RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 IFNL2Q8IZJ0 200 aa27.99■■■□□ 2.07
TARDBP-228ENST00000629725 EYA1Q99502 592 aa27.99■■■□□ 2.07
TARDBP-228ENST00000629725 PXDNLA1KZ92 1463 aa27.97■■■□□ 2.07
TARDBP-228ENST00000629725 PHKG2P15735 406 aa27.97■■■□□ 2.07
TARDBP-228ENST00000629725 ATG3Q9NT62 314 aa27.97■■■□□ 2.07
TARDBP-228ENST00000629725 KIAA1551Q9HCM1 1747 aa27.97■■■□□ 2.07
TARDBP-228ENST00000629725 TGFB2P61812 414 aa27.96■■■□□ 2.07
TARDBP-228ENST00000629725 TRAPPC3LQ5T215 181 aa27.95■■■□□ 2.06
TARDBP-228ENST00000629725 BCS1LQ9Y276 419 aa27.94■■■□□ 2.06
TARDBP-228ENST00000629725 RTCBQ9Y3I0 505 aaKnown RBP27.94■■■□□ 2.06
TARDBP-228ENST00000629725 APLP1P51693 650 aa27.93■■■□□ 2.06
TARDBP-228ENST00000629725 NLGN1Q8N2Q7 840 aa27.93■■■□□ 2.06
TARDBP-228ENST00000629725 A0A0G2JLW4 131 aa27.91■■■□□ 2.06
TARDBP-228ENST00000629725 TOMM70O94826 608 aa27.91■■■□□ 2.06
TARDBP-228ENST00000629725 ZNF831Q5JPB2 1677 aa27.91■■■□□ 2.06
TARDBP-228ENST00000629725 POLKQ9UBT6 870 aa27.9■■■□□ 2.06
TARDBP-228ENST00000629725 C10orf71Q711Q0 1435 aa27.9■■■□□ 2.06
TARDBP-228ENST00000629725 KDRP35968 1356 aa27.89■■■□□ 2.06
TARDBP-228ENST00000629725 COL5A3P25940 1745 aaPredicted RBP27.88■■■□□ 2.05
TARDBP-228ENST00000629725 BRCA1P38398 1863 aaKnown RBP27.88■■■□□ 2.05
TARDBP-228ENST00000629725 ARHGAP27Q6ZUM4 889 aa27.88■■■□□ 2.05
TARDBP-228ENST00000629725 RBM42Q9BTD8 480 aaKnown RBP27.88■■■□□ 2.05
TARDBP-228ENST00000629725 CCDC87Q9NVE4 849 aa27.88■■■□□ 2.05
TARDBP-228ENST00000629725 C4AP0C0L4 1744 aa27.87■■■□□ 2.05
TARDBP-228ENST00000629725 ADRA2BP18089 450 aa27.87■■■□□ 2.05
TARDBP-228ENST00000629725 ARHGEF1Q92888 912 aaKnown RBP27.87■■■□□ 2.05
TARDBP-228ENST00000629725 SLC4A9Q96Q91 983 aa27.87■■■□□ 2.05
TARDBP-228ENST00000629725 PLEKHG2Q9H7P9 1386 aa27.86■■■□□ 2.05
TARDBP-228ENST00000629725 ERVV-2B6SEH9 535 aa27.86■■■□□ 2.05
TARDBP-228ENST00000629725 RC3H1Q5TC82 1133 aaKnown RBP27.86■■■□□ 2.05
TARDBP-228ENST00000629725 FCHSD2O94868 740 aa27.85■■■□□ 2.05
TARDBP-228ENST00000629725 DPEP1P16444 411 aa27.85■■■□□ 2.05
TARDBP-228ENST00000629725 RFC4P35249 363 aa27.85■■■□□ 2.05
TARDBP-228ENST00000629725 EIF4A2Q14240 407 aaKnown RBP27.85■■■□□ 2.05
TARDBP-228ENST00000629725 GYS1P13807 737 aa27.84■■■□□ 2.05
TARDBP-228ENST00000629725 PARP3Q9Y6F1 533 aa27.84■■■□□ 2.05
TARDBP-228ENST00000629725 DNAJC5GQ8N7S2 189 aa27.83■■■□□ 2.05
TARDBP-228ENST00000629725 DCAF5Q96JK2 942 aa27.83■■■□□ 2.05
TARDBP-228ENST00000629725 NMRK2Q9NPI5 230 aa27.83■■■□□ 2.05
TARDBP-228ENST00000629725 CNTNAP4Q9C0A0 1308 aa27.83■■■□□ 2.05
TARDBP-228ENST00000629725 RPS6KA4O75676 772 aa27.82■■■□□ 2.04
TARDBP-228ENST00000629725 HSP90AB1P08238 724 aaKnown RBP27.82■■■□□ 2.04
TARDBP-228ENST00000629725 ARFGEF1Q9Y6D6 1849 aa27.82■■■□□ 2.04
TARDBP-228ENST00000629725 PCNTO95613 3336 aa27.81■■■□□ 2.04
TARDBP-228ENST00000629725 MYH14Q7Z406 1995 aaKnown RBP27.81■■■□□ 2.04
TARDBP-228ENST00000629725 TNNT2P45379 298 aaPredicted RBP27.81■■■□□ 2.04
TARDBP-228ENST00000629725 WDR90Q96KV7 1748 aa27.78■■■□□ 2.04
TARDBP-228ENST00000629725 KCNA3P22001 575 aa27.78■■■□□ 2.04
TARDBP-228ENST00000629725 CABP4P57796 275 aa27.77■■■□□ 2.04
TARDBP-228ENST00000629725 PLEKHO1Q53GL0 409 aaPredicted RBP27.77■■■□□ 2.04
TARDBP-228ENST00000629725 C9orf131Q5VYM1 1079 aa27.77■■■□□ 2.04
TARDBP-228ENST00000629725 C16orf71Q8IYS4 520 aaPredicted RBP27.76■■■□□ 2.03
TARDBP-228ENST00000629725 RBM46Q8TBY0 533 aaKnown RBP27.76■■■□□ 2.03
TARDBP-228ENST00000629725 PIM2Q9P1W9 311 aa27.76■■■□□ 2.03
TARDBP-228ENST00000629725 KDM6AO15550 1401 aaPredicted RBP27.75■■■□□ 2.03
TARDBP-228ENST00000629725 ZNF530Q6P9A1 599 aaPredicted RBP27.74■■■□□ 2.03
TARDBP-228ENST00000629725 PTCD1O75127 700 aaKnown RBP27.73■■■□□ 2.03
TARDBP-228ENST00000629725 AMOTQ4VCS5 1084 aa27.73■■■□□ 2.03
TARDBP-228ENST00000629725 POLR3GLQ9BT43 218 aa27.72■■■□□ 2.03
TARDBP-228ENST00000629725 CRKLP46109 303 aaKnown RBP27.71■■■□□ 2.03
TARDBP-228ENST00000629725 MTHFSP49914 203 aa27.71■■■□□ 2.03
TARDBP-228ENST00000629725 DALRD3Q5D0E6 543 aaKnown RBP27.71■■■□□ 2.03
TARDBP-228ENST00000629725 KDM2BQ8NHM5 1336 aa27.7■■■□□ 2.03
TARDBP-228ENST00000629725 SRP68Q9UHB9 627 aaKnown RBP27.7■■■□□ 2.02
TARDBP-228ENST00000629725 USP42Q9H9J4 1324 aaKnown RBP27.69■■■□□ 2.02
TARDBP-228ENST00000629725 KCPQ6ZWJ8 1503 aa27.69■■■□□ 2.02
TARDBP-228ENST00000629725 FSTL1Q12841 308 aa27.69■■■□□ 2.02
TARDBP-228ENST00000629725 FKBP8Q14318 412 aa27.69■■■□□ 2.02
TARDBP-228ENST00000629725 C1orf141Q5JVX7 400 aa27.69■■■□□ 2.02
TARDBP-228ENST00000629725 SBF1O95248 1867 aa27.68■■■□□ 2.02
TARDBP-228ENST00000629725 NFATC2IPQ8NCF5 419 aa27.68■■■□□ 2.02
TARDBP-228ENST00000629725 RNF181Q9P0P0 153 aa27.68■■■□□ 2.02
TARDBP-228ENST00000629725 HTRA3P83110 453 aa27.67■■■□□ 2.02
TARDBP-228ENST00000629725 DDR1Q08345 913 aa27.67■■■□□ 2.02
TARDBP-228ENST00000629725 KLRG1Q96E93 195 aa27.67■■■□□ 2.02
TARDBP-228ENST00000629725 TJP1Q07157 1748 aa27.67■■■□□ 2.02
TARDBP-228ENST00000629725 TNRC6CQ9HCJ0 1690 aaKnown RBP27.65■■■□□ 2.02
TARDBP-228ENST00000629725 CHRNA5P30532 468 aa27.64■■■□□ 2.02
TARDBP-228ENST00000629725 RRAGCQ9HB90 399 aa27.64■■■□□ 2.02
TARDBP-228ENST00000629725 AEBP1Q8IUX7 1158 aa27.63■■■□□ 2.01
TARDBP-228ENST00000629725 JMYQ8N9B5 988 aa27.62■■■□□ 2.01
TARDBP-228ENST00000629725 SCN11AQ9UI33 1791 aa27.62■■■□□ 2.01
TARDBP-228ENST00000629725 ADAMTS7Q9UKP4 1686 aa27.62■■■□□ 2.01
TARDBP-228ENST00000629725 POLRMTO00411 1230 aaKnown RBP27.61■■■□□ 2.01
TARDBP-228ENST00000629725 INTS5Q6P9B9 1019 aaKnown RBP27.61■■■□□ 2.01
TARDBP-228ENST00000629725 ZPR1O75312 459 aa27.6■■■□□ 2.01
TARDBP-228ENST00000629725 TM4SF1P30408 202 aa27.6■■■□□ 2.01
TARDBP-228ENST00000629725 TIMELESSQ9UNS1 1208 aa27.6■■■□□ 2.01
TARDBP-228ENST00000629725 SULT6B1Q6IMI4 303 aa27.59■■■□□ 2.01
TARDBP-228ENST00000629725 COL13A1Q5TAT6 717 aaPredicted RBP27.58■■■□□ 2.01
TARDBP-228ENST00000629725 PANK3Q9H999 370 aa27.58■■■□□ 2.01
TARDBP-228ENST00000629725 USPL1Q5W0Q7 1092 aa27.57■■■□□ 2
TARDBP-228ENST00000629725 AFDNP55196 1824 aaKnown RBP27.57■■■□□ 2
TARDBP-228ENST00000629725 SMC1BQ8NDV3 1235 aa27.56■■■□□ 2
TARDBP-228ENST00000629725 MORC1Q86VD1 984 aa27.55■■■□□ 2
TARDBP-228ENST00000629725 DNAJC10Q8IXB1 793 aa27.55■■■□□ 2
TARDBP-228ENST00000629725 ZC3H4Q9UPT8 1303 aaKnown RBP27.55■■■□□ 2
TARDBP-228ENST00000629725 RASSF7Q02833 373 aa27.54■■■□□ 2
TARDBP-228ENST00000629725 SOS1Q07889 1333 aaPredicted RBP27.53■■■□□ 2
TARDBP-228ENST00000629725 AKAP4Q5JQC9 854 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms