RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 C5P01031 1676 aa21.89■■□□□ 1.1
CACNA1A-229ENST00000636670 EIF4A2Q14240 407 aaKnown RBP21.89■■□□□ 1.09
CACNA1A-229ENST00000636670 ZCRB1Q8TBF4 217 aaKnown RBP21.89■■□□□ 1.09
CACNA1A-229ENST00000636670 MTHFSP49914 203 aa21.86■■□□□ 1.09
CACNA1A-229ENST00000636670 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
CACNA1A-229ENST00000636670 USHBP1Q8N6Y0 703 aa21.86■■□□□ 1.09
CACNA1A-229ENST00000636670 RAPGEF4Q8WZA2 1011 aa21.85■■□□□ 1.09
CACNA1A-229ENST00000636670 AK7Q96M32 723 aa21.85■■□□□ 1.09
CACNA1A-229ENST00000636670 EYA1Q99502 592 aa21.85■■□□□ 1.09
CACNA1A-229ENST00000636670 PCNTO95613 3336 aa21.85■■□□□ 1.09
CACNA1A-229ENST00000636670 ZNF316A6NFI3 1004 aaPredicted RBP21.84■■□□□ 1.09
CACNA1A-229ENST00000636670 CNGB1Q14028 1251 aaPredicted RBP21.84■■□□□ 1.09
CACNA1A-229ENST00000636670 TOGARAM1Q9Y4F4 1720 aa21.83■■□□□ 1.09
CACNA1A-229ENST00000636670 VIRMAQ69YN4 1812 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-229ENST00000636670 ARHGAP27Q6ZUM4 889 aa21.83■■□□□ 1.09
CACNA1A-229ENST00000636670 BCS1LQ9Y276 419 aa21.83■■□□□ 1.09
CACNA1A-229ENST00000636670 KDRP35968 1356 aa21.83■■□□□ 1.08
CACNA1A-229ENST00000636670 TATP17735 454 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-229ENST00000636670 TGFB2P61812 414 aa21.82■■□□□ 1.08
CACNA1A-229ENST00000636670 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 PHF14O94880 888 aa21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 HSPA1AP0DMV8 641 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 HSPA1BP0DMV9 641 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 PALLDQ8WX93 1383 aa21.81■■□□□ 1.08
CACNA1A-229ENST00000636670 ITGB4P16144 1822 aa21.8■■□□□ 1.08
CACNA1A-229ENST00000636670 PPP2R1AP30153 589 aa21.8■■□□□ 1.08
CACNA1A-229ENST00000636670 IL13P35225 146 aa21.8■■□□□ 1.08
CACNA1A-229ENST00000636670 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
CACNA1A-229ENST00000636670 SSFA2P28290 1259 aa21.79■■□□□ 1.08
CACNA1A-229ENST00000636670 C4BP0C0L5 1744 aa21.79■■□□□ 1.08
CACNA1A-229ENST00000636670 KDM2BQ8NHM5 1336 aa21.79■■□□□ 1.08
CACNA1A-229ENST00000636670 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
CACNA1A-229ENST00000636670 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
CACNA1A-229ENST00000636670 PXDNLA1KZ92 1463 aa21.78■■□□□ 1.08
CACNA1A-229ENST00000636670 DIAPH1O60610 1272 aaKnown RBP21.77■■□□□ 1.08
CACNA1A-229ENST00000636670 C9orf131Q5VYM1 1079 aa21.77■■□□□ 1.08
CACNA1A-229ENST00000636670 CFAP53Q96M91 514 aa21.77■■□□□ 1.08
CACNA1A-229ENST00000636670 RALBP1Q15311 655 aa21.76■■□□□ 1.07
CACNA1A-229ENST00000636670 SMC1BQ8NDV3 1235 aa21.76■■□□□ 1.07
CACNA1A-229ENST00000636670 SMARCC1Q92922 1105 aaPredicted RBP21.76■■□□□ 1.07
CACNA1A-229ENST00000636670 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 C10orf71Q711Q0 1435 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 A0A0G2JLW4 131 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 MPRIPQ6WCQ1 1025 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 SMIM5Q71RC9 77 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 RRAGCQ9HB90 399 aa21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
CACNA1A-229ENST00000636670 SCN11AQ9UI33 1791 aa21.74■■□□□ 1.07
CACNA1A-229ENST00000636670 PCDH10Q9P2E7 1040 aa21.74■■□□□ 1.07
CACNA1A-229ENST00000636670 FCHSD2O94868 740 aa21.73■■□□□ 1.07
CACNA1A-229ENST00000636670 MMP10P09238 476 aa21.73■■□□□ 1.07
CACNA1A-229ENST00000636670 KIF13BQ9NQT8 1826 aa21.73■■□□□ 1.07
CACNA1A-229ENST00000636670 KCPQ6ZWJ8 1503 aa21.72■■□□□ 1.07
CACNA1A-229ENST00000636670 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
CACNA1A-229ENST00000636670 SPG7Q9UQ90 795 aa21.72■■□□□ 1.07
CACNA1A-229ENST00000636670 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
CACNA1A-229ENST00000636670 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
CACNA1A-229ENST00000636670 MYBBP1AQ9BQG0 1328 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-229ENST00000636670 N4BP2Q86UW6 1770 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-229ENST00000636670 KIAA1551Q9HCM1 1747 aa21.7■■□□□ 1.06
CACNA1A-229ENST00000636670 DPEP1P16444 411 aa21.68■■□□□ 1.06
CACNA1A-229ENST00000636670 CYP27B1O15528 508 aa21.67■■□□□ 1.06
CACNA1A-229ENST00000636670 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
CACNA1A-229ENST00000636670 PRKRIP1Q9H875 184 aaPredicted RBP21.67■■□□□ 1.06
CACNA1A-229ENST00000636670 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
CACNA1A-229ENST00000636670 U2SURPO15042 1029 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 GNPATO15228 680 aa21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 NLGN1Q8N2Q7 840 aa21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 RNF181Q9P0P0 153 aa21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 TNRC6CQ9HCJ0 1690 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-229ENST00000636670 HMOX1P09601 288 aa21.65■■□□□ 1.06
CACNA1A-229ENST00000636670 PLEKHO1Q53GL0 409 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-229ENST00000636670 CCDC87Q9NVE4 849 aa21.65■■□□□ 1.06
CACNA1A-229ENST00000636670 DLG5Q8TDM6 1919 aa21.65■■□□□ 1.06
CACNA1A-229ENST00000636670 LOC102724428A0A0B4J2F2 783 aa21.64■■□□□ 1.05
CACNA1A-229ENST00000636670 PHKG2P15735 406 aa21.64■■□□□ 1.05
CACNA1A-229ENST00000636670 SIK1P57059 783 aa21.64■■□□□ 1.05
CACNA1A-229ENST00000636670 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.05
CACNA1A-229ENST00000636670 NKX1-1Q15270 411 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-229ENST00000636670 PIGBQ92521 554 aa21.63■■□□□ 1.05
CACNA1A-229ENST00000636670 PIM2Q9P1W9 311 aa21.63■■□□□ 1.05
CACNA1A-229ENST00000636670 KCNA3P22001 575 aa21.62■■□□□ 1.05
CACNA1A-229ENST00000636670 ZNF530Q6P9A1 599 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-229ENST00000636670 MRC1P22897 1456 aa21.62■■□□□ 1.05
CACNA1A-229ENST00000636670 BRCA1P38398 1863 aaKnown RBP21.62■■□□□ 1.05
CACNA1A-229ENST00000636670 KDM6AO15550 1401 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-229ENST00000636670 SIPA1L3O60292 1781 aaPredicted RBP21.61■■□□□ 1.05
CACNA1A-229ENST00000636670 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
CACNA1A-229ENST00000636670 ARFGEF1Q9Y6D6 1849 aa21.61■■□□□ 1.05
CACNA1A-229ENST00000636670 HSP90AB1P08238 724 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-229ENST00000636670 TRAPPC3LQ5T215 181 aa21.6■■□□□ 1.05
CACNA1A-229ENST00000636670 VEGFAP15692 232 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-229ENST00000636670 ATP6V1AP38606 617 aa21.59■■□□□ 1.05
CACNA1A-229ENST00000636670 DALRD3Q5D0E6 543 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-229ENST00000636670 RSPH6AQ9H0K4 717 aa21.59■■□□□ 1.05
CACNA1A-229ENST00000636670 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
CACNA1A-229ENST00000636670 U2AF1L5P0DN76 240 aaPredicted RBP21.58■■□□□ 1.05
CACNA1A-229ENST00000636670 U2AF1Q01081 240 aaKnown RBP eCLIP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms