RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 RFC4P35249 363 aa9.41□□□□□ -0.9
MECP2-225ENST00000638041 NCBP3Q53F19 620 aaKnown RBP9.41□□□□□ -0.9
MECP2-225ENST00000638041 TRAPPC3LQ5T215 181 aa9.41□□□□□ -0.9
MECP2-225ENST00000638041 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
MECP2-225ENST00000638041 PIGBQ92521 554 aa9.41□□□□□ -0.9
MECP2-225ENST00000638041 ARXQ96QS3 562 aa9.41□□□□□ -0.9
MECP2-225ENST00000638041 CHMP4AQ9BY43 222 aa9.41□□□□□ -0.9
MECP2-225ENST00000638041 ZBTB7AO95365 584 aa9.4□□□□□ -0.9
MECP2-225ENST00000638041 PPP2R1AP30153 589 aa9.4□□□□□ -0.9
MECP2-225ENST00000638041 RC3H1Q5TC82 1133 aaKnown RBP9.4□□□□□ -0.9
MECP2-225ENST00000638041 PROM2Q8N271 834 aa9.4□□□□□ -0.9
MECP2-225ENST00000638041 NLGN1Q8N2Q7 840 aa9.4□□□□□ -0.9
MECP2-225ENST00000638041 A0A087WZG4 1122 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 ZPR1O75312 459 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 KLHL34Q8N239 644 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 NFATC2IPQ8NCF5 419 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 AKT1S1Q96B36 256 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
MECP2-225ENST00000638041 ATF5Q9Y2D1 282 aaPredicted RBP9.39□□□□□ -0.91
MECP2-225ENST00000638041 GNPATO15228 680 aa9.38□□□□□ -0.91
MECP2-225ENST00000638041 MAP3K5Q99683 1374 aa9.37□□□□□ -0.91
MECP2-225ENST00000638041 MYBBP1AQ9BQG0 1328 aaKnown RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 NPHP1O15259 732 aa9.37□□□□□ -0.91
MECP2-225ENST00000638041 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 GRIN3BO60391 1043 aa9.37□□□□□ -0.91
MECP2-225ENST00000638041 PTCD1O75127 700 aaKnown RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 CALD1Q05682 793 aaKnown RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 DDX10Q13206 875 aaKnown RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 FMNL2Q96PY5 1086 aa9.37□□□□□ -0.91
MECP2-225ENST00000638041 ANO8Q9HCE9 1232 aaPredicted RBP9.37□□□□□ -0.91
MECP2-225ENST00000638041 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
MECP2-225ENST00000638041 LY75O60449 1722 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 QSER1Q2KHR3 1735 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.36□□□□□ -0.91
MECP2-225ENST00000638041 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 ANP32CO43423 234 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 GPR162Q16538 588 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 PTF1AQ7RTS3 328 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 ATG3Q9NT62 314 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 LRRC4BQ9NT99 713 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 CCDC87Q9NVE4 849 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
MECP2-225ENST00000638041 ITGB4P16144 1822 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 CNTNAP4Q9C0A0 1308 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 RPS6KA4O75676 772 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 PHF14O94880 888 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 MTHFSDQ2M296 383 aaKnown RBP9.35□□□□□ -0.91
MECP2-225ENST00000638041 SHANK3Q9BYB0 1731 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 CD2APQ9Y5K6 639 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 C5P01031 1676 aa9.35□□□□□ -0.91
MECP2-225ENST00000638041 PNPLA7Q6ZV29 1317 aa9.34□□□□□ -0.91
MECP2-225ENST00000638041 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
MECP2-225ENST00000638041 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
MECP2-225ENST00000638041 ZNF652Q9Y2D9 606 aa9.34□□□□□ -0.91
MECP2-225ENST00000638041 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
MECP2-225ENST00000638041 PELP1Q8IZL8 1130 aaKnown RBP9.33□□□□□ -0.92
MECP2-225ENST00000638041 FHDC1Q9C0D6 1143 aaPredicted RBP9.33□□□□□ -0.92
MECP2-225ENST00000638041 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
MECP2-225ENST00000638041 C4BP0C0L5 1744 aa9.33□□□□□ -0.92
MECP2-225ENST00000638041 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
MECP2-225ENST00000638041 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
MECP2-225ENST00000638041 ZNF790Q6PG37 636 aa9.32□□□□□ -0.92
MECP2-225ENST00000638041 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
MECP2-225ENST00000638041 SYT17Q9BSW7 474 aa9.32□□□□□ -0.92
MECP2-225ENST00000638041 BABAM1Q9NWV8 329 aa9.32□□□□□ -0.92
MECP2-225ENST00000638041 PAPPAQ13219 1627 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 SNRPA1P09661 255 aaKnown RBP9.31□□□□□ -0.92
MECP2-225ENST00000638041 PTGER2P43116 358 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
MECP2-225ENST00000638041 KCNQ4P56696 695 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 TGFB2P61812 414 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 LINC00116Q8NCU8 138 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 SCN11AQ9UI33 1791 aa9.31□□□□□ -0.92
MECP2-225ENST00000638041 YY1P25490 414 aa9.3□□□□□ -0.92
MECP2-225ENST00000638041 RUNDC1Q96C34 613 aa9.3□□□□□ -0.92
MECP2-225ENST00000638041 TMX4Q9H1E5 349 aaPredicted RBP9.3□□□□□ -0.92
MECP2-225ENST00000638041 LGR6Q9HBX8 967 aa9.3□□□□□ -0.92
MECP2-225ENST00000638041 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
MECP2-225ENST00000638041 IL6STP40189 918 aaPredicted RBP9.29□□□□□ -0.92
MECP2-225ENST00000638041 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
MECP2-225ENST00000638041 TAF1LQ8IZX4 1826 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 RGL2O15211 777 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
MECP2-225ENST00000638041 RIPK4P57078 832 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 ITPK1Q13572 414 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 KIF6Q6ZMV9 814 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 ARHGEF1Q92888 912 aaKnown RBP9.28□□□□□ -0.92
MECP2-225ENST00000638041 TOGARAM1Q9Y4F4 1720 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
MECP2-225ENST00000638041 MRC1P22897 1456 aa9.28□□□□□ -0.92
MECP2-225ENST00000638041 MMP10P09238 476 aa9.27□□□□□ -0.93
MECP2-225ENST00000638041 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
MECP2-225ENST00000638041 ST5P78524 1137 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms