RNA–Protein interactions for RNA: ENST00000635257.1

GPATCH8-211, Transcript of G-patch domain containing 8, humanhuman

TSL 5

Gene GPATCH8, Length 5,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-211ENST00000635257 FAM107BQ9H098 131 aa13.38□□□□□ -0.27
GPATCH8-211ENST00000635257 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
GPATCH8-211ENST00000635257 ANKRD30BQ9BXX2 1392 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 CCDC196A0A1B0GTZ2 297 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 USO1O60763 962 aaKnown RBP13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 GLRX3O76003 335 aaKnown RBP13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 KIF1BPQ96EK5 621 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 FCHSD2O94868 740 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 GSTTP1A0A1W2PQM5 241 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 PHF23Q9BUL5 403 aaPredicted RBP13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 AKAP2Q9Y2D5 859 aa13.37□□□□□ -0.27
GPATCH8-211ENST00000635257 NEMFO60524 1076 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 CCDC178Q5BJE1 867 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 POTEB2H3BUK9 544 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 PLEKHH1Q9ULM0 1364 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 MX1P20591 662 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
GPATCH8-211ENST00000635257 KIF20AO95235 890 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 CBX1P83916 185 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 YEATS4O95619 227 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 RAB34Q9BZG1 259 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 NF2P35240 595 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 HOOK3Q86VS8 718 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
GPATCH8-211ENST00000635257 GOPCQ9HD26 462 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 NFE2L2Q16236 605 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 TMOD2Q9NZR1 351 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 TNNT1P13805 278 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 NAA15Q9BXJ9 866 aaKnown RBP13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 ABCF2Q9UG63 623 aa13.34□□□□□ -0.27
GPATCH8-211ENST00000635257 METTL24Q5JXM2 366 aa13.33□□□□□ -0.27
GPATCH8-211ENST00000635257 RNF187Q5TA31 235 aaPredicted RBP13.33□□□□□ -0.27
GPATCH8-211ENST00000635257 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.27
GPATCH8-211ENST00000635257 GSDMDP57764 484 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 CCDC175P0C221 793 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 SLFN5Q08AF3 891 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 RTEL1-TNFRSF6BF6WH68 1400 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 SPECC1Q5M775 1068 aa13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 BCCIPQ9P287 314 aaKnown RBP eCLIP13.33□□□□□ -0.28
GPATCH8-211ENST00000635257 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 GAPVD1Q14C86 1478 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 CTNNBL1Q8WYA6 563 aaPredicted RBP13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 CEP63Q96MT8 703 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 MKNK2Q9HBH9 465 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 IGF1RP08069 1367 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 PPM1EQ8WY54 764 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 DDX19AQ9NUU7 478 aaKnown RBP13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 ALS2CR12Q96Q35 445 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
GPATCH8-211ENST00000635257 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 NAPBQ9H115 298 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 ARHGAP5Q13017 1502 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 POLR3GO15318 223 aaPredicted RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 UBE4AQ14139 1066 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 GOLGA6L9A6NEM1 432 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 STARD3NLO95772 234 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 AFAP1Q8N556 730 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 CCDC150Q8NCX0 1101 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 UBA5Q9GZZ9 404 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 IFIT1P09914 478 aaKnown RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 TMPOP42166 694 aaKnown RBP13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 CAVIN4Q5BKX8 364 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 LIMCH1Q9UPQ0 1083 aa13.31□□□□□ -0.28
GPATCH8-211ENST00000635257 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 TICAM2Q86XR7 235 aa13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 SLC12A7Q9Y666 1083 aa13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 XPCQ01831 940 aaPredicted RBP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 SSRP1Q08945 709 aaKnown RBP13.3□□□□□ -0.28
GPATCH8-211ENST00000635257 IBSPP21815 317 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms