RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
SOX2-OT-257ENST00000630553 NBPF4Q96M43 638 aa14.03□□□□□ -0.16
SOX2-OT-257ENST00000630553 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
SOX2-OT-257ENST00000630553 CICQ96RK0 1608 aaPredicted RBP14.03□□□□□ -0.16
SOX2-OT-257ENST00000630553 UBR3Q6ZT12 1888 aa14.02□□□□□ -0.16
SOX2-OT-257ENST00000630553 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
SOX2-OT-257ENST00000630553 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
SOX2-OT-257ENST00000630553 GNPATO15228 680 aa14.02□□□□□ -0.17
SOX2-OT-257ENST00000630553 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
SOX2-OT-257ENST00000630553 PXDNLA1KZ92 1463 aa14.01□□□□□ -0.17
SOX2-OT-257ENST00000630553 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
SOX2-OT-257ENST00000630553 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
SOX2-OT-257ENST00000630553 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
SOX2-OT-257ENST00000630553 DPEP1P16444 411 aa14□□□□□ -0.17
SOX2-OT-257ENST00000630553 SIK1P57059 783 aa14□□□□□ -0.17
SOX2-OT-257ENST00000630553 LINC00116Q8NCU8 138 aa14□□□□□ -0.17
SOX2-OT-257ENST00000630553 TOGARAM1Q9Y4F4 1720 aa13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 HSPA1AP0DMV8 641 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 HSPA1BP0DMV9 641 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 PIGBQ92521 554 aa13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 CCDC87Q9NVE4 849 aa13.99□□□□□ -0.17
SOX2-OT-257ENST00000630553 TRAPPC3LQ5T215 181 aa13.98□□□□□ -0.17
SOX2-OT-257ENST00000630553 NLGN1Q8N2Q7 840 aa13.98□□□□□ -0.17
SOX2-OT-257ENST00000630553 RNF181Q9P0P0 153 aa13.98□□□□□ -0.17
SOX2-OT-257ENST00000630553 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
SOX2-OT-257ENST00000630553 CYP27B1O15528 508 aa13.97□□□□□ -0.17
SOX2-OT-257ENST00000630553 CARD14Q9BXL6 1004 aa13.97□□□□□ -0.17
SOX2-OT-257ENST00000630553 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
SOX2-OT-257ENST00000630553 ITGB4P16144 1822 aa13.97□□□□□ -0.17
SOX2-OT-257ENST00000630553 RTL1A6NKG5 1358 aa13.96□□□□□ -0.17
SOX2-OT-257ENST00000630553 TMOD3Q9NYL9 352 aa13.96□□□□□ -0.17
SOX2-OT-257ENST00000630553 PIM2Q9P1W9 311 aa13.96□□□□□ -0.17
SOX2-OT-257ENST00000630553 RTCBQ9Y3I0 505 aaKnown RBP13.96□□□□□ -0.17
SOX2-OT-257ENST00000630553 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
SOX2-OT-257ENST00000630553 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
SOX2-OT-257ENST00000630553 ITPK1Q13572 414 aa13.94□□□□□ -0.18
SOX2-OT-257ENST00000630553 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
SOX2-OT-257ENST00000630553 ASAP1Q9ULH1 1129 aa13.94□□□□□ -0.18
SOX2-OT-257ENST00000630553 C10orf71Q711Q0 1435 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 FYB1O15117 783 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 RFC4P35249 363 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 HSP90AB2PQ58FF8 381 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 SPG7Q9UQ90 795 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
SOX2-OT-257ENST00000630553 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
SOX2-OT-257ENST00000630553 PANK3Q9H999 370 aa13.92□□□□□ -0.18
SOX2-OT-257ENST00000630553 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
SOX2-OT-257ENST00000630553 KCNA3P22001 575 aa13.91□□□□□ -0.18
SOX2-OT-257ENST00000630553 ARHGEF1Q92888 912 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-257ENST00000630553 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
SOX2-OT-257ENST00000630553 GGNBP2Q9H3C7 697 aa13.91□□□□□ -0.18
SOX2-OT-257ENST00000630553 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
SOX2-OT-257ENST00000630553 ARFGEF1Q9Y6D6 1849 aa13.9□□□□□ -0.18
SOX2-OT-257ENST00000630553 NKX1-1Q15270 411 aaPredicted RBP13.9□□□□□ -0.18
SOX2-OT-257ENST00000630553 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
SOX2-OT-257ENST00000630553 INSRP06213 1382 aa13.9□□□□□ -0.18
SOX2-OT-257ENST00000630553 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
SOX2-OT-257ENST00000630553 SLC34A2O95436 690 aa13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 GYS1P13807 737 aa13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 AMER1Q5JTC6 1135 aaPredicted RBP13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 C4AP0C0L4 1744 aa13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 BRCA1P38398 1863 aaKnown RBP13.89□□□□□ -0.19
SOX2-OT-257ENST00000630553 FLT4P35916 1363 aa13.88□□□□□ -0.19
SOX2-OT-257ENST00000630553 CNKSR2Q8WXI2 1034 aa13.88□□□□□ -0.19
SOX2-OT-257ENST00000630553 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
SOX2-OT-257ENST00000630553 ATG3Q9NT62 314 aa13.88□□□□□ -0.19
SOX2-OT-257ENST00000630553 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
SOX2-OT-257ENST00000630553 CHRNA5P30532 468 aa13.86□□□□□ -0.19
SOX2-OT-257ENST00000630553 IFNL2Q8IZJ0 200 aa13.86□□□□□ -0.19
SOX2-OT-257ENST00000630553 SBF1O95248 1867 aa13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 GLTPD2A6NH11 291 aa13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 RASSF7Q02833 373 aa13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 RC3H1Q5TC82 1133 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 MKRN1Q9UHC7 482 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
SOX2-OT-257ENST00000630553 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
SOX2-OT-257ENST00000630553 PHKG2P15735 406 aa13.83□□□□□ -0.2
SOX2-OT-257ENST00000630553 LMNB1P20700 586 aa13.83□□□□□ -0.2
SOX2-OT-257ENST00000630553 AIDAQ96BJ3 306 aa13.83□□□□□ -0.2
SOX2-OT-257ENST00000630553 CNTNAP4Q9C0A0 1308 aa13.83□□□□□ -0.2
SOX2-OT-257ENST00000630553 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
SOX2-OT-257ENST00000630553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
SOX2-OT-257ENST00000630553 SRP68Q9UHB9 627 aaKnown RBP13.82□□□□□ -0.2
SOX2-OT-257ENST00000630553 NCAPD2Q15021 1401 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 FOXN1O15353 648 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 FKBP8Q14318 412 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 SLC4A9Q96Q91 983 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 EMILIN1Q9Y6C2 1016 aa13.81□□□□□ -0.2
SOX2-OT-257ENST00000630553 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
SOX2-OT-257ENST00000630553 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
SOX2-OT-257ENST00000630553 DDR1Q08345 913 aa13.8□□□□□ -0.2
SOX2-OT-257ENST00000630553 PRDM10Q9NQV6 1147 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms