RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 PTCD1O75127 700 aaKnown RBP19.02■□□□□ 0.63
CACNA1A-258ENST00000638029 TAF12Q16514 161 aa19.02■□□□□ 0.63
CACNA1A-258ENST00000638029 CAMK4Q16566 473 aa19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 PROCA1Q8NCQ7 364 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 PRPF4BQ13523 1007 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 CUL5Q93034 780 aa19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 JMYQ8N9B5 988 aa19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 PAIP2Q9BPZ3 127 aaKnown RBP19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 PSMC4P43686 418 aa19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 BIRC2Q13490 618 aa19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 ZNF397Q8NF99 534 aaPredicted RBP19.01■□□□□ 0.63
CACNA1A-258ENST00000638029 BICD1Q96G01 975 aa19■□□□□ 0.63
CACNA1A-258ENST00000638029 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
CACNA1A-258ENST00000638029 MCM2P49736 904 aa19■□□□□ 0.63
CACNA1A-258ENST00000638029 PRDM11Q9NQV5 511 aa19■□□□□ 0.63
CACNA1A-258ENST00000638029 DACH1Q9UI36 760 aa19■□□□□ 0.63
CACNA1A-258ENST00000638029 FILIP1Q7Z7B0 1213 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 TXNDC2Q86VQ3 553 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 C6orf229H3BNL8 230 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 CFAP58Q5T655 872 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 FAM212AQ96EL1 285 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 IQCEQ6IPM2 695 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 RAB3IL1Q8TBN0 382 aa18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 ZC3H6P61129 1189 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 GIGYF2Q6Y7W6 1299 aaKnown RBP18.98■□□□□ 0.63
CACNA1A-258ENST00000638029 ATP2C2O75185 946 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 ANKRD1Q15327 319 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 SYNCQ9H7C4 482 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 CGNQ9P2M7 1197 aaKnown RBP18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 BTBD11A6QL63 1104 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 CACNA2D4Q7Z3S7 1137 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 SYCP3Q8IZU3 236 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 AAMPQ13685 434 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 TXLNBQ8N3L3 684 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 CFAP57Q96MR6 1250 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 ERLIN1O75477 346 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
CACNA1A-258ENST00000638029 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 RRP9O43818 475 aaKnown RBP18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 NLRP5P59047 1200 aa18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 TTC36A6NLP5 189 aa18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 PPP1R14CQ8TAE6 165 aa18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 MYOM3Q5VTT5 1437 aa18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 POLR3GO15318 223 aaPredicted RBP18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 METTL24Q5JXM2 366 aa18.96■□□□□ 0.63
CACNA1A-258ENST00000638029 CAVIN4Q5BKX8 364 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 SPG7Q9UQ90 795 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 CASQ1P31415 396 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 AACSQ86V21 672 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 LUZP1Q86V48 1076 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 TSNARE1Q96NA8 513 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 CYP46A1Q9Y6A2 500 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 FYCO1Q9BQS8 1478 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 CWC27Q6UX04 472 aaKnown RBP18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
CACNA1A-258ENST00000638029 HDGFL1Q5TGJ6 251 aa18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 AIDAQ96BJ3 306 aa18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 ANKRD18BA2A2Z9 1011 aa18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 MBD3O95983 291 aa18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 CRACR2AQ9BSW2 395 aa18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 RBM26Q5T8P6 1007 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 RANBP6O60518 1105 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 NOB1Q9ULX3 412 aaKnown RBP18.94■□□□□ 0.62
CACNA1A-258ENST00000638029 CCDC175P0C221 793 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 CFAP100Q494V2 611 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 CCDC192P0DO97 292 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 SPA17Q15506 151 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 FAM107BQ9H098 131 aa18.93■□□□□ 0.62
CACNA1A-258ENST00000638029 TWISTNBQ3B726 338 aaPredicted RBP18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 GUCY1B3Q02153 619 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 MXRA7P84157 204 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 SPECC1Q5M775 1068 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 ODF2LQ9ULJ1 636 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 SHTN1A0MZ66 631 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 CPLX3Q8WVH0 158 aa18.92■□□□□ 0.62
CACNA1A-258ENST00000638029 CCDC144CPQ8IYA2 1237 aa18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 PDCL2Q8N4E4 241 aa18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 LARP1BQ659C4 914 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 ZNF408Q9H9D4 720 aa18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 HLTFQ14527 1009 aaKnown RBP eCLIP18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 TSG101Q99816 390 aa18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 F8W031 263 aaPredicted RBP18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 PRC1O43663 620 aa18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 UTP14AQ9BVJ6 771 aaKnown RBP18.91■□□□□ 0.62
CACNA1A-258ENST00000638029 GCOM1H8Y6P7 765 aaPredicted RBP18.9■□□□□ 0.62
CACNA1A-258ENST00000638029 MYZAPP0CAP1 466 aa18.9■□□□□ 0.62
CACNA1A-258ENST00000638029 KCNA4P22459 653 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms