RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 LRP5O75197 1615 aa16.7■□□□□ 0.26
CLN6-225ENST00000638144 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
CLN6-225ENST00000638144 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
CLN6-225ENST00000638144 C4BP0C0L5 1744 aa16.69■□□□□ 0.26
CLN6-225ENST00000638144 LOC102724428A0A0B4J2F2 783 aa16.68■□□□□ 0.26
CLN6-225ENST00000638144 FCHSD2O94868 740 aa16.68■□□□□ 0.26
CLN6-225ENST00000638144 SIK1P57059 783 aa16.68■□□□□ 0.26
CLN6-225ENST00000638144 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
CLN6-225ENST00000638144 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
CLN6-225ENST00000638144 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 ITPK1Q13572 414 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 SLC4A9Q96Q91 983 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
CLN6-225ENST00000638144 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
CLN6-225ENST00000638144 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
CLN6-225ENST00000638144 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
CLN6-225ENST00000638144 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
CLN6-225ENST00000638144 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
CLN6-225ENST00000638144 TFCP2L1Q9NZI6 479 aa16.66■□□□□ 0.26
CLN6-225ENST00000638144 TJP1Q07157 1748 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 PNPLA7Q6ZV29 1317 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
CLN6-225ENST00000638144 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
CLN6-225ENST00000638144 DCTN1Q14203 1278 aa16.64■□□□□ 0.25
CLN6-225ENST00000638144 MCM10Q7L590 875 aa16.64■□□□□ 0.25
CLN6-225ENST00000638144 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
CLN6-225ENST00000638144 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
CLN6-225ENST00000638144 CCDC184Q52MB2 194 aa16.63■□□□□ 0.25
CLN6-225ENST00000638144 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
CLN6-225ENST00000638144 KCPQ6ZWJ8 1503 aa16.63■□□□□ 0.25
CLN6-225ENST00000638144 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 MSH5O43196 834 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 PHF14O94880 888 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 AK7Q96M32 723 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
CLN6-225ENST00000638144 ZNF831Q5JPB2 1677 aa16.62■□□□□ 0.25
CLN6-225ENST00000638144 TEFQ10587 303 aa16.61■□□□□ 0.25
CLN6-225ENST00000638144 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
CLN6-225ENST00000638144 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
CLN6-225ENST00000638144 NEFMP07197 916 aa16.6■□□□□ 0.25
CLN6-225ENST00000638144 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
CLN6-225ENST00000638144 THUMPD2Q9BTF0 503 aaKnown RBP16.6■□□□□ 0.25
CLN6-225ENST00000638144 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
CLN6-225ENST00000638144 GNPATO15228 680 aa16.59■□□□□ 0.25
CLN6-225ENST00000638144 ANP32CO43423 234 aa16.59■□□□□ 0.25
CLN6-225ENST00000638144 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
CLN6-225ENST00000638144 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
CLN6-225ENST00000638144 ADAMTS8Q9UP79 889 aa16.59■□□□□ 0.25
CLN6-225ENST00000638144 RRP7AQ9Y3A4 280 aaKnown RBP16.59■□□□□ 0.25
CLN6-225ENST00000638144 KCNQ3O43525 872 aa16.58■□□□□ 0.24
CLN6-225ENST00000638144 MSL1Q68DK7 614 aa16.58■□□□□ 0.24
CLN6-225ENST00000638144 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
CLN6-225ENST00000638144 CICQ96RK0 1608 aaPredicted RBP16.58■□□□□ 0.24
CLN6-225ENST00000638144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
CLN6-225ENST00000638144 PTGER2P43116 358 aa16.56■□□□□ 0.24
CLN6-225ENST00000638144 NEUROD2Q15784 382 aa16.56■□□□□ 0.24
CLN6-225ENST00000638144 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
CLN6-225ENST00000638144 MTFR1LQ9H019 292 aa16.56■□□□□ 0.24
CLN6-225ENST00000638144 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
CLN6-225ENST00000638144 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
CLN6-225ENST00000638144 CRKLP46109 303 aaKnown RBP16.55■□□□□ 0.24
CLN6-225ENST00000638144 ZNF496Q96IT1 587 aaPredicted RBP16.55■□□□□ 0.24
CLN6-225ENST00000638144 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
CLN6-225ENST00000638144 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
CLN6-225ENST00000638144 PPP1R1BQ9UD71 204 aaPredicted RBP16.55■□□□□ 0.24
CLN6-225ENST00000638144 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
CLN6-225ENST00000638144 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
CLN6-225ENST00000638144 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 CNTNAP4Q9C0A0 1308 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 TMPOP42166 694 aaKnown RBP16.53■□□□□ 0.24
CLN6-225ENST00000638144 RIPK4P57078 832 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 RUNDC1Q96C34 613 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
CLN6-225ENST00000638144 HTATSF1O43719 755 aaKnown RBP16.52■□□□□ 0.24
CLN6-225ENST00000638144 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
CLN6-225ENST00000638144 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
CLN6-225ENST00000638144 SSFA2P28290 1259 aa16.51■□□□□ 0.23
CLN6-225ENST00000638144 RTCBQ9Y3I0 505 aaKnown RBP16.51■□□□□ 0.23
CLN6-225ENST00000638144 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
CLN6-225ENST00000638144 CYP19A1P11511 503 aaPredicted RBP16.5■□□□□ 0.23
CLN6-225ENST00000638144 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
CLN6-225ENST00000638144 INTS5Q6P9B9 1019 aaKnown RBP16.5■□□□□ 0.23
CLN6-225ENST00000638144 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
CLN6-225ENST00000638144 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
CLN6-225ENST00000638144 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
CLN6-225ENST00000638144 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
CLN6-225ENST00000638144 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
CLN6-225ENST00000638144 FLAD1Q8NFF5 587 aa16.49■□□□□ 0.23
CLN6-225ENST00000638144 FMNL2Q96PY5 1086 aa16.49■□□□□ 0.23
CLN6-225ENST00000638144 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
CLN6-225ENST00000638144 HMGB2P26583 209 aaKnown RBP16.48■□□□□ 0.23
CLN6-225ENST00000638144 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
CLN6-225ENST00000638144 ARXQ96QS3 562 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms