RNA–Protein interactions for RNA: ENST00000635904.1

CACNB4-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 2,444 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-217ENST00000635904 MYT1Q01538 1121 aa10.59□□□□□ -0.71
CACNB4-217ENST00000635904 SEPT12Q8IYM1 358 aa10.59□□□□□ -0.71
CACNB4-217ENST00000635904 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
CACNB4-217ENST00000635904 KDM3BQ7LBC6 1761 aa10.59□□□□□ -0.71
CACNB4-217ENST00000635904 CHL1O00533 1208 aa10.59□□□□□ -0.71
CACNB4-217ENST00000635904 MBIPQ9NS73 344 aa10.59□□□□□ -0.71
CACNB4-217ENST00000635904 GNAI1P63096 354 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 SLC52A2Q9HAB3 445 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 TEFQ10587 303 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 MYH16Q9H6N6 1097 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 MIS18AQ9NYP9 233 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 RGS12O14924 1447 aa10.58□□□□□ -0.72
CACNB4-217ENST00000635904 ERVV-2B6SEH9 535 aa10.57□□□□□ -0.72
CACNB4-217ENST00000635904 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
CACNB4-217ENST00000635904 NFATC2IPQ8NCF5 419 aa10.57□□□□□ -0.72
CACNB4-217ENST00000635904 LAS1LQ9Y4W2 734 aaKnown RBP10.57□□□□□ -0.72
CACNB4-217ENST00000635904 BCL9O00512 1426 aa10.57□□□□□ -0.72
CACNB4-217ENST00000635904 PAPPAQ13219 1627 aa10.57□□□□□ -0.72
CACNB4-217ENST00000635904 RXRBP28702 533 aa10.57□□□□□ -0.72
CACNB4-217ENST00000635904 BABAM1Q9NWV8 329 aa10.56□□□□□ -0.72
CACNB4-217ENST00000635904 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
CACNB4-217ENST00000635904 TSPYL4Q9UJ04 414 aa10.56□□□□□ -0.72
CACNB4-217ENST00000635904 SBF2Q86WG5 1849 aa10.56□□□□□ -0.72
CACNB4-217ENST00000635904 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
CACNB4-217ENST00000635904 CABP4P57796 275 aa10.55□□□□□ -0.72
CACNB4-217ENST00000635904 UBR2Q8IWV8 1755 aa10.55□□□□□ -0.72
CACNB4-217ENST00000635904 KCNQ3O43525 872 aa10.55□□□□□ -0.72
CACNB4-217ENST00000635904 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 PIGBQ92521 554 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 NHSQ6T4R5 1651 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 EXOSC9Q06265 439 aaKnown RBP10.54□□□□□ -0.72
CACNB4-217ENST00000635904 SLC39A6Q13433 755 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 TMOD3Q9NYL9 352 aa10.54□□□□□ -0.72
CACNB4-217ENST00000635904 NEFLP07196 543 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
CACNB4-217ENST00000635904 ZNF790Q6PG37 636 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 C8orf58Q8NAV2 365 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 ACSBG1Q96GR2 724 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 KCNQ2O43526 872 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 HEG1Q9ULI3 1381 aa10.53□□□□□ -0.72
CACNB4-217ENST00000635904 EIF4A1P60842 406 aaKnown RBP10.52□□□□□ -0.73
CACNB4-217ENST00000635904 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
CACNB4-217ENST00000635904 SYTL4Q96C24 671 aaPredicted RBP10.52□□□□□ -0.73
CACNB4-217ENST00000635904 BTAF1O14981 1849 aa10.52□□□□□ -0.73
CACNB4-217ENST00000635904 C5P01031 1676 aa10.51□□□□□ -0.73
CACNB4-217ENST00000635904 ZNF496Q96IT1 587 aaPredicted RBP10.51□□□□□ -0.73
CACNB4-217ENST00000635904 ASAP1Q9ULH1 1129 aa10.51□□□□□ -0.73
CACNB4-217ENST00000635904 ELL2O00472 640 aaPredicted RBP10.5□□□□□ -0.73
CACNB4-217ENST00000635904 VAMP4O75379 141 aa10.5□□□□□ -0.73
CACNB4-217ENST00000635904 TWISTNBQ3B726 338 aaPredicted RBP10.5□□□□□ -0.73
CACNB4-217ENST00000635904 ATG3Q9NT62 314 aa10.5□□□□□ -0.73
CACNB4-217ENST00000635904 CT47B1P0C2W7 299 aaPredicted RBP10.5□□□□□ -0.73
CACNB4-217ENST00000635904 FAM196AQ6ZSG2 479 aa10.49□□□□□ -0.73
CACNB4-217ENST00000635904 TTC5Q8N0Z6 440 aa10.49□□□□□ -0.73
CACNB4-217ENST00000635904 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
CACNB4-217ENST00000635904 PRAMEF22A3QJZ6 481 aa10.49□□□□□ -0.73
CACNB4-217ENST00000635904 GIGYF1O75420 1035 aaPredicted RBP10.49□□□□□ -0.73
CACNB4-217ENST00000635904 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
CACNB4-217ENST00000635904 HOXB7P09629 217 aa10.48□□□□□ -0.73
CACNB4-217ENST00000635904 RARSP54136 660 aaKnown RBP10.48□□□□□ -0.73
CACNB4-217ENST00000635904 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
CACNB4-217ENST00000635904 SOS1Q07889 1333 aaPredicted RBP10.48□□□□□ -0.73
CACNB4-217ENST00000635904 CICQ96RK0 1608 aaPredicted RBP10.47□□□□□ -0.73
CACNB4-217ENST00000635904 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CACNB4-217ENST00000635904 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 SLC4A9Q96Q91 983 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 PALLDQ8WX93 1383 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 TJP1Q07157 1748 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 SSH1Q8WYL5 1049 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 ZNF428Q96B54 188 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
CACNB4-217ENST00000635904 LY75O60449 1722 aa10.47□□□□□ -0.73
CACNB4-217ENST00000635904 CACNA1FO60840 1977 aa10.46□□□□□ -0.73
CACNB4-217ENST00000635904 BCAR3O75815 825 aa10.46□□□□□ -0.73
CACNB4-217ENST00000635904 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
CACNB4-217ENST00000635904 ZNF831Q5JPB2 1677 aa10.46□□□□□ -0.73
CACNB4-217ENST00000635904 TNS1Q9HBL0 1735 aaKnown RBP10.46□□□□□ -0.73
CACNB4-217ENST00000635904 SNRPA1P09661 255 aaKnown RBP10.46□□□□□ -0.74
CACNB4-217ENST00000635904 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 TRIM37O94972 964 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 ALDH1L2Q3SY69 923 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 HDGFL1Q5TGJ6 251 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
CACNB4-217ENST00000635904 TCERG1O14776 1098 aaKnown RBP10.45□□□□□ -0.74
CACNB4-217ENST00000635904 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
CACNB4-217ENST00000635904 SIK1P57059 783 aa10.44□□□□□ -0.74
CACNB4-217ENST00000635904 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
CACNB4-217ENST00000635904 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
CACNB4-217ENST00000635904 COL5A3P25940 1745 aaPredicted RBP10.44□□□□□ -0.74
CACNB4-217ENST00000635904 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
CACNB4-217ENST00000635904 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
CACNB4-217ENST00000635904 SMC4Q9NTJ3 1288 aa10.44□□□□□ -0.74
CACNB4-217ENST00000635904 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
CACNB4-217ENST00000635904 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
CACNB4-217ENST00000635904 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms