RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 SIK1P57059 783 aa10.01□□□□□ -0.81
CACNA1A-222ENST00000636022 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
CACNA1A-222ENST00000636022 FLAD1Q8NFF5 587 aa10.01□□□□□ -0.81
CACNA1A-222ENST00000636022 ATG3Q9NT62 314 aa10.01□□□□□ -0.81
CACNA1A-222ENST00000636022 ERVV-2B6SEH9 535 aa10□□□□□ -0.81
CACNA1A-222ENST00000636022 ITPK1Q13572 414 aa10□□□□□ -0.81
CACNA1A-222ENST00000636022 PLEKHO1Q53GL0 409 aaPredicted RBP10□□□□□ -0.81
CACNA1A-222ENST00000636022 LINC00116Q8NCU8 138 aa10□□□□□ -0.81
CACNA1A-222ENST00000636022 KDRP35968 1356 aa10□□□□□ -0.81
CACNA1A-222ENST00000636022 ZNF831Q5JPB2 1677 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 KDM6AO15550 1401 aaPredicted RBP9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 SULT6B1Q6IMI4 303 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 NLGN2Q8NFZ4 835 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 DCAF5Q96JK2 942 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 AK7Q96M32 723 aa9.99□□□□□ -0.81
CACNA1A-222ENST00000636022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
CACNA1A-222ENST00000636022 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
CACNA1A-222ENST00000636022 ZNF530Q6P9A1 599 aaPredicted RBP9.98□□□□□ -0.81
CACNA1A-222ENST00000636022 SLC4A9Q96Q91 983 aa9.98□□□□□ -0.81
CACNA1A-222ENST00000636022 CEP350Q5VT06 3117 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 SSFA2P28290 1259 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 ATP6V1AP38606 617 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 MTHFSP49914 203 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 GPR162Q16538 588 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 KLHL34Q8N239 644 aa9.97□□□□□ -0.81
CACNA1A-222ENST00000636022 COL5A3P25940 1745 aaPredicted RBP9.96□□□□□ -0.81
CACNA1A-222ENST00000636022 MYH14Q7Z406 1995 aaKnown RBP9.96□□□□□ -0.81
CACNA1A-222ENST00000636022 PHF14O94880 888 aa9.96□□□□□ -0.82
CACNA1A-222ENST00000636022 ZNF784Q8NCA9 323 aaPredicted RBP9.96□□□□□ -0.82
CACNA1A-222ENST00000636022 CD2APQ9Y5K6 639 aa9.96□□□□□ -0.82
CACNA1A-222ENST00000636022 SCN11AQ9UI33 1791 aa9.96□□□□□ -0.82
CACNA1A-222ENST00000636022 GNPATO15228 680 aa9.95□□□□□ -0.82
CACNA1A-222ENST00000636022 YBX3P16989 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
CACNA1A-222ENST00000636022 NFATC2IPQ8NCF5 419 aa9.95□□□□□ -0.82
CACNA1A-222ENST00000636022 NPC1L1Q9UHC9 1359 aa9.95□□□□□ -0.82
CACNA1A-222ENST00000636022 CABP4P57796 275 aa9.94□□□□□ -0.82
CACNA1A-222ENST00000636022 C1orf141Q5JVX7 400 aa9.94□□□□□ -0.82
CACNA1A-222ENST00000636022 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-222ENST00000636022 RC3H1Q5TC82 1133 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-222ENST00000636022 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
CACNA1A-222ENST00000636022 VIRMAQ69YN4 1812 aaKnown RBP9.93□□□□□ -0.82
CACNA1A-222ENST00000636022 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
CACNA1A-222ENST00000636022 AKAP4Q5JQC9 854 aa9.93□□□□□ -0.82
CACNA1A-222ENST00000636022 CICQ96RK0 1608 aaPredicted RBP9.93□□□□□ -0.82
CACNA1A-222ENST00000636022 COL3A1P02461 1466 aaPredicted RBP9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 GRIN3BO60391 1043 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 DIAPH1O60610 1272 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 HMOX1P09601 288 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 ARHGEF1Q92888 912 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 LGR6Q9HBX8 967 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 RTCBQ9Y3I0 505 aaKnown RBP9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 TJP1Q07157 1748 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
CACNA1A-222ENST00000636022 MRC1P22897 1456 aa9.91□□□□□ -0.82
CACNA1A-222ENST00000636022 KIF13BQ9NQT8 1826 aa9.91□□□□□ -0.82
CACNA1A-222ENST00000636022 PTCD1O75127 700 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-222ENST00000636022 RPS6KA4O75676 772 aa9.91□□□□□ -0.82
CACNA1A-222ENST00000636022 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
CACNA1A-222ENST00000636022 C4AP0C0L4 1744 aa9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 RNMTO43148 476 aaKnown RBP9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 MMP10P09238 476 aa9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 GYS1P13807 737 aa9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 NLGN1Q8N2Q7 840 aa9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 SLC52A2Q9HAB3 445 aa9.9□□□□□ -0.82
CACNA1A-222ENST00000636022 CRKLP46109 303 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-222ENST00000636022 INTS5Q6P9B9 1019 aaKnown RBP9.89□□□□□ -0.83
CACNA1A-222ENST00000636022 KIAA1551Q9HCM1 1747 aa9.89□□□□□ -0.83
CACNA1A-222ENST00000636022 KCPQ6ZWJ8 1503 aa9.88□□□□□ -0.83
CACNA1A-222ENST00000636022 RFC4P35249 363 aa9.88□□□□□ -0.83
CACNA1A-222ENST00000636022 CNGB1Q14028 1251 aaPredicted RBP9.88□□□□□ -0.83
CACNA1A-222ENST00000636022 PXDNLA1KZ92 1463 aa9.87□□□□□ -0.83
CACNA1A-222ENST00000636022 SLC39A6Q13433 755 aa9.87□□□□□ -0.83
CACNA1A-222ENST00000636022 DNAJC10Q8IXB1 793 aa9.87□□□□□ -0.83
CACNA1A-222ENST00000636022 UBR2Q8IWV8 1755 aa9.87□□□□□ -0.83
CACNA1A-222ENST00000636022 C10orf71Q711Q0 1435 aa9.87□□□□□ -0.83
CACNA1A-222ENST00000636022 USP42Q9H9J4 1324 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 SIPA1L3O60292 1781 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 N4BP2Q86UW6 1770 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 U2SURPO15042 1029 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 CYP19A1P11511 503 aaPredicted RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 IL17REQ8NFR9 667 aa9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 ADCY9O60503 1353 aa9.86□□□□□ -0.83
CACNA1A-222ENST00000636022 SOS1Q07889 1333 aaPredicted RBP9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 A0A0G2JLW4 131 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 TGFB2P61812 414 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 DDR1Q08345 913 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 FKBP8Q14318 412 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 GAS2L2Q8NHY3 880 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 CCDC87Q9NVE4 849 aa9.85□□□□□ -0.83
CACNA1A-222ENST00000636022 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms