RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 MBIPQ9NS73 344 aa12.72□□□□□ -0.37
LINC01646-203ENST00000635556 EXOC5O00471 708 aa12.71□□□□□ -0.37
LINC01646-203ENST00000635556 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
LINC01646-203ENST00000635556 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
LINC01646-203ENST00000635556 LGR6Q9HBX8 967 aa12.71□□□□□ -0.37
LINC01646-203ENST00000635556 BCL9O00512 1426 aa12.71□□□□□ -0.38
LINC01646-203ENST00000635556 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
LINC01646-203ENST00000635556 TEFQ10587 303 aa12.7□□□□□ -0.38
LINC01646-203ENST00000635556 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
LINC01646-203ENST00000635556 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
LINC01646-203ENST00000635556 UBR2Q8IWV8 1755 aa12.69□□□□□ -0.38
LINC01646-203ENST00000635556 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
LINC01646-203ENST00000635556 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
LINC01646-203ENST00000635556 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
LINC01646-203ENST00000635556 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
LINC01646-203ENST00000635556 ITGB4P16144 1822 aa12.69□□□□□ -0.38
LINC01646-203ENST00000635556 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
LINC01646-203ENST00000635556 NHSQ6T4R5 1651 aa12.67□□□□□ -0.38
LINC01646-203ENST00000635556 RBM6P78332 1123 aaKnown RBP12.67□□□□□ -0.38
LINC01646-203ENST00000635556 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
LINC01646-203ENST00000635556 MARCH10Q8NA82 808 aaPredicted RBP12.67□□□□□ -0.38
LINC01646-203ENST00000635556 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
LINC01646-203ENST00000635556 BTBD11A6QL63 1104 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 CABP4P57796 275 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 ZNF428Q96B54 188 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 RCAN3Q9UKA8 241 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
LINC01646-203ENST00000635556 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
LINC01646-203ENST00000635556 RGS12O14924 1447 aa12.65□□□□□ -0.38
LINC01646-203ENST00000635556 A0A0G2JS52 829 aa12.65□□□□□ -0.38
LINC01646-203ENST00000635556 MYT1Q01538 1121 aa12.65□□□□□ -0.38
LINC01646-203ENST00000635556 SEPT12Q8IYM1 358 aa12.65□□□□□ -0.38
LINC01646-203ENST00000635556 CICQ96RK0 1608 aaPredicted RBP12.65□□□□□ -0.38
LINC01646-203ENST00000635556 RNF123Q5XPI4 1314 aa12.64□□□□□ -0.39
LINC01646-203ENST00000635556 HOXB7P09629 217 aa12.64□□□□□ -0.39
LINC01646-203ENST00000635556 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
LINC01646-203ENST00000635556 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
LINC01646-203ENST00000635556 RGS17Q9UGC6 210 aaPredicted RBP12.64□□□□□ -0.39
LINC01646-203ENST00000635556 C5P01031 1676 aa12.64□□□□□ -0.39
LINC01646-203ENST00000635556 EIF4A1P60842 406 aaKnown RBP12.63□□□□□ -0.39
LINC01646-203ENST00000635556 TWISTNBQ3B726 338 aaPredicted RBP12.63□□□□□ -0.39
LINC01646-203ENST00000635556 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
LINC01646-203ENST00000635556 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
LINC01646-203ENST00000635556 TMOD3Q9NYL9 352 aa12.63□□□□□ -0.39
LINC01646-203ENST00000635556 VAMP4O75379 141 aa12.62□□□□□ -0.39
LINC01646-203ENST00000635556 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
LINC01646-203ENST00000635556 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
LINC01646-203ENST00000635556 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
LINC01646-203ENST00000635556 SBF2Q86WG5 1849 aa12.62□□□□□ -0.39
LINC01646-203ENST00000635556 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
LINC01646-203ENST00000635556 KCNQ3O43525 872 aa12.61□□□□□ -0.39
LINC01646-203ENST00000635556 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
LINC01646-203ENST00000635556 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
LINC01646-203ENST00000635556 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
LINC01646-203ENST00000635556 RXRBP28702 533 aa12.6□□□□□ -0.39
LINC01646-203ENST00000635556 SLC39A6Q13433 755 aa12.6□□□□□ -0.39
LINC01646-203ENST00000635556 PIGBQ92521 554 aa12.6□□□□□ -0.39
LINC01646-203ENST00000635556 ZNF831Q5JPB2 1677 aa12.6□□□□□ -0.39
LINC01646-203ENST00000635556 BTAF1O14981 1849 aa12.6□□□□□ -0.39
LINC01646-203ENST00000635556 TJP1Q07157 1748 aa12.59□□□□□ -0.39
LINC01646-203ENST00000635556 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
LINC01646-203ENST00000635556 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
LINC01646-203ENST00000635556 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
LINC01646-203ENST00000635556 POTEAQ6S8J7 498 aa12.59□□□□□ -0.39
LINC01646-203ENST00000635556 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
LINC01646-203ENST00000635556 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
LINC01646-203ENST00000635556 KRT27Q7Z3Y8 459 aa12.58□□□□□ -0.4
LINC01646-203ENST00000635556 SSH1Q8WYL5 1049 aa12.58□□□□□ -0.4
LINC01646-203ENST00000635556 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
LINC01646-203ENST00000635556 SUPT16HQ9Y5B9 1047 aaKnown RBP12.58□□□□□ -0.4
LINC01646-203ENST00000635556 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
LINC01646-203ENST00000635556 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
LINC01646-203ENST00000635556 SYTL4Q96C24 671 aaPredicted RBP12.57□□□□□ -0.4
LINC01646-203ENST00000635556 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
LINC01646-203ENST00000635556 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
LINC01646-203ENST00000635556 ATG3Q9NT62 314 aa12.57□□□□□ -0.4
LINC01646-203ENST00000635556 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
LINC01646-203ENST00000635556 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
LINC01646-203ENST00000635556 BCAR3O75815 825 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
LINC01646-203ENST00000635556 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 VSIG10Q8N0Z9 540 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
LINC01646-203ENST00000635556 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 ASAP1Q9ULH1 1129 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 LY75O60449 1722 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
LINC01646-203ENST00000635556 RREB1Q92766 1687 aa12.55□□□□□ -0.4
LINC01646-203ENST00000635556 MYCNP04198 464 aaPredicted RBP12.55□□□□□ -0.4
LINC01646-203ENST00000635556 CCDC30Q5VVM6 783 aa12.55□□□□□ -0.4
LINC01646-203ENST00000635556 FAM196AQ6ZSG2 479 aa12.55□□□□□ -0.4
LINC01646-203ENST00000635556 MRPL50Q8N5N7 158 aaKnown RBP12.55□□□□□ -0.4
LINC01646-203ENST00000635556 ERBB4Q15303 1308 aa12.55□□□□□ -0.4
LINC01646-203ENST00000635556 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
LINC01646-203ENST00000635556 KCNQ2O43526 872 aa12.54□□□□□ -0.4
LINC01646-203ENST00000635556 SMARCC1Q92922 1105 aaPredicted RBP12.54□□□□□ -0.4
LINC01646-203ENST00000635556 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
LINC01646-203ENST00000635556 N4BP2Q86UW6 1770 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms