RNA–Protein interactions for RNA: ENST00000629252.2

UBE3A-218, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 1,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-218ENST00000629252 ATG3Q9NT62 314 aa28.04■■■□□ 2.08
UBE3A-218ENST00000629252 RBM42Q9BTD8 480 aaKnown RBP28.03■■■□□ 2.08
UBE3A-218ENST00000629252 GPBP1L1Q9HC44 474 aaPredicted RBP28.01■■■□□ 2.07
UBE3A-218ENST00000629252 PANK3Q9H999 370 aa28■■■□□ 2.07
UBE3A-218ENST00000629252 MMP10P09238 476 aa27.99■■■□□ 2.07
UBE3A-218ENST00000629252 HSPA5P11021 654 aaKnown RBP27.98■■■□□ 2.07
UBE3A-218ENST00000629252 EIF4G2P78344 907 aaKnown RBP eCLIP27.98■■■□□ 2.07
UBE3A-218ENST00000629252 ZNF530Q6P9A1 599 aaPredicted RBP27.98■■■□□ 2.07
UBE3A-218ENST00000629252 RTCBQ9Y3I0 505 aaKnown RBP27.97■■■□□ 2.07
UBE3A-218ENST00000629252 CLSPNQ9HAW4 1339 aa27.96■■■□□ 2.07
UBE3A-218ENST00000629252 PLEKHO1Q53GL0 409 aaPredicted RBP27.96■■■□□ 2.07
UBE3A-218ENST00000629252 KDRP35968 1356 aa27.96■■■□□ 2.07
UBE3A-218ENST00000629252 HSP90AB1P08238 724 aaKnown RBP27.95■■■□□ 2.06
UBE3A-218ENST00000629252 TRAPPC3LQ5T215 181 aa27.95■■■□□ 2.06
UBE3A-218ENST00000629252 DCAF5Q96JK2 942 aa27.95■■■□□ 2.06
UBE3A-218ENST00000629252 ERVV-2B6SEH9 535 aa27.94■■■□□ 2.06
UBE3A-218ENST00000629252 CABP4P57796 275 aa27.94■■■□□ 2.06
UBE3A-218ENST00000629252 CICQ96RK0 1608 aaPredicted RBP27.93■■■□□ 2.06
UBE3A-218ENST00000629252 MORC1Q86VD1 984 aa27.93■■■□□ 2.06
UBE3A-218ENST00000629252 SLC4A9Q96Q91 983 aa27.93■■■□□ 2.06
UBE3A-218ENST00000629252 ADCY9O60503 1353 aa27.93■■■□□ 2.06
UBE3A-218ENST00000629252 AEBP1Q8IUX7 1158 aa27.92■■■□□ 2.06
UBE3A-218ENST00000629252 KDM6AO15550 1401 aaPredicted RBP27.92■■■□□ 2.06
UBE3A-218ENST00000629252 C1orf141Q5JVX7 400 aa27.91■■■□□ 2.06
UBE3A-218ENST00000629252 PLEKHG2Q9H7P9 1386 aa27.9■■■□□ 2.06
UBE3A-218ENST00000629252 N4BP2Q86UW6 1770 aaPredicted RBP27.9■■■□□ 2.06
UBE3A-218ENST00000629252 COL5A3P25940 1745 aaPredicted RBP27.89■■■□□ 2.06
UBE3A-218ENST00000629252 PTCD1O75127 700 aaKnown RBP27.89■■■□□ 2.06
UBE3A-218ENST00000629252 RFC4P35249 363 aa27.89■■■□□ 2.06
UBE3A-218ENST00000629252 MTHFSP49914 203 aa27.89■■■□□ 2.06
UBE3A-218ENST00000629252 AMOTQ4VCS5 1084 aa27.89■■■□□ 2.06
UBE3A-218ENST00000629252 ARHGEF1Q92888 912 aaKnown RBP27.89■■■□□ 2.06
UBE3A-218ENST00000629252 PXDNLA1KZ92 1463 aa27.89■■■□□ 2.05
UBE3A-218ENST00000629252 NLGN1Q8N2Q7 840 aa27.88■■■□□ 2.05
UBE3A-218ENST00000629252 BCS1LQ9Y276 419 aa27.88■■■□□ 2.05
UBE3A-218ENST00000629252 ZNF831Q5JPB2 1677 aa27.87■■■□□ 2.05
UBE3A-218ENST00000629252 CNTNAP4Q9C0A0 1308 aa27.87■■■□□ 2.05
UBE3A-218ENST00000629252 A0A0G2JLW4 131 aa27.86■■■□□ 2.05
UBE3A-218ENST00000629252 SULT6B1Q6IMI4 303 aa27.86■■■□□ 2.05
UBE3A-218ENST00000629252 ADRA2BP18089 450 aa27.85■■■□□ 2.05
UBE3A-218ENST00000629252 RC3H1Q5TC82 1133 aaKnown RBP27.85■■■□□ 2.05
UBE3A-218ENST00000629252 KIF13BQ9NQT8 1826 aa27.85■■■□□ 2.05
UBE3A-218ENST00000629252 CCDC87Q9NVE4 849 aa27.84■■■□□ 2.05
UBE3A-218ENST00000629252 KNSTRNQ9Y448 316 aa27.84■■■□□ 2.05
UBE3A-218ENST00000629252 PARP3Q9Y6F1 533 aa27.84■■■□□ 2.05
UBE3A-218ENST00000629252 C4AP0C0L4 1744 aa27.84■■■□□ 2.05
UBE3A-218ENST00000629252 C10orf71Q711Q0 1435 aa27.84■■■□□ 2.05
UBE3A-218ENST00000629252 RPS6KA4O75676 772 aa27.83■■■□□ 2.05
UBE3A-218ENST00000629252 GYS1P13807 737 aa27.83■■■□□ 2.05
UBE3A-218ENST00000629252 NFATC2IPQ8NCF5 419 aa27.83■■■□□ 2.05
UBE3A-218ENST00000629252 KIAA1551Q9HCM1 1747 aa27.83■■■□□ 2.05
UBE3A-218ENST00000629252 CEP350Q5VT06 3117 aa27.82■■■□□ 2.04
UBE3A-218ENST00000629252 CCER1Q8TC90 406 aaPredicted RBP27.82■■■□□ 2.04
UBE3A-218ENST00000629252 MYH14Q7Z406 1995 aaKnown RBP27.82■■■□□ 2.04
UBE3A-218ENST00000629252 TGFB2P61812 414 aa27.81■■■□□ 2.04
UBE3A-218ENST00000629252 DPEP1P16444 411 aa27.8■■■□□ 2.04
UBE3A-218ENST00000629252 CRKLP46109 303 aaKnown RBP27.8■■■□□ 2.04
UBE3A-218ENST00000629252 ARHGAP27Q6ZUM4 889 aa27.8■■■□□ 2.04
UBE3A-218ENST00000629252 SRP68Q9UHB9 627 aaKnown RBP27.79■■■□□ 2.04
UBE3A-218ENST00000629252 FCHSD2O94868 740 aa27.78■■■□□ 2.04
UBE3A-218ENST00000629252 HSPA6P17066 643 aa27.78■■■□□ 2.04
UBE3A-218ENST00000629252 TJP1Q07157 1748 aa27.77■■■□□ 2.04
UBE3A-218ENST00000629252 IL13P35225 146 aa27.76■■■□□ 2.03
UBE3A-218ENST00000629252 SCN11AQ9UI33 1791 aa27.76■■■□□ 2.03
UBE3A-218ENST00000629252 KIF3CO14782 793 aa27.74■■■□□ 2.03
UBE3A-218ENST00000629252 FKBP8Q14318 412 aa27.73■■■□□ 2.03
UBE3A-218ENST00000629252 USP42Q9H9J4 1324 aaKnown RBP27.72■■■□□ 2.03
UBE3A-218ENST00000629252 HMOX1P09601 288 aa27.72■■■□□ 2.03
UBE3A-218ENST00000629252 BRCA1P38398 1863 aaKnown RBP27.71■■■□□ 2.03
UBE3A-218ENST00000629252 AKAP4Q5JQC9 854 aa27.71■■■□□ 2.03
UBE3A-218ENST00000629252 DNAJC10Q8IXB1 793 aa27.7■■■□□ 2.02
UBE3A-218ENST00000629252 DDR1Q08345 913 aa27.69■■■□□ 2.02
UBE3A-218ENST00000629252 LGR6Q9HBX8 967 aa27.69■■■□□ 2.02
UBE3A-218ENST00000629252 SLC39A6Q13433 755 aa27.68■■■□□ 2.02
UBE3A-218ENST00000629252 AMER1Q5JTC6 1135 aaPredicted RBP27.68■■■□□ 2.02
UBE3A-218ENST00000629252 SLC52A2Q9HAB3 445 aa27.68■■■□□ 2.02
UBE3A-218ENST00000629252 PIM2Q9P1W9 311 aa27.68■■■□□ 2.02
UBE3A-218ENST00000629252 ZPR1O75312 459 aa27.67■■■□□ 2.02
UBE3A-218ENST00000629252 CNGB1Q14028 1251 aaPredicted RBP27.67■■■□□ 2.02
UBE3A-218ENST00000629252 INTS5Q6P9B9 1019 aaKnown RBP27.67■■■□□ 2.02
UBE3A-218ENST00000629252 KCNA3P22001 575 aa27.66■■■□□ 2.02
UBE3A-218ENST00000629252 CHRNA5P30532 468 aa27.66■■■□□ 2.02
UBE3A-218ENST00000629252 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
UBE3A-218ENST00000629252 NMRK2Q9NPI5 230 aa27.66■■■□□ 2.02
UBE3A-218ENST00000629252 VIRMAQ69YN4 1812 aaKnown RBP27.66■■■□□ 2.02
UBE3A-218ENST00000629252 KIF7Q2M1P5 1343 aa27.66■■■□□ 2.02
UBE3A-218ENST00000629252 ARFGEF1Q9Y6D6 1849 aa27.65■■■□□ 2.02
UBE3A-218ENST00000629252 DALRD3Q5D0E6 543 aaKnown RBP27.65■■■□□ 2.02
UBE3A-218ENST00000629252 CC2D1BQ5T0F9 858 aaKnown RBP27.65■■■□□ 2.02
UBE3A-218ENST00000629252 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
UBE3A-218ENST00000629252 RNMTO43148 476 aaKnown RBP27.64■■■□□ 2.02
UBE3A-218ENST00000629252 POLRMTO00411 1230 aaKnown RBP27.62■■■□□ 2.01
UBE3A-218ENST00000629252 IFFO2Q5TF58 517 aa27.61■■■□□ 2.01
UBE3A-218ENST00000629252 MRC1P22897 1456 aa27.61■■■□□ 2.01
UBE3A-218ENST00000629252 ADAMTS7Q9UKP4 1686 aa27.61■■■□□ 2.01
UBE3A-218ENST00000629252 SOS1Q07889 1333 aaPredicted RBP27.61■■■□□ 2.01
UBE3A-218ENST00000629252 DIAPH1O60610 1272 aaKnown RBP27.6■■■□□ 2.01
UBE3A-218ENST00000629252 TOMM70O94826 608 aa27.6■■■□□ 2.01
UBE3A-218ENST00000629252 MTHFSDQ2M296 383 aaKnown RBP27.6■■■□□ 2.01
UBE3A-218ENST00000629252 RNF181Q9P0P0 153 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms