RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 SMC5Q8IY18 1101 aa15.88■□□□□ 0.13
CACNA1A-219ENST00000635917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.88■□□□□ 0.13
CACNA1A-219ENST00000635917 EIF4A1P60842 406 aaKnown RBP15.87■□□□□ 0.13
CACNA1A-219ENST00000635917 MPRIPQ6WCQ1 1025 aa15.87■□□□□ 0.13
CACNA1A-219ENST00000635917 G2E3Q7L622 706 aa15.87■□□□□ 0.13
CACNA1A-219ENST00000635917 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
CACNA1A-219ENST00000635917 PDZRN3Q9UPQ7 1066 aa15.87■□□□□ 0.13
CACNA1A-219ENST00000635917 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
CACNA1A-219ENST00000635917 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-219ENST00000635917 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
CACNA1A-219ENST00000635917 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-219ENST00000635917 COL5A2P05997 1499 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-219ENST00000635917 RGS3P49796 1198 aa15.85■□□□□ 0.13
CACNA1A-219ENST00000635917 C8orf34Q49A92 452 aa15.85■□□□□ 0.13
CACNA1A-219ENST00000635917 ROBO1Q9Y6N7 1651 aa15.85■□□□□ 0.13
CACNA1A-219ENST00000635917 KCNQ3O43525 872 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 HOXB7P09629 217 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 CCDC30Q5VVM6 783 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 AHDC1Q5TGY3 1603 aaPredicted RBP15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 MRC1P22897 1456 aa15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 PARP4Q9UKK3 1724 aaKnown RBP15.84■□□□□ 0.13
CACNA1A-219ENST00000635917 WDR17Q8IZU2 1322 aa15.83■□□□□ 0.12
CACNA1A-219ENST00000635917 TEFQ10587 303 aa15.83■□□□□ 0.12
CACNA1A-219ENST00000635917 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-219ENST00000635917 ATP10DQ9P241 1426 aa15.83■□□□□ 0.12
CACNA1A-219ENST00000635917 PHKG2P15735 406 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 TATP17735 454 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 FLIIQ13045 1269 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 FAM161AQ3B820 660 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 STK31Q9BXU1 1019 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 PRDM11Q9NQV5 511 aa15.82■□□□□ 0.12
CACNA1A-219ENST00000635917 COL22A1Q8NFW1 1626 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-219ENST00000635917 CYP27B1O15528 508 aa15.81■□□□□ 0.12
CACNA1A-219ENST00000635917 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-219ENST00000635917 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
CACNA1A-219ENST00000635917 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
CACNA1A-219ENST00000635917 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
CACNA1A-219ENST00000635917 PXDNLA1KZ92 1463 aa15.8■□□□□ 0.12
CACNA1A-219ENST00000635917 F6X3S4 739 aa15.8■□□□□ 0.12
CACNA1A-219ENST00000635917 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
CACNA1A-219ENST00000635917 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
CACNA1A-219ENST00000635917 GIGYF1O75420 1035 aaPredicted RBP15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 NUCB1Q02818 461 aa15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 SLC52A2Q9HAB3 445 aa15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 C5P01031 1676 aa15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 MEIS3Q99687 375 aa15.78■□□□□ 0.12
CACNA1A-219ENST00000635917 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.11
CACNA1A-219ENST00000635917 GCC1Q96CN9 775 aa15.77■□□□□ 0.11
CACNA1A-219ENST00000635917 CARD10Q9BWT7 1032 aa15.77■□□□□ 0.11
CACNA1A-219ENST00000635917 GLI3P10071 1580 aa15.77■□□□□ 0.11
CACNA1A-219ENST00000635917 COL16A1Q07092 1604 aaPredicted RBP15.77■□□□□ 0.11
CACNA1A-219ENST00000635917 ANKRD44Q8N8A2 993 aa15.76■□□□□ 0.11
CACNA1A-219ENST00000635917 DCAF5Q96JK2 942 aa15.76■□□□□ 0.11
CACNA1A-219ENST00000635917 PHAXQ9H814 394 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-219ENST00000635917 FKBP5Q13451 457 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 ZNF790Q6PG37 636 aa15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
CACNA1A-219ENST00000635917 TOM1L2Q6ZVM7 507 aa15.74■□□□□ 0.11
CACNA1A-219ENST00000635917 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-219ENST00000635917 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 LARP1Q6PKG0 1096 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 NFATC2IPQ8NCF5 419 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 DCTPP1Q9H773 170 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 UBR2Q8IWV8 1755 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
CACNA1A-219ENST00000635917 PAPPAQ13219 1627 aa15.72■□□□□ 0.11
CACNA1A-219ENST00000635917 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
CACNA1A-219ENST00000635917 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-219ENST00000635917 SLC39A6Q13433 755 aa15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 ZCRB1Q8TBF4 217 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 DBF4Q9UBU7 674 aaPredicted RBP15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 ADCY9O60503 1353 aa15.71■□□□□ 0.11
CACNA1A-219ENST00000635917 IL2RBP14784 551 aa15.71■□□□□ 0.1
CACNA1A-219ENST00000635917 PDIA6Q15084 440 aa15.71■□□□□ 0.1
CACNA1A-219ENST00000635917 LNPKQ9C0E8 428 aa15.71■□□□□ 0.1
CACNA1A-219ENST00000635917 TOGARAM1Q9Y4F4 1720 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 ANXA1P04083 346 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 ANP32AP39687 249 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 PROSER3Q2NL68 480 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 USP44Q9H0E7 712 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 PHLPP1O60346 1717 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
CACNA1A-219ENST00000635917 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-219ENST00000635917 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
CACNA1A-219ENST00000635917 SEC24BO95487 1268 aa15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-219ENST00000635917 WNK3Q9BYP7 1800 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms