RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
NEDD4L-238ENST00000635997 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
NEDD4L-238ENST00000635997 GPTP24298 496 aa17.25■□□□□ 0.35
NEDD4L-238ENST00000635997 AACSQ86V21 672 aa17.25■□□□□ 0.35
NEDD4L-238ENST00000635997 NUTM1Q86Y26 1132 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 TESK2Q96S53 571 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 AAMPQ13685 434 aa17.24■□□□□ 0.35
NEDD4L-238ENST00000635997 TRIM29Q14134 588 aa17.23■□□□□ 0.35
NEDD4L-238ENST00000635997 CEP126Q9P2H0 1117 aa17.23■□□□□ 0.35
NEDD4L-238ENST00000635997 TBC1D2BQ9UPU7 963 aa17.23■□□□□ 0.35
NEDD4L-238ENST00000635997 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
NEDD4L-238ENST00000635997 CHD1LQ86WJ1 897 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 ADCY10Q96PN6 1610 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 EFCAB6Q5THR3 1501 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 ERICH2A1L162 156 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 CSPP1Q1MSJ5 1256 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 MYD88Q99836 296 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 TRMT112Q9UI30 125 aaKnown RBP17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 CT47B1P0C2W7 299 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 PDE4CQ08493 712 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
NEDD4L-238ENST00000635997 IGHMBP2P38935 993 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 LARP1Q6PKG0 1096 aaKnown RBP17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 BICD2Q8TD16 824 aa17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 JDP2Q8WYK2 163 aa17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
NEDD4L-238ENST00000635997 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 SHANK2Q9UPX8 1470 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 TRIM27P14373 513 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 GNL3LQ9NVN8 582 aaKnown RBP17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 PTMSP20962 102 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 CHAF1AQ13111 956 aaPredicted RBP17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
NEDD4L-238ENST00000635997 CWC27Q6UX04 472 aaKnown RBP17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 MSL1Q68DK7 614 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 MBIPQ9NS73 344 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 HECW2Q9P2P5 1572 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 DDX11L8A8MPP1 907 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
NEDD4L-238ENST00000635997 IP6K1Q92551 441 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 ARAP3Q8WWN8 1544 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 SIRT1Q96EB6 747 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 STK3Q13188 491 aa17.18■□□□□ 0.34
NEDD4L-238ENST00000635997 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 ERC1Q8IUD2 1116 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 SPATA31A6Q5VVP1 1343 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 PI4KAP2A4QPH2 592 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 BECN2A8MW95 431 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 FLIIQ13045 1269 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 PI4KAP1Q8N8J0 262 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 KDM5DQ9BY66 1539 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 LRRFIP2Q9Y608 721 aaKnown RBP17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
NEDD4L-238ENST00000635997 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 METP08581 1390 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 PCDH11XQ9BZA7 1347 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 PCDH11YQ9BZA8 1340 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 IDH1O75874 414 aaKnown RBP17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 BOLA2Q9H3K6 86 aa17.16■□□□□ 0.34
NEDD4L-238ENST00000635997 ABCC11Q96J66 1382 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 EIF4A2Q14240 407 aaKnown RBP17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 GJD4Q96KN9 370 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
NEDD4L-238ENST00000635997 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.34
NEDD4L-238ENST00000635997 TPM4P67936 248 aa17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 TPTE2Q6XPS3 522 aa17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
NEDD4L-238ENST00000635997 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms