RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 SPATA31A7Q8IWB4 1347 aa7.61□□□□□ -1.19
LINC00550-202ENST00000629570 PER1O15534 1290 aaPredicted RBP7.61□□□□□ -1.19
LINC00550-202ENST00000629570 TNNT2P45379 298 aaPredicted RBP7.61□□□□□ -1.19
LINC00550-202ENST00000629570 AMER1Q5JTC6 1135 aaPredicted RBP7.61□□□□□ -1.19
LINC00550-202ENST00000629570 LARP1Q6PKG0 1096 aaKnown RBP7.61□□□□□ -1.19
LINC00550-202ENST00000629570 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
LINC00550-202ENST00000629570 KNSTRNQ9Y448 316 aa7.61□□□□□ -1.19
LINC00550-202ENST00000629570 CDK12Q9NYV4 1490 aaPredicted RBP7.61□□□□□ -1.19
LINC00550-202ENST00000629570 PEAK1Q9H792 1746 aa7.61□□□□□ -1.19
LINC00550-202ENST00000629570 ANKRD26Q9UPS8 1709 aa7.61□□□□□ -1.19
LINC00550-202ENST00000629570 NSD2O96028 1365 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 EVA1CP58658 441 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 USP35Q9P2H5 1018 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 EMILIN1Q9Y6C2 1016 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 RGPD5Q99666 1765 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 CRB1P82279 1406 aa7.6□□□□□ -1.19
LINC00550-202ENST00000629570 RTL1A6NKG5 1358 aa7.59□□□□□ -1.19
LINC00550-202ENST00000629570 SPATA31A1Q5TZJ5 1347 aa7.59□□□□□ -1.19
LINC00550-202ENST00000629570 WDR17Q8IZU2 1322 aa7.59□□□□□ -1.19
LINC00550-202ENST00000629570 HOXC9P31274 260 aa7.59□□□□□ -1.19
LINC00550-202ENST00000629570 CNGB1Q14028 1251 aaPredicted RBP7.59□□□□□ -1.19
LINC00550-202ENST00000629570 FAM98CQ17RN3 349 aaKnown RBP7.59□□□□□ -1.19
LINC00550-202ENST00000629570 CC2D1BQ5T0F9 858 aaKnown RBP7.59□□□□□ -1.19
LINC00550-202ENST00000629570 IP6K1Q92551 441 aa7.59□□□□□ -1.19
LINC00550-202ENST00000629570 BLMP54132 1417 aaPredicted RBP7.59□□□□□ -1.19
LINC00550-202ENST00000629570 THSD7AQ9UPZ6 1657 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 AMPHP49418 695 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 FOXK1P85037 733 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 TOM1L2Q6ZVM7 507 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 MORC1Q86VD1 984 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 PLPP6Q8IY26 295 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 ANKRD24Q8TF21 1146 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 PTCD2Q8WV60 388 aaKnown RBP7.58□□□□□ -1.2
LINC00550-202ENST00000629570 LTV1Q96GA3 475 aaPredicted RBP7.58□□□□□ -1.2
LINC00550-202ENST00000629570 FLT4P35916 1363 aa7.58□□□□□ -1.2
LINC00550-202ENST00000629570 A0A0G2JS52 829 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 PPM1GO15355 546 aaPredicted RBP7.57□□□□□ -1.2
LINC00550-202ENST00000629570 MYT1Q01538 1121 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 SEPT12Q8IYM1 358 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 TCP11L2Q8N4U5 519 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 POLKQ9UBT6 870 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 EP400Q96L91 3159 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 SMG6Q86US8 1419 aaKnown RBP7.57□□□□□ -1.2
LINC00550-202ENST00000629570 NPC1L1Q9UHC9 1359 aa7.57□□□□□ -1.2
LINC00550-202ENST00000629570 PSDA5PKW4 1024 aaPredicted RBP7.56□□□□□ -1.2
LINC00550-202ENST00000629570 ARHGAP33O14559 1287 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
LINC00550-202ENST00000629570 DDX10Q13206 875 aaKnown RBP7.56□□□□□ -1.2
LINC00550-202ENST00000629570 DSG2Q14126 1118 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 GPHNQ9NQX3 736 aaPredicted RBP7.56□□□□□ -1.2
LINC00550-202ENST00000629570 NLRP2Q9NX02 1062 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 INSRP06213 1382 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 KIF24Q5T7B8 1368 aa7.56□□□□□ -1.2
LINC00550-202ENST00000629570 DISP2A7MBM2 1401 aa7.55□□□□□ -1.2
LINC00550-202ENST00000629570 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
LINC00550-202ENST00000629570 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
LINC00550-202ENST00000629570 LRRC37A3O60309 1634 aa7.55□□□□□ -1.2
LINC00550-202ENST00000629570 MAP2P11137 1827 aaKnown RBP7.55□□□□□ -1.2
LINC00550-202ENST00000629570 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
LINC00550-202ENST00000629570 WNK3Q9BYP7 1800 aa7.55□□□□□ -1.2
LINC00550-202ENST00000629570 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
LINC00550-202ENST00000629570 SOCS7O14512 581 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 FAM182BQ5T319 152 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 NBPF6Q5VWK0 638 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 NBPF4Q96M43 638 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 RGPD2P0DJD1 1756 aa7.54□□□□□ -1.2
LINC00550-202ENST00000629570 MEGF6O75095 1541 aa7.53□□□□□ -1.2
LINC00550-202ENST00000629570 PARP4Q9UKK3 1724 aaKnown RBP7.53□□□□□ -1.2
LINC00550-202ENST00000629570 MTHFSP49914 203 aa7.53□□□□□ -1.2
LINC00550-202ENST00000629570 EIF4A2Q14240 407 aaKnown RBP7.53□□□□□ -1.2
LINC00550-202ENST00000629570 DMRTA1Q5VZB9 504 aa7.53□□□□□ -1.2
LINC00550-202ENST00000629570 KRT27Q7Z3Y8 459 aa7.53□□□□□ -1.2
LINC00550-202ENST00000629570 TNS2Q63HR2 1409 aa7.52□□□□□ -1.2
LINC00550-202ENST00000629570 PARD3Q8TEW0 1356 aa7.52□□□□□ -1.21
LINC00550-202ENST00000629570 PSEN2P49810 448 aa7.52□□□□□ -1.21
LINC00550-202ENST00000629570 NKX1-1Q15270 411 aaPredicted RBP7.52□□□□□ -1.21
LINC00550-202ENST00000629570 NCAPD2Q15021 1401 aa7.52□□□□□ -1.21
LINC00550-202ENST00000629570 COL3A1P02461 1466 aaPredicted RBP7.51□□□□□ -1.21
LINC00550-202ENST00000629570 TK2O00142 265 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 IL2RBP14784 551 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 DDB1Q16531 1140 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 PPP4R3BQ5MIZ7 849 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 EYA1Q99502 592 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
LINC00550-202ENST00000629570 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
LINC00550-202ENST00000629570 HRO43593 1189 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 TBC1D12O60347 775 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 PPP2R1AP30153 589 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 IL13P35225 146 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 PDE3BQ13370 1112 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 UPF1Q92900 1129 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC00550-202ENST00000629570 IGSF1Q8N6C5 1336 aa7.5□□□□□ -1.21
LINC00550-202ENST00000629570 RGPD1P0DJD0 1748 aa7.49□□□□□ -1.21
LINC00550-202ENST00000629570 MARCH10Q8NA82 808 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms