RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 IDI1Q13907 227 aa17.4■□□□□ 0.38
CACNA1A-244ENST00000637625 NEXMIFQ5QGS0 1516 aa17.4■□□□□ 0.38
CACNA1A-244ENST00000637625 SLF2Q8IX21 1173 aa17.39■□□□□ 0.38
CACNA1A-244ENST00000637625 TMEM131LA2VDJ0 1609 aa17.39■□□□□ 0.37
CACNA1A-244ENST00000637625 PATL2C9JE40 543 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-244ENST00000637625 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
CACNA1A-244ENST00000637625 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
CACNA1A-244ENST00000637625 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-244ENST00000637625 CFHP08603 1231 aa17.37■□□□□ 0.37
CACNA1A-244ENST00000637625 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
CACNA1A-244ENST00000637625 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
CACNA1A-244ENST00000637625 VRTNQ9H8Y1 702 aa17.37■□□□□ 0.37
CACNA1A-244ENST00000637625 RABGEF1Q9UJ41 708 aa17.36■□□□□ 0.37
CACNA1A-244ENST00000637625 SCAF11Q99590 1463 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-244ENST00000637625 DISP3Q9P2K9 1392 aa17.35■□□□□ 0.37
CACNA1A-244ENST00000637625 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
CACNA1A-244ENST00000637625 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
CACNA1A-244ENST00000637625 SOX11P35716 441 aa17.34■□□□□ 0.37
CACNA1A-244ENST00000637625 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-244ENST00000637625 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
CACNA1A-244ENST00000637625 SEMA3FQ13275 785 aa17.33■□□□□ 0.37
CACNA1A-244ENST00000637625 PIK3CDO00329 1044 aa17.33■□□□□ 0.36
CACNA1A-244ENST00000637625 TESK2Q96S53 571 aa17.33■□□□□ 0.36
CACNA1A-244ENST00000637625 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
CACNA1A-244ENST00000637625 ATP6V1AP38606 617 aa17.32■□□□□ 0.36
CACNA1A-244ENST00000637625 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
CACNA1A-244ENST00000637625 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
CACNA1A-244ENST00000637625 ATP9BO43861 1147 aa17.3■□□□□ 0.36
CACNA1A-244ENST00000637625 SND1Q7KZF4 910 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-244ENST00000637625 ZMIZ1Q9ULJ6 1067 aa17.3■□□□□ 0.36
CACNA1A-244ENST00000637625 SETBP1Q9Y6X0 1596 aa17.3■□□□□ 0.36
CACNA1A-244ENST00000637625 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-244ENST00000637625 DMRTA1Q5VZB9 504 aa17.29■□□□□ 0.36
CACNA1A-244ENST00000637625 EIF3AQ14152 1382 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-244ENST00000637625 FAM98CQ17RN3 349 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-244ENST00000637625 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
CACNA1A-244ENST00000637625 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
CACNA1A-244ENST00000637625 FBXO45P0C2W1 286 aa17.28■□□□□ 0.36
CACNA1A-244ENST00000637625 PUS10Q3MIT2 529 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-244ENST00000637625 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
CACNA1A-244ENST00000637625 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-244ENST00000637625 TMF1P82094 1093 aa17.27■□□□□ 0.36
CACNA1A-244ENST00000637625 CCDC27Q2M243 656 aa17.27■□□□□ 0.35
CACNA1A-244ENST00000637625 RETREG3Q86VR2 466 aa17.27■□□□□ 0.35
CACNA1A-244ENST00000637625 A2ML1A8K2U0 1454 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 CCER2I3L3R5 266 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 STK32AQ8WU08 396 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 SLC27A5Q9Y2P5 690 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 AXIN2Q9Y2T1 843 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 C3P01024 1663 aa17.26■□□□□ 0.35
CACNA1A-244ENST00000637625 MORN1Q5T089 497 aa17.25■□□□□ 0.35
CACNA1A-244ENST00000637625 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-244ENST00000637625 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
CACNA1A-244ENST00000637625 TNRQ92752 1358 aa17.25■□□□□ 0.35
CACNA1A-244ENST00000637625 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 ASXL1Q8IXJ9 1541 aa17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 SCUBE2Q9NQ36 999 aa17.24■□□□□ 0.35
CACNA1A-244ENST00000637625 TMEM164Q5U3C3 297 aa17.23■□□□□ 0.35
CACNA1A-244ENST00000637625 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-244ENST00000637625 KDM5AP29375 1690 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 RNF40O75150 1001 aa17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 NR1H3Q13133 447 aa17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 DESI1Q6ICB0 168 aa17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 PHLDB3Q6NSJ2 640 aa17.22■□□□□ 0.35
CACNA1A-244ENST00000637625 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
CACNA1A-244ENST00000637625 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
CACNA1A-244ENST00000637625 MYOM1P52179 1685 aa17.21■□□□□ 0.35
CACNA1A-244ENST00000637625 UBR1Q8IWV7 1749 aa17.21■□□□□ 0.35
CACNA1A-244ENST00000637625 LYPD8Q6UX82 237 aa17.2■□□□□ 0.34
CACNA1A-244ENST00000637625 RNF19BQ6ZMZ0 732 aa17.2■□□□□ 0.34
CACNA1A-244ENST00000637625 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-244ENST00000637625 CCDC184Q52MB2 194 aa17.2■□□□□ 0.34
CACNA1A-244ENST00000637625 GNEQ9Y223 722 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-244ENST00000637625 POTEHQ6S545 545 aa17.19■□□□□ 0.34
CACNA1A-244ENST00000637625 RIMS1Q86UR5 1692 aaKnown RBP17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 ARHGAP33O14559 1287 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 CENPJQ9HC77 1338 aaPredicted RBP17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 ALKQ9UM73 1620 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 BLOC1S3Q6QNY0 202 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 FAM174AQ8TBP5 190 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 VPS9D1Q9Y2B5 631 aa17.18■□□□□ 0.34
CACNA1A-244ENST00000637625 STK26Q9P289 416 aa17.17■□□□□ 0.34
CACNA1A-244ENST00000637625 ELOAQ14241 798 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-244ENST00000637625 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 USP17L2Q6R6M4 530 aa17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 PANK3Q9H999 370 aa17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 SETD1AO15047 1707 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-244ENST00000637625 IGSF3O75054 1194 aa17.14■□□□□ 0.33
CACNA1A-244ENST00000637625 DEPDC4Q8N2C3 294 aa17.14■□□□□ 0.33
CACNA1A-244ENST00000637625 PNMA1Q8ND90 353 aa17.14■□□□□ 0.33
CACNA1A-244ENST00000637625 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
CACNA1A-244ENST00000637625 PTPRMP28827 1452 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms