 KDM2BQ8NHM5 1336 aa11.68□□□□□ -0.54
HNRNPU-218ENST00000639064 GSE1Q14687 1217 aa11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 TNNQ9UQP3 1299 aa11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 DOT1LQ8TEK3 1739 aa11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 ALDH1L2Q3SY69 923 aa11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
HNRNPU-218ENST00000639064 ITGB4P16144 1822 aa11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 GIGYF1O75420 1035 aaPredicted RBP11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 ZNF428Q96B54 188 aa11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 ASAP1Q9ULH1 1129 aa11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 HEG1Q9ULI3 1381 aa11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 CANXP27824 592 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 MRPL50Q8N5N7 158 aaKnown RBP11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 BCL9O00512 1426 aa11.66□□□□□ -0.54
HNRNPU-218ENST00000639064 KCNQ2O43526 872 aa11.65□□□□□ -0.54
HNRNPU-218ENST00000639064 PTCD1O75127 700 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-218ENST00000639064 NOB1Q9ULX3 412 aaKnown RBP11.65□□□□□ -0.54
HNRNPU-218ENST00000639064 EP400Q96L91 3159 aa11.65□□□□□ -0.54
HNRNPU-218ENST00000639064 HDGFL1Q5TGJ6 251 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms