RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
CTSD-209ENST00000637158 ITPK1Q13572 414 aa25.06■■□□□ 1.6
CTSD-209ENST00000637158 GPBP1L1Q9HC44 474 aaPredicted RBP25.06■■□□□ 1.6
CTSD-209ENST00000637158 DCAF5Q96JK2 942 aa25.05■■□□□ 1.6
CTSD-209ENST00000637158 EIF4G2P78344 907 aaKnown RBP eCLIP25.04■■□□□ 1.6
CTSD-209ENST00000637158 PLEKHO1Q53GL0 409 aaPredicted RBP25.04■■□□□ 1.6
CTSD-209ENST00000637158 SMIM5Q71RC9 77 aa25.04■■□□□ 1.6
CTSD-209ENST00000637158 RTCBQ9Y3I0 505 aaKnown RBP25.04■■□□□ 1.6
CTSD-209ENST00000637158 AMOTQ4VCS5 1084 aa25.03■■□□□ 1.6
CTSD-209ENST00000637158 TRAPPC3LQ5T215 181 aa25.03■■□□□ 1.6
CTSD-209ENST00000637158 NLGN1Q8N2Q7 840 aa25.02■■□□□ 1.6
CTSD-209ENST00000637158 ADRA2BP18089 450 aa25.01■■□□□ 1.59
CTSD-209ENST00000637158 RC3H1Q5TC82 1133 aaKnown RBP25.01■■□□□ 1.59
CTSD-209ENST00000637158 PANK3Q9H999 370 aa25■■□□□ 1.59
CTSD-209ENST00000637158 ADCY9O60503 1353 aa24.99■■□□□ 1.59
CTSD-209ENST00000637158 MMP10P09238 476 aa24.99■■□□□ 1.59
CTSD-209ENST00000637158 RBM42Q9BTD8 480 aaKnown RBP24.99■■□□□ 1.59
CTSD-209ENST00000637158 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
CTSD-209ENST00000637158 KDRP35968 1356 aa24.98■■□□□ 1.59
CTSD-209ENST00000637158 TGFB2P61812 414 aa24.98■■□□□ 1.59
CTSD-209ENST00000637158 CABP4P57796 275 aa24.97■■□□□ 1.59
CTSD-209ENST00000637158 ZNF530Q6P9A1 599 aaPredicted RBP24.96■■□□□ 1.59
CTSD-209ENST00000637158 ZNF831Q5JPB2 1677 aa24.96■■□□□ 1.59
CTSD-209ENST00000637158 CNTNAP4Q9C0A0 1308 aa24.95■■□□□ 1.58
CTSD-209ENST00000637158 RFC4P35249 363 aa24.95■■□□□ 1.58
CTSD-209ENST00000637158 MTHFSP49914 203 aa24.95■■□□□ 1.58
CTSD-209ENST00000637158 C1orf141Q5JVX7 400 aa24.95■■□□□ 1.58
CTSD-209ENST00000637158 MORC1Q86VD1 984 aa24.95■■□□□ 1.58
CTSD-209ENST00000637158 RPS6KA4O75676 772 aa24.94■■□□□ 1.58
CTSD-209ENST00000637158 HSPA5P11021 654 aaKnown RBP24.94■■□□□ 1.58
CTSD-209ENST00000637158 ARHGEF1Q92888 912 aaKnown RBP24.94■■□□□ 1.58
CTSD-209ENST00000637158 SLC4A9Q96Q91 983 aa24.94■■□□□ 1.58
CTSD-209ENST00000637158 WWC3Q9ULE0 1092 aa24.94■■□□□ 1.58
CTSD-209ENST00000637158 ZNF526Q8TF50 670 aaPredicted RBP24.93■■□□□ 1.58
CTSD-209ENST00000637158 CCDC87Q9NVE4 849 aa24.93■■□□□ 1.58
CTSD-209ENST00000637158 KNSTRNQ9Y448 316 aa24.9■■□□□ 1.58
CTSD-209ENST00000637158 PARP3Q9Y6F1 533 aa24.9■■□□□ 1.58
CTSD-209ENST00000637158 KDM6AO15550 1401 aaPredicted RBP24.89■■□□□ 1.58
CTSD-209ENST00000637158 GYS1P13807 737 aa24.89■■□□□ 1.58
CTSD-209ENST00000637158 PXDNLA1KZ92 1463 aa24.89■■□□□ 1.57
CTSD-209ENST00000637158 HSPA6P17066 643 aa24.88■■□□□ 1.57
CTSD-209ENST00000637158 NFATC2IPQ8NCF5 419 aa24.88■■□□□ 1.57
CTSD-209ENST00000637158 BCS1LQ9Y276 419 aa24.88■■□□□ 1.57
CTSD-209ENST00000637158 KIF13BQ9NQT8 1826 aa24.87■■□□□ 1.57
CTSD-209ENST00000637158 A0A0G2JLW4 131 aa24.87■■□□□ 1.57
CTSD-209ENST00000637158 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
CTSD-209ENST00000637158 C10orf71Q711Q0 1435 aa24.86■■□□□ 1.57
CTSD-209ENST00000637158 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
CTSD-209ENST00000637158 PTCD1O75127 700 aaKnown RBP24.86■■□□□ 1.57
CTSD-209ENST00000637158 AEBP1Q8IUX7 1158 aa24.86■■□□□ 1.57
CTSD-209ENST00000637158 COL5A3P25940 1745 aaPredicted RBP24.85■■□□□ 1.57
CTSD-209ENST00000637158 IL13P35225 146 aa24.83■■□□□ 1.57
CTSD-209ENST00000637158 CRKLP46109 303 aaKnown RBP24.83■■□□□ 1.57
CTSD-209ENST00000637158 KIF3CO14782 793 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 FCHSD2O94868 740 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 C4AP0C0L4 1744 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 DPEP1P16444 411 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 AKAP4Q5JQC9 854 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 ARHGAP27Q6ZUM4 889 aa24.82■■□□□ 1.56
CTSD-209ENST00000637158 PIM2Q9P1W9 311 aa24.8■■□□□ 1.56
CTSD-209ENST00000637158 USP42Q9H9J4 1324 aaKnown RBP24.8■■□□□ 1.56
CTSD-209ENST00000637158 KIAA1551Q9HCM1 1747 aa24.78■■□□□ 1.56
CTSD-209ENST00000637158 N4BP2Q86UW6 1770 aaPredicted RBP24.78■■□□□ 1.56
CTSD-209ENST00000637158 MYH14Q7Z406 1995 aaKnown RBP24.78■■□□□ 1.56
CTSD-209ENST00000637158 TOMM70O94826 608 aa24.77■■□□□ 1.56
CTSD-209ENST00000637158 IFFO2Q5TF58 517 aa24.77■■□□□ 1.56
CTSD-209ENST00000637158 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
CTSD-209ENST00000637158 SLC52A2Q9HAB3 445 aa24.77■■□□□ 1.56
CTSD-209ENST00000637158 ZPR1O75312 459 aa24.76■■□□□ 1.55
CTSD-209ENST00000637158 KCNA3P22001 575 aa24.76■■□□□ 1.55
CTSD-209ENST00000637158 FKBP8Q14318 412 aa24.76■■□□□ 1.55
CTSD-209ENST00000637158 AMER1Q5JTC6 1135 aaPredicted RBP24.76■■□□□ 1.55
CTSD-209ENST00000637158 DALRD3Q5D0E6 543 aaKnown RBP24.75■■□□□ 1.55
CTSD-209ENST00000637158 INTS5Q6P9B9 1019 aaKnown RBP24.75■■□□□ 1.55
CTSD-209ENST00000637158 SRP68Q9UHB9 627 aaKnown RBP24.75■■□□□ 1.55
CTSD-209ENST00000637158 APLP1P51693 650 aa24.73■■□□□ 1.55
CTSD-209ENST00000637158 SCN11AQ9UI33 1791 aa24.72■■□□□ 1.55
CTSD-209ENST00000637158 RNMTO43148 476 aaKnown RBP24.71■■□□□ 1.55
CTSD-209ENST00000637158 TM4SF1P30408 202 aa24.71■■□□□ 1.55
CTSD-209ENST00000637158 DDR1Q08345 913 aa24.71■■□□□ 1.55
CTSD-209ENST00000637158 DNAJC10Q8IXB1 793 aa24.71■■□□□ 1.55
CTSD-209ENST00000637158 LGR6Q9HBX8 967 aa24.71■■□□□ 1.55
CTSD-209ENST00000637158 POLRMTO00411 1230 aaKnown RBP24.7■■□□□ 1.54
CTSD-209ENST00000637158 C9orf131Q5VYM1 1079 aa24.7■■□□□ 1.54
CTSD-209ENST00000637158 BRCA1P38398 1863 aaKnown RBP24.7■■□□□ 1.54
CTSD-209ENST00000637158 TJP1Q07157 1748 aa24.69■■□□□ 1.54
CTSD-209ENST00000637158 USPL1Q5W0Q7 1092 aa24.69■■□□□ 1.54
CTSD-209ENST00000637158 VSIG10Q8N0Z9 540 aa24.69■■□□□ 1.54
CTSD-209ENST00000637158 SOS1Q07889 1333 aaPredicted RBP24.68■■□□□ 1.54
CTSD-209ENST00000637158 DIAPH1O60610 1272 aaKnown RBP24.68■■□□□ 1.54
CTSD-209ENST00000637158 HMOX1P09601 288 aa24.68■■□□□ 1.54
CTSD-209ENST00000637158 CYP19A1P11511 503 aaPredicted RBP24.68■■□□□ 1.54
CTSD-209ENST00000637158 NARFQ9UHQ1 456 aa24.68■■□□□ 1.54
CTSD-209ENST00000637158 ARFGEF1Q9Y6D6 1849 aa24.68■■□□□ 1.54
CTSD-209ENST00000637158 C16orf71Q8IYS4 520 aaPredicted RBP24.67■■□□□ 1.54
CTSD-209ENST00000637158 KIF7Q2M1P5 1343 aa24.66■■□□□ 1.54
CTSD-209ENST00000637158 KDM2BQ8NHM5 1336 aa24.66■■□□□ 1.54
CTSD-209ENST00000637158 MRC1P22897 1456 aa24.66■■□□□ 1.54
CTSD-209ENST00000637158 SLC39A6Q13433 755 aa24.66■■□□□ 1.54
CTSD-209ENST00000637158 NMRK2Q9NPI5 230 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms