RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 LINC00116Q8NCU8 138 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 PIGBQ92521 554 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 PUS7Q96PZ0 661 aaKnown RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 CDCA7Q9BWT1 371 aaPredicted RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 MTFR1LQ9H019 292 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 CCNL1Q9UK58 526 aaPredicted RBP2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 KCPQ6ZWJ8 1503 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 PSME4Q14997 1843 aa2.26□□□□□ -2.05
SYNGAP1-216ENST00000636640 SMG6Q86US8 1419 aaKnown RBP2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 RTL1A6NKG5 1358 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 FLT4P35916 1363 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 KDRP35968 1356 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 PALLDQ8WX93 1383 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 COL4A1P02462 1669 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 CASP8AP2Q9UKL3 1982 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 WASHC2AQ641Q2 1341 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 MSH5O43196 834 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 PHF14O94880 888 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 PHKG2P15735 406 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 TATP17735 454 aaPredicted RBP2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 TMF1P82094 1093 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 NKX1-1Q15270 411 aaPredicted RBP2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 PANK3Q9H999 370 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 LGR6Q9HBX8 967 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 ATG3Q9NT62 314 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 TFCP2L1Q9NZI6 479 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 SRP68Q9UHB9 627 aaKnown RBP2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 PXDNLA1KZ92 1463 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 CACNA1FO60840 1977 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 SCN9AQ15858 1988 aa2.25□□□□□ -2.05
SYNGAP1-216ENST00000636640 MAP3K5Q99683 1374 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 SCN4AP35499 1836 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 IGSF1Q8N6C5 1336 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 HMOX1P09601 288 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 KCNA3P22001 575 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 PRELPP51888 382 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 SLC39A6Q13433 755 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 GPR162Q16538 588 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 SLC27A3Q5K4L6 730 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 SLC51AQ86UW1 340 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 ZNF526Q8TF50 670 aaPredicted RBP2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 RAPGEF4Q8WZA2 1011 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 LTBP1Q14766 1721 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 MRC1P22897 1456 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 AKAP11Q9UKA4 1901 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 MYO5AQ9Y4I1 1855 aaKnown RBP2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 TNRC18O15417 2968 aaPredicted RBP2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 ATP10DQ9P241 1426 aa2.24□□□□□ -2.05
SYNGAP1-216ENST00000636640 ADCY9O60503 1353 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 CARMIL3Q8ND23 1372 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 ADAMTSL1Q8N6G6 1762 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 KIF7Q2M1P5 1343 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PCDH11XQ9BZA7 1347 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PCDH11YQ9BZA8 1340 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 MYH13Q9UKX3 1938 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PCNTO95613 3336 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 COL4A5P29400 1685 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 LOC102724428A0A0B4J2F2 783 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 A0A0G2JLW4 131 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PRAMEF22A3QJZ6 481 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 GNPATO15228 680 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PER1O15534 1290 aaPredicted RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 KCNQ3O43525 872 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PTCD1O75127 700 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 IL13P35225 146 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 ATP6V1AP38606 617 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 PIP4K2AP48426 406 aaPredicted RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 SIK1P57059 783 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 C1QTNF8P60827 252 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 HTRA3P83110 453 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 DDR1Q08345 913 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 FKBP8Q14318 412 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 AMER1Q5JTC6 1135 aaPredicted RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 CC2D1BQ5T0F9 858 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 SULT6B1Q6IMI4 303 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 ZNF530Q6P9A1 599 aaPredicted RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 INTS5Q6P9B9 1019 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 DNAJC10Q8IXB1 793 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 CCDC24Q8N4L8 307 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 NFATC2IPQ8NCF5 419 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 SLC16A10Q8TF71 515 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 ARHGEF1Q92888 912 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 RBM42Q9BTD8 480 aaKnown RBP2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 BCL2L12Q9HB09 334 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 ECM29Q5VYK3 1845 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 C10orf71Q711Q0 1435 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 KIF24Q5T7B8 1368 aa2.23□□□□□ -2.05
SYNGAP1-216ENST00000636640 LRRC37AA6NMS7 1700 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CGNL1Q0VF96 1302 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 SENP3-EIF4A1A0A087X0R7 540 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 KIF3CO14782 793 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 MMP10P09238 476 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 GYS1P13807 737 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 DPEP1P16444 411 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 POLD1P28340 1107 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CHRNA5P30532 468 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 CRKLP46109 303 aaKnown RBP2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 MTHFSP49914 203 aa2.22□□□□□ -2.05
SYNGAP1-216ENST00000636640 EIF4G2P78344 907 aaKnown RBP eCLIP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms