RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-225ENST00000637911 KRTAP5-7Q6L8G8 165 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 DPY19L2P1Q6NXN4 242 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 SLCO4C1Q6ZQN7 724 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 CHSY3Q70JA7 882 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 DNAJC10Q8IXB1 793 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 TRIM22Q8IYM9 498 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZBTB8BQ8NAP8 495 aaPredicted RBP0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 SSBP4Q9BWG4 385 aaPredicted RBP0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 MFRPQ9BY79 579 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP1-5Q9BYS1 174 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 CUEDC1Q9NWM3 386 aaPredicted RBP0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 PIM2Q9P1W9 311 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 GGA1Q9UJY5 639 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 PCDHGA10Q9Y5H3 936 aa0.24□□□□□ -2.37
SYNGAP1-225ENST00000637911 CNTNAP2Q9UHC6 1331 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 SPTLC1O15269 473 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 IGLV1-40P01703 118 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 TMEM253P0C7T8 217 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 C1QTNF9P0C862 333 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 HOXB6P17509 224 aaKnown RBP0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 TACR2P21452 398 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 FECHP22830 423 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 NANOS3P60323 173 aaKnown RBP0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 TGFB2P61812 414 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 KCNA10Q16322 511 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 ZNF827Q17R98 1081 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 PRPF38BQ5VTL8 546 aaKnown RBP0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 HHIPL2Q6UWX4 724 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 CCDC24Q8N4L8 307 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 MEIOBQ8N635 442 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 AGBL5Q8NDL9 886 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 LENG1Q96BZ8 264 aaPredicted RBP0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 ITPKCQ96DU7 683 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 EMILIN3Q9NT22 766 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 TESQ9UGI8 421 aaKnown RBP0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 PHF24Q9UPV7 400 aa0.23□□□□□ -2.37
SYNGAP1-225ENST00000637911 TCAF2A6NFQ2 919 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 SUSD5O60279 629 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 FZD7O75084 574 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 SASH1O94885 1247 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 BMP4P12644 408 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 SELPP16109 830 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 ACVRL1P37023 503 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP10-5P60370 271 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 DBN1Q16643 649 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 TRAPPC3LQ5T215 181 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 RNF135Q8IUD6 432 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 WASF1Q92558 559 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 KLF16Q9BXK1 252 aaPredicted RBP0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 KRTAP2-2Q9BYT5 123 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 IRF2BPLQ9H1B7 796 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 PCED1AQ9H1Q7 454 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 TLL2Q9Y6L7 1015 aa0.22□□□□□ -2.37
SYNGAP1-225ENST00000637911 NEURL1BA8MQ27 555 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 PHF14O94880 888 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 FMNL1O95466 1100 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 CBSLP0DN79 551 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 CBSP35520 551 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 IREB2P48200 963 aaKnown RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 KRTAP10-8P60410 259 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 RAC1P63000 192 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 PURAQ00577 322 aaKnown RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 FAM69CQ0P6D2 419 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 SEMA3FQ13275 785 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 DSG2Q14126 1118 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 ARID5BQ14865 1188 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 LCE1FQ5T754 118 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 NUDT18Q6ZVK8 323 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 ATG4DQ86TL0 474 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 VSIG10LQ86VR7 867 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 FAM160A2Q8N612 972 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 FLCNQ8NFG4 579 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 WFDC12Q8WWY7 111 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 RBM33Q96EV2 1170 aaKnown RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 CDCA7LQ96GN5 454 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 Q96M66 194 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 KCNC2Q96PR1 638 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 BDH2Q9BUT1 245 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 CFHR5Q9BXR6 569 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 PDGFDQ9GZP0 370 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 VPS33BQ9H267 617 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 POLMQ9NP87 494 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 PRDM9Q9NQV7 894 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 STOML1Q9UBI4 398 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 CCDC39Q9UFE4 941 aa0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.21□□□□□ -2.38
SYNGAP1-225ENST00000637911 WDR33Q9C0J8 1336 aaKnown RBP0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 K7ESM1 405 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 SPINT1O43278 529 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 GIGYF1O75420 1035 aaPredicted RBP0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 EGFRP00533 1210 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 ALAS2P22557 587 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 PRSS12P56730 875 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 GRM7Q14831 915 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 PLCL1Q15111 1095 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 RTN1Q16799 776 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 PUS10Q3MIT2 529 aaKnown RBP0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 KRTAP13-3Q3SY46 172 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 ZKSCAN2Q63HK3 967 aa0.2□□□□□ -2.38
SYNGAP1-225ENST00000637911 SHISA2Q6UWI4 295 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms