RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-233ENST00000638031 MTHFSDQ2M296 383 aaKnown RBP25.42■■□□□ 1.66
CHRNA7-233ENST00000638031 C1orf141Q5JVX7 400 aa25.42■■□□□ 1.66
CHRNA7-233ENST00000638031 NFATC2IPQ8NCF5 419 aa25.42■■□□□ 1.66
CHRNA7-233ENST00000638031 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
CHRNA7-233ENST00000638031 CABP4P57796 275 aa25.41■■□□□ 1.66
CHRNA7-233ENST00000638031 MAP3K5Q99683 1374 aa25.41■■□□□ 1.66
CHRNA7-233ENST00000638031 UTRNP46939 3433 aa25.4■■□□□ 1.66
CHRNA7-233ENST00000638031 ATP6V1AP38606 617 aa25.4■■□□□ 1.66
CHRNA7-233ENST00000638031 AKAP4Q5JQC9 854 aa25.4■■□□□ 1.66
CHRNA7-233ENST00000638031 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
CHRNA7-233ENST00000638031 YY1P25490 414 aa25.39■■□□□ 1.66
CHRNA7-233ENST00000638031 POLD1P28340 1107 aa25.39■■□□□ 1.66
CHRNA7-233ENST00000638031 MSH5O43196 834 aa25.38■■□□□ 1.65
CHRNA7-233ENST00000638031 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
CHRNA7-233ENST00000638031 HMGB2P26583 209 aaKnown RBP25.37■■□□□ 1.65
CHRNA7-233ENST00000638031 MSL1Q68DK7 614 aa25.36■■□□□ 1.65
CHRNA7-233ENST00000638031 AK7Q96M32 723 aa25.36■■□□□ 1.65
CHRNA7-233ENST00000638031 RBM42Q9BTD8 480 aaKnown RBP25.36■■□□□ 1.65
CHRNA7-233ENST00000638031 RNMTO43148 476 aaKnown RBP25.35■■□□□ 1.65
CHRNA7-233ENST00000638031 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.34■■□□□ 1.65
CHRNA7-233ENST00000638031 PHF14O94880 888 aa25.34■■□□□ 1.65
CHRNA7-233ENST00000638031 FLAD1Q8NFF5 587 aa25.34■■□□□ 1.65
CHRNA7-233ENST00000638031 UBR3Q6ZT12 1888 aa25.33■■□□□ 1.65
CHRNA7-233ENST00000638031 SLC52A2Q9HAB3 445 aa25.33■■□□□ 1.65
CHRNA7-233ENST00000638031 SCN11AQ9UI33 1791 aa25.32■■□□□ 1.64
CHRNA7-233ENST00000638031 PTCD1O75127 700 aaKnown RBP25.32■■□□□ 1.64
CHRNA7-233ENST00000638031 PHACTR3Q96KR7 559 aa25.32■■□□□ 1.64
CHRNA7-233ENST00000638031 KLHL34Q8N239 644 aa25.31■■□□□ 1.64
CHRNA7-233ENST00000638031 GNPATO15228 680 aa25.3■■□□□ 1.64
CHRNA7-233ENST00000638031 SSFA2P28290 1259 aa25.3■■□□□ 1.64
CHRNA7-233ENST00000638031 RSPH6AQ9H0K4 717 aa25.3■■□□□ 1.64
CHRNA7-233ENST00000638031 GOLGB1Q14789 3259 aaKnown RBP25.29■■□□□ 1.64
CHRNA7-233ENST00000638031 SLC39A6Q13433 755 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 IL17REQ8NFR9 667 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 NLGN2Q8NFZ4 835 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 ZNF831Q5JPB2 1677 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 ADAMTS7Q9UKP4 1686 aa25.28■■□□□ 1.64
CHRNA7-233ENST00000638031 RC3H1Q5TC82 1133 aaKnown RBP25.27■■□□□ 1.64
CHRNA7-233ENST00000638031 MRC1P22897 1456 aa25.27■■□□□ 1.64
CHRNA7-233ENST00000638031 PRKAR2BP31323 418 aa25.26■■□□□ 1.63
CHRNA7-233ENST00000638031 COL5A3P25940 1745 aaPredicted RBP25.24■■□□□ 1.63
CHRNA7-233ENST00000638031 CNTNAP4Q9C0A0 1308 aa25.24■■□□□ 1.63
CHRNA7-233ENST00000638031 RPS6KA4O75676 772 aa25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 U2AF1L5P0DN76 240 aaPredicted RBP25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 U2AF1Q01081 240 aaKnown RBP eCLIP25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 GPR162Q16538 588 aa25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 ARHGEF1Q92888 912 aaKnown RBP25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 MYH14Q7Z406 1995 aaKnown RBP25.23■■□□□ 1.63
CHRNA7-233ENST00000638031 GNAT3A8MTJ3 354 aa25.22■■□□□ 1.63
CHRNA7-233ENST00000638031 DDX10Q13206 875 aaKnown RBP25.22■■□□□ 1.63
CHRNA7-233ENST00000638031 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
CHRNA7-233ENST00000638031 NUDCQ9Y266 331 aa25.22■■□□□ 1.63
CHRNA7-233ENST00000638031 RTCBQ9Y3I0 505 aaKnown RBP25.22■■□□□ 1.63
CHRNA7-233ENST00000638031 CRKLP46109 303 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-233ENST00000638031 TRAPPC3LQ5T215 181 aa25.21■■□□□ 1.63
CHRNA7-233ENST00000638031 INTS5Q6P9B9 1019 aaKnown RBP25.21■■□□□ 1.63
CHRNA7-233ENST00000638031 DNAJC10Q8IXB1 793 aa25.21■■□□□ 1.63
CHRNA7-233ENST00000638031 CHD4Q14839 1912 aa25.21■■□□□ 1.63
CHRNA7-233ENST00000638031 TJP1Q07157 1748 aa25.2■■□□□ 1.63
CHRNA7-233ENST00000638031 VIRMAQ69YN4 1812 aaKnown RBP25.2■■□□□ 1.62
CHRNA7-233ENST00000638031 KCPQ6ZWJ8 1503 aa25.19■■□□□ 1.62
CHRNA7-233ENST00000638031 FCHSD2O94868 740 aa25.19■■□□□ 1.62
CHRNA7-233ENST00000638031 CD2APQ9Y5K6 639 aa25.19■■□□□ 1.62
CHRNA7-233ENST00000638031 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
CHRNA7-233ENST00000638031 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
CHRNA7-233ENST00000638031 CICQ96RK0 1608 aaPredicted RBP25.16■■□□□ 1.62
CHRNA7-233ENST00000638031 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
CHRNA7-233ENST00000638031 GYS1P13807 737 aa25.15■■□□□ 1.62
CHRNA7-233ENST00000638031 YBX3P16989 372 aaKnown RBP eCLIP25.15■■□□□ 1.62
CHRNA7-233ENST00000638031 ADRA2BP18089 450 aa25.15■■□□□ 1.62
CHRNA7-233ENST00000638031 ZNF784Q8NCA9 323 aaPredicted RBP25.14■■□□□ 1.62
CHRNA7-233ENST00000638031 KCNQ3O43525 872 aa25.13■■□□□ 1.61
CHRNA7-233ENST00000638031 ZNF496Q96IT1 587 aaPredicted RBP25.13■■□□□ 1.61
CHRNA7-233ENST00000638031 SRP68Q9UHB9 627 aaKnown RBP25.13■■□□□ 1.61
CHRNA7-233ENST00000638031 MMP10P09238 476 aa25.12■■□□□ 1.61
CHRNA7-233ENST00000638031 RFC4P35249 363 aa25.12■■□□□ 1.61
CHRNA7-233ENST00000638031 TEFQ10587 303 aa25.12■■□□□ 1.61
CHRNA7-233ENST00000638031 ZNF790Q6PG37 636 aa25.12■■□□□ 1.61
CHRNA7-233ENST00000638031 DCTN1Q14203 1278 aa25.11■■□□□ 1.61
CHRNA7-233ENST00000638031 MCM10Q7L590 875 aa25.11■■□□□ 1.61
CHRNA7-233ENST00000638031 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
CHRNA7-233ENST00000638031 PLEKHF1Q96S99 279 aa25.11■■□□□ 1.61
CHRNA7-233ENST00000638031 CCDC87Q9NVE4 849 aa25.11■■□□□ 1.61
CHRNA7-233ENST00000638031 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
CHRNA7-233ENST00000638031 NLGN1Q8N2Q7 840 aa25.1■■□□□ 1.61
CHRNA7-233ENST00000638031 UBR2Q8IWV8 1755 aa25.1■■□□□ 1.61
CHRNA7-233ENST00000638031 RALBP1Q15311 655 aa25.09■■□□□ 1.61
CHRNA7-233ENST00000638031 ZBTB1Q9Y2K1 713 aa25.09■■□□□ 1.61
CHRNA7-233ENST00000638031 C4AP0C0L4 1744 aa25.08■■□□□ 1.61
CHRNA7-233ENST00000638031 SOS1Q07889 1333 aaPredicted RBP25.08■■□□□ 1.6
CHRNA7-233ENST00000638031 USP42Q9H9J4 1324 aaKnown RBP25.08■■□□□ 1.6
CHRNA7-233ENST00000638031 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
CHRNA7-233ENST00000638031 FKBP8Q14318 412 aa25.07■■□□□ 1.6
CHRNA7-233ENST00000638031 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
CHRNA7-233ENST00000638031 HEG1Q9ULI3 1381 aa25.05■■□□□ 1.6
CHRNA7-233ENST00000638031 BTBD11A6QL63 1104 aa25.05■■□□□ 1.6
CHRNA7-233ENST00000638031 HTATSF1O43719 755 aaKnown RBP25.03■■□□□ 1.6
CHRNA7-233ENST00000638031 DDR1Q08345 913 aa25.03■■□□□ 1.6
CHRNA7-233ENST00000638031 PRAMEF22A3QJZ6 481 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms