RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 ITPK1Q13572 414 aa17.36■□□□□ 0.37
CTSD-210ENST00000637381 AK7Q96M32 723 aa17.36■□□□□ 0.37
CTSD-210ENST00000637381 SULT6B1Q6IMI4 303 aa17.35■□□□□ 0.37
CTSD-210ENST00000637381 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
CTSD-210ENST00000637381 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
CTSD-210ENST00000637381 COL5A3P25940 1745 aaPredicted RBP17.34■□□□□ 0.37
CTSD-210ENST00000637381 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
CTSD-210ENST00000637381 MTHFSP49914 203 aa17.34■□□□□ 0.37
CTSD-210ENST00000637381 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
CTSD-210ENST00000637381 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
CTSD-210ENST00000637381 SLC4A9Q96Q91 983 aa17.34■□□□□ 0.37
CTSD-210ENST00000637381 NPC1L1Q9UHC9 1359 aa17.34■□□□□ 0.37
CTSD-210ENST00000637381 MSL1Q68DK7 614 aa17.33■□□□□ 0.36
CTSD-210ENST00000637381 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
CTSD-210ENST00000637381 GPR162Q16538 588 aa17.32■□□□□ 0.36
CTSD-210ENST00000637381 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
CTSD-210ENST00000637381 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
CTSD-210ENST00000637381 CICQ96RK0 1608 aaPredicted RBP17.31■□□□□ 0.36
CTSD-210ENST00000637381 CABP4P57796 275 aa17.3■□□□□ 0.36
CTSD-210ENST00000637381 C1orf141Q5JVX7 400 aa17.3■□□□□ 0.36
CTSD-210ENST00000637381 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
CTSD-210ENST00000637381 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
CTSD-210ENST00000637381 GNPATO15228 680 aa17.29■□□□□ 0.36
CTSD-210ENST00000637381 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
CTSD-210ENST00000637381 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
CTSD-210ENST00000637381 MYH14Q7Z406 1995 aaKnown RBP17.29■□□□□ 0.36
CTSD-210ENST00000637381 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
CTSD-210ENST00000637381 PHF14O94880 888 aa17.28■□□□□ 0.36
CTSD-210ENST00000637381 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
CTSD-210ENST00000637381 CNTNAP4Q9C0A0 1308 aa17.27■□□□□ 0.36
CTSD-210ENST00000637381 YBX3P16989 372 aaKnown RBP eCLIP17.27■□□□□ 0.362e-6■■□□□ 13
CTSD-210ENST00000637381 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
CTSD-210ENST00000637381 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
CTSD-210ENST00000637381 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
CTSD-210ENST00000637381 GRIN3BO60391 1043 aa17.26■□□□□ 0.35
CTSD-210ENST00000637381 DIAPH1O60610 1272 aaKnown RBP17.26■□□□□ 0.35
CTSD-210ENST00000637381 ADRA2BP18089 450 aa17.26■□□□□ 0.35
CTSD-210ENST00000637381 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
CTSD-210ENST00000637381 RTCBQ9Y3I0 505 aaKnown RBP17.26■□□□□ 0.35
CTSD-210ENST00000637381 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
CTSD-210ENST00000637381 TJP1Q07157 1748 aa17.25■□□□□ 0.35
CTSD-210ENST00000637381 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
CTSD-210ENST00000637381 MRC1P22897 1456 aa17.24■□□□□ 0.35
CTSD-210ENST00000637381 ARHGEF1Q92888 912 aaKnown RBP17.24■□□□□ 0.35
CTSD-210ENST00000637381 LGR6Q9HBX8 967 aa17.24■□□□□ 0.35
CTSD-210ENST00000637381 HMOX1P09601 288 aa17.23■□□□□ 0.35
CTSD-210ENST00000637381 NLGN1Q8N2Q7 840 aa17.23■□□□□ 0.35
CTSD-210ENST00000637381 SLC52A2Q9HAB3 445 aa17.23■□□□□ 0.35
CTSD-210ENST00000637381 C4AP0C0L4 1744 aa17.23■□□□□ 0.35
CTSD-210ENST00000637381 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
CTSD-210ENST00000637381 PTCD1O75127 700 aaKnown RBP17.22■□□□□ 0.35
CTSD-210ENST00000637381 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
CTSD-210ENST00000637381 PELP1Q8IZL8 1130 aaKnown RBP17.22■□□□□ 0.35
CTSD-210ENST00000637381 KIAA1551Q9HCM1 1747 aa17.21■□□□□ 0.35
CTSD-210ENST00000637381 MMP10P09238 476 aa17.2■□□□□ 0.34
CTSD-210ENST00000637381 GYS1P13807 737 aa17.2■□□□□ 0.34
CTSD-210ENST00000637381 CRKLP46109 303 aaKnown RBP17.2■□□□□ 0.34
CTSD-210ENST00000637381 UBR2Q8IWV8 1755 aa17.19■□□□□ 0.34
CTSD-210ENST00000637381 KCPQ6ZWJ8 1503 aa17.18■□□□□ 0.34
CTSD-210ENST00000637381 RFC4P35249 363 aa17.18■□□□□ 0.34
CTSD-210ENST00000637381 INTS5Q6P9B9 1019 aaKnown RBP17.18■□□□□ 0.34
CTSD-210ENST00000637381 SIPA1L3O60292 1781 aaPredicted RBP17.17■□□□□ 0.34
CTSD-210ENST00000637381 TGFB2P61812 414 aa17.16■□□□□ 0.34
CTSD-210ENST00000637381 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
CTSD-210ENST00000637381 C10orf71Q711Q0 1435 aa17.15■□□□□ 0.34
CTSD-210ENST00000637381 CYP19A1P11511 503 aaPredicted RBP17.15■□□□□ 0.34
CTSD-210ENST00000637381 DNAJC10Q8IXB1 793 aa17.15■□□□□ 0.34
CTSD-210ENST00000637381 USP42Q9H9J4 1324 aaKnown RBP17.15■□□□□ 0.34
CTSD-210ENST00000637381 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
CTSD-210ENST00000637381 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
CTSD-210ENST00000637381 PXDNLA1KZ92 1463 aa17.14■□□□□ 0.33
CTSD-210ENST00000637381 SLC39A6Q13433 755 aa17.14■□□□□ 0.33
CTSD-210ENST00000637381 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
CTSD-210ENST00000637381 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
CTSD-210ENST00000637381 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
CTSD-210ENST00000637381 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
CTSD-210ENST00000637381 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
CTSD-210ENST00000637381 GNAT3A8MTJ3 354 aa17.12■□□□□ 0.33
CTSD-210ENST00000637381 TM4SF1P30408 202 aa17.12■□□□□ 0.33
CTSD-210ENST00000637381 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
CTSD-210ENST00000637381 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
CTSD-210ENST00000637381 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
CTSD-210ENST00000637381 ADCY9O60503 1353 aa17.12■□□□□ 0.33
CTSD-210ENST00000637381 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 C1QTNF8P60827 252 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
CTSD-210ENST00000637381 FKBP8Q14318 412 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 CEMIPQ8WUJ3 1361 aa17.11■□□□□ 0.33
CTSD-210ENST00000637381 A0A0G2JLW4 131 aa17.09■□□□□ 0.33
CTSD-210ENST00000637381 KCNA3P22001 575 aa17.09■□□□□ 0.33
CTSD-210ENST00000637381 DDR1Q08345 913 aa17.09■□□□□ 0.33
CTSD-210ENST00000637381 NARFQ9UHQ1 456 aa17.09■□□□□ 0.33
CTSD-210ENST00000637381 ARFGEF1Q9Y6D6 1849 aa17.08■□□□□ 0.33
CTSD-210ENST00000637381 NRXN2Q9P2S2 1712 aa17.08■□□□□ 0.32
CTSD-210ENST00000637381 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
CTSD-210ENST00000637381 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
CTSD-210ENST00000637381 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
CTSD-210ENST00000637381 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms