RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
PTPN11-206ENST00000635652 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 ITPK1Q13572 414 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 SULT6B1Q6IMI4 303 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 KIF7Q2M1P5 1343 aa17.19■□□□□ 0.34
PTPN11-206ENST00000635652 GNPATO15228 680 aa17.18■□□□□ 0.34
PTPN11-206ENST00000635652 SSFA2P28290 1259 aa17.18■□□□□ 0.34
PTPN11-206ENST00000635652 CABP4P57796 275 aa17.18■□□□□ 0.34
PTPN11-206ENST00000635652 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
PTPN11-206ENST00000635652 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
PTPN11-206ENST00000635652 MTHFSP49914 203 aa17.17■□□□□ 0.34
PTPN11-206ENST00000635652 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
PTPN11-206ENST00000635652 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
PTPN11-206ENST00000635652 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
PTPN11-206ENST00000635652 IL13P35225 146 aa17.15■□□□□ 0.34
PTPN11-206ENST00000635652 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.332e-7■■□□□ 13.2
PTPN11-206ENST00000635652 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
PTPN11-206ENST00000635652 CC2D1BQ5T0F9 858 aaKnown RBP17.13■□□□□ 0.33
PTPN11-206ENST00000635652 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
PTPN11-206ENST00000635652 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
PTPN11-206ENST00000635652 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
PTPN11-206ENST00000635652 CNGB1Q14028 1251 aaPredicted RBP17.12■□□□□ 0.33
PTPN11-206ENST00000635652 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
PTPN11-206ENST00000635652 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
PTPN11-206ENST00000635652 KDRP35968 1356 aa17.11■□□□□ 0.33
PTPN11-206ENST00000635652 PER1O15534 1290 aaPredicted RBP17.1■□□□□ 0.33
PTPN11-206ENST00000635652 HMOX1P09601 288 aa17.1■□□□□ 0.33
PTPN11-206ENST00000635652 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
PTPN11-206ENST00000635652 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
PTPN11-206ENST00000635652 ZNF831Q5JPB2 1677 aa17.08■□□□□ 0.32
PTPN11-206ENST00000635652 DIAPH1O60610 1272 aaKnown RBP17.08■□□□□ 0.32
PTPN11-206ENST00000635652 MMP10P09238 476 aa17.08■□□□□ 0.32
PTPN11-206ENST00000635652 RFC4P35249 363 aa17.08■□□□□ 0.32
PTPN11-206ENST00000635652 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
PTPN11-206ENST00000635652 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.32
PTPN11-206ENST00000635652 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
PTPN11-206ENST00000635652 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
PTPN11-206ENST00000635652 ADRA2BP18089 450 aa17.07■□□□□ 0.32
PTPN11-206ENST00000635652 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
PTPN11-206ENST00000635652 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
PTPN11-206ENST00000635652 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
PTPN11-206ENST00000635652 COL5A3P25940 1745 aaPredicted RBP17.07■□□□□ 0.32
PTPN11-206ENST00000635652 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
PTPN11-206ENST00000635652 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
PTPN11-206ENST00000635652 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
PTPN11-206ENST00000635652 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-206ENST00000635652 GYS1P13807 737 aa17.03■□□□□ 0.32
PTPN11-206ENST00000635652 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
PTPN11-206ENST00000635652 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
PTPN11-206ENST00000635652 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
PTPN11-206ENST00000635652 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
PTPN11-206ENST00000635652 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
PTPN11-206ENST00000635652 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
PTPN11-206ENST00000635652 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
PTPN11-206ENST00000635652 CICQ96RK0 1608 aaPredicted RBP17.01■□□□□ 0.31
PTPN11-206ENST00000635652 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
PTPN11-206ENST00000635652 C4AP0C0L4 1744 aa17■□□□□ 0.31
PTPN11-206ENST00000635652 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
PTPN11-206ENST00000635652 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
PTPN11-206ENST00000635652 TJP1Q07157 1748 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 TGFB2P61812 414 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
PTPN11-206ENST00000635652 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
PTPN11-206ENST00000635652 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
PTPN11-206ENST00000635652 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
PTPN11-206ENST00000635652 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
PTPN11-206ENST00000635652 FKBP8Q14318 412 aa16.97■□□□□ 0.31
PTPN11-206ENST00000635652 ZNF526Q8TF50 670 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-206ENST00000635652 GPBP1L1Q9HC44 474 aaPredicted RBP16.97■□□□□ 0.31
PTPN11-206ENST00000635652 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
PTPN11-206ENST00000635652 PXDNLA1KZ92 1463 aa16.97■□□□□ 0.31
PTPN11-206ENST00000635652 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
PTPN11-206ENST00000635652 ZPR1O75312 459 aa16.96■□□□□ 0.31
PTPN11-206ENST00000635652 DPEP1P16444 411 aa16.96■□□□□ 0.31
PTPN11-206ENST00000635652 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.3
PTPN11-206ENST00000635652 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-206ENST00000635652 MRC1P22897 1456 aa16.95■□□□□ 0.3
PTPN11-206ENST00000635652 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
PTPN11-206ENST00000635652 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
PTPN11-206ENST00000635652 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
PTPN11-206ENST00000635652 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
PTPN11-206ENST00000635652 FCHSD2O94868 740 aa16.94■□□□□ 0.3
PTPN11-206ENST00000635652 TEFQ10587 303 aa16.94■□□□□ 0.3
PTPN11-206ENST00000635652 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
PTPN11-206ENST00000635652 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
PTPN11-206ENST00000635652 DDR1Q08345 913 aa16.93■□□□□ 0.3
PTPN11-206ENST00000635652 USPL1Q5W0Q7 1092 aa16.93■□□□□ 0.3
PTPN11-206ENST00000635652 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
PTPN11-206ENST00000635652 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
PTPN11-206ENST00000635652 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
PTPN11-206ENST00000635652 KCPQ6ZWJ8 1503 aa16.92■□□□□ 0.3
PTPN11-206ENST00000635652 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
PTPN11-206ENST00000635652 IL17REQ8NFR9 667 aa16.92■□□□□ 0.3
PTPN11-206ENST00000635652 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
PTPN11-206ENST00000635652 ADCY9O60503 1353 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms