RNA–Protein interactions for RNA: ENST00000636405.1

CLN5-209, Transcript of CLN5, intracellular trafficking protein, humanhuman

Gene CLN5, Length 2,511 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-209ENST00000636405 RBM42Q9BTD8 480 aaKnown RBP18.62■□□□□ 0.57
CLN5-209ENST00000636405 GNAI2P04899 355 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 HSPA2P54652 639 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 EIF4A1P60842 406 aaKnown RBP18.61■□□□□ 0.57
CLN5-209ENST00000636405 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 TEFQ10587 303 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 TTC22Q5TAA0 569 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 USP54Q70EL1 1684 aa18.61■□□□□ 0.57
CLN5-209ENST00000636405 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
CLN5-209ENST00000636405 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
CLN5-209ENST00000636405 CHPF2Q9P2E5 772 aa18.6■□□□□ 0.57
CLN5-209ENST00000636405 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
CLN5-209ENST00000636405 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
CLN5-209ENST00000636405 PLEKHO1Q53GL0 409 aaPredicted RBP18.6■□□□□ 0.57
CLN5-209ENST00000636405 LRRFIP2Q9Y608 721 aaKnown RBP18.6■□□□□ 0.57
CLN5-209ENST00000636405 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 KIF2CQ99661 725 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 C1orf167Q5SNV9 1468 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 CDC45O75419 566 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 PXDNQ92626 1479 aa18.59■□□□□ 0.57
CLN5-209ENST00000636405 CD2BP2O95400 341 aaKnown RBP18.58■□□□□ 0.56
CLN5-209ENST00000636405 SDSP20132 328 aa18.58■□□□□ 0.56
CLN5-209ENST00000636405 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
CLN5-209ENST00000636405 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
CLN5-209ENST00000636405 HMMRO75330 724 aa18.57■□□□□ 0.56
CLN5-209ENST00000636405 ATF3P18847 181 aa18.57■□□□□ 0.56
CLN5-209ENST00000636405 C1orf141Q5JVX7 400 aa18.57■□□□□ 0.56
CLN5-209ENST00000636405 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
CLN5-209ENST00000636405 HSCBQ8IWL3 235 aa18.56■□□□□ 0.56
CLN5-209ENST00000636405 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
CLN5-209ENST00000636405 CHRNA2Q15822 529 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 BABAM1Q9NWV8 329 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 GNAI3P08754 354 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
CLN5-209ENST00000636405 ATP8B2P98198 1209 aa18.54■□□□□ 0.56
CLN5-209ENST00000636405 GSE1Q14687 1217 aa18.54■□□□□ 0.56
CLN5-209ENST00000636405 PROSER3Q2NL68 480 aa18.54■□□□□ 0.56
CLN5-209ENST00000636405 FAM208AQ9UK61 1670 aaKnown RBP18.53■□□□□ 0.56
CLN5-209ENST00000636405 UBTFL1P0CB47 393 aaPredicted RBP18.53■□□□□ 0.56
CLN5-209ENST00000636405 AMOTQ4VCS5 1084 aa18.53■□□□□ 0.56
CLN5-209ENST00000636405 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
CLN5-209ENST00000636405 PDE1AP54750 535 aa18.52■□□□□ 0.56
CLN5-209ENST00000636405 SLC39A6Q13433 755 aa18.52■□□□□ 0.56
CLN5-209ENST00000636405 ERBB3P21860 1342 aa18.52■□□□□ 0.55
CLN5-209ENST00000636405 IL1RAPL2Q9NP60 686 aa18.52■□□□□ 0.55
CLN5-209ENST00000636405 SLIT3O75094 1523 aa18.51■□□□□ 0.55
CLN5-209ENST00000636405 SRCIN1Q9C0H9 1055 aa18.51■□□□□ 0.55
CLN5-209ENST00000636405 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
CLN5-209ENST00000636405 HSP90AB1P08238 724 aaKnown RBP18.49■□□□□ 0.55
CLN5-209ENST00000636405 CSB-PGBD3P0DP91 1061 aa18.49■□□□□ 0.55
CLN5-209ENST00000636405 PPP1R42Q7Z4L9 355 aa18.49■□□□□ 0.55
CLN5-209ENST00000636405 DNAAF4Q8WXU2 420 aa18.49■□□□□ 0.55
CLN5-209ENST00000636405 MST1RQ04912 1400 aa18.49■□□□□ 0.55
CLN5-209ENST00000636405 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
CLN5-209ENST00000636405 SOS1Q07889 1333 aaPredicted RBP18.48■□□□□ 0.55
CLN5-209ENST00000636405 BEND3Q5T5X7 828 aa18.48■□□□□ 0.55
CLN5-209ENST00000636405 USP26Q9BXU7 913 aa18.48■□□□□ 0.55
CLN5-209ENST00000636405 TRPM3Q9HCF6 1732 aaPredicted RBP18.48■□□□□ 0.55
CLN5-209ENST00000636405 AIMP1Q12904 312 aaKnown RBP18.48■□□□□ 0.55
CLN5-209ENST00000636405 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
CLN5-209ENST00000636405 NUTM1Q86Y26 1132 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 RAPGEF4Q8WZA2 1011 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 SNX21Q969T3 373 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 DNAJC5Q9H3Z4 198 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
CLN5-209ENST00000636405 CHMP5Q9NZZ3 219 aa18.47■□□□□ 0.55
CLN5-209ENST00000636405 ADCY9O60503 1353 aa18.46■□□□□ 0.55
CLN5-209ENST00000636405 MAP3K2Q9Y2U5 619 aa18.46■□□□□ 0.55
CLN5-209ENST00000636405 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
CLN5-209ENST00000636405 CWF19L2Q2TBE0 894 aaKnown RBP18.46■□□□□ 0.55
CLN5-209ENST00000636405 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
CLN5-209ENST00000636405 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
CLN5-209ENST00000636405 IBTKQ9P2D0 1353 aaPredicted RBP18.45■□□□□ 0.54
CLN5-209ENST00000636405 MX1P20591 662 aa18.45■□□□□ 0.54
CLN5-209ENST00000636405 PIP4K2AP48426 406 aaPredicted RBP18.45■□□□□ 0.54
CLN5-209ENST00000636405 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
CLN5-209ENST00000636405 DBF4Q9UBU7 674 aaPredicted RBP18.45■□□□□ 0.54
CLN5-209ENST00000636405 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
CLN5-209ENST00000636405 MAP4K4O95819 1239 aaPredicted RBP18.45■□□□□ 0.54
CLN5-209ENST00000636405 SALL3Q9BXA9 1300 aa18.44■□□□□ 0.54
CLN5-209ENST00000636405 STRCP1A6NGW2 1772 aa18.44■□□□□ 0.54
CLN5-209ENST00000636405 HSP90AA1P07900 732 aaKnown RBP18.44■□□□□ 0.54
CLN5-209ENST00000636405 HOXB7P09629 217 aa18.44■□□□□ 0.54
CLN5-209ENST00000636405 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
CLN5-209ENST00000636405 SSH3Q8TE77 659 aa18.44■□□□□ 0.54
CLN5-209ENST00000636405 OSBPL3Q9H4L5 887 aa18.44■□□□□ 0.54
CLN5-209ENST00000636405 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
CLN5-209ENST00000636405 LMO7Q8WWI1 1683 aa18.43■□□□□ 0.54
CLN5-209ENST00000636405 MYL6BP14649 208 aa18.43■□□□□ 0.54
CLN5-209ENST00000636405 CASC1Q6TDU7 716 aa18.43■□□□□ 0.54
CLN5-209ENST00000636405 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
CLN5-209ENST00000636405 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
CLN5-209ENST00000636405 TATP17735 454 aaPredicted RBP18.42■□□□□ 0.54
CLN5-209ENST00000636405 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
CLN5-209ENST00000636405 PHKG2P15735 406 aa18.41■□□□□ 0.54
CLN5-209ENST00000636405 MCM4P33991 863 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms