RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 DOT1LQ8TEK3 1739 aa22.98■■□□□ 1.27
SPTAN1-217ENST00000629089 SYTL4Q96C24 671 aaPredicted RBP22.98■■□□□ 1.27
SPTAN1-217ENST00000629089 MRC1P22897 1456 aa22.97■■□□□ 1.27
SPTAN1-217ENST00000629089 ACSBG1Q96GR2 724 aa22.97■■□□□ 1.27
SPTAN1-217ENST00000629089 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
SPTAN1-217ENST00000629089 TSPYL4Q9UJ04 414 aa22.97■■□□□ 1.27
SPTAN1-217ENST00000629089 SIPA1L3O60292 1781 aaPredicted RBP22.97■■□□□ 1.27
SPTAN1-217ENST00000629089 KAT6BQ8WYB5 2073 aa22.96■■□□□ 1.27
SPTAN1-217ENST00000629089 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
SPTAN1-217ENST00000629089 ZNF853P0CG23 659 aa22.96■■□□□ 1.27
SPTAN1-217ENST00000629089 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
SPTAN1-217ENST00000629089 TSR2Q969E8 191 aaKnown RBP22.95■■□□□ 1.26
SPTAN1-217ENST00000629089 ITGB4P16144 1822 aa22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 CHL1O00533 1208 aa22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 PRIM1P49642 420 aaKnown RBP22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 MBIPQ9NS73 344 aa22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 BABAM1Q9NWV8 329 aa22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 FANCIQ9NVI1 1328 aa22.94■■□□□ 1.26
SPTAN1-217ENST00000629089 DUSP27Q5VZP5 1158 aa22.92■■□□□ 1.26
SPTAN1-217ENST00000629089 FAM196AQ6ZSG2 479 aa22.92■■□□□ 1.26
SPTAN1-217ENST00000629089 BCL9O00512 1426 aa22.92■■□□□ 1.26
SPTAN1-217ENST00000629089 TRMT2AQ8IZ69 625 aaKnown RBP22.92■■□□□ 1.26
SPTAN1-217ENST00000629089 PIGBQ92521 554 aa22.91■■□□□ 1.26
SPTAN1-217ENST00000629089 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.26
SPTAN1-217ENST00000629089 KCNQ2O43526 872 aa22.89■■□□□ 1.26
SPTAN1-217ENST00000629089 SLC39A6Q13433 755 aa22.89■■□□□ 1.26
SPTAN1-217ENST00000629089 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.26
SPTAN1-217ENST00000629089 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
SPTAN1-217ENST00000629089 SBF2Q86WG5 1849 aa22.87■■□□□ 1.25
SPTAN1-217ENST00000629089 NHSQ6T4R5 1651 aa22.87■■□□□ 1.25
SPTAN1-217ENST00000629089 KCNQ3O43525 872 aa22.87■■□□□ 1.25
SPTAN1-217ENST00000629089 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
SPTAN1-217ENST00000629089 EXOSC9Q06265 439 aaKnown RBP22.86■■□□□ 1.25
SPTAN1-217ENST00000629089 PAPPAQ13219 1627 aa22.85■■□□□ 1.25
SPTAN1-217ENST00000629089 ASAP1Q9ULH1 1129 aa22.84■■□□□ 1.25
SPTAN1-217ENST00000629089 EIF4A1P60842 406 aaKnown RBP22.83■■□□□ 1.25
SPTAN1-217ENST00000629089 ATG3Q9NT62 314 aa22.83■■□□□ 1.25
SPTAN1-217ENST00000629089 ELL2O00472 640 aaPredicted RBP22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 TRIM37O94972 964 aa22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 KRT24Q2M2I5 525 aa22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 BCL11BQ9C0K0 894 aaPredicted RBP22.82■■□□□ 1.24
SPTAN1-217ENST00000629089 BTAF1O14981 1849 aa22.81■■□□□ 1.24
SPTAN1-217ENST00000629089 PTCD1O75127 700 aaKnown RBP22.81■■□□□ 1.24
SPTAN1-217ENST00000629089 C8orf58Q8NAV2 365 aa22.81■■□□□ 1.24
SPTAN1-217ENST00000629089 TWISTNBQ3B726 338 aaPredicted RBP22.8■■□□□ 1.24
SPTAN1-217ENST00000629089 TSPYL6Q8N831 410 aa22.8■■□□□ 1.24
SPTAN1-217ENST00000629089 SMARCC1Q92922 1105 aaPredicted RBP22.8■■□□□ 1.24
SPTAN1-217ENST00000629089 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
SPTAN1-217ENST00000629089 UBR2Q8IWV8 1755 aa22.8■■□□□ 1.24
SPTAN1-217ENST00000629089 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
SPTAN1-217ENST00000629089 KCPQ6ZWJ8 1503 aa22.79■■□□□ 1.24
SPTAN1-217ENST00000629089 PALLDQ8WX93 1383 aa22.78■■□□□ 1.24
SPTAN1-217ENST00000629089 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.24
SPTAN1-217ENST00000629089 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
SPTAN1-217ENST00000629089 GIGYF1O75420 1035 aaPredicted RBP22.76■■□□□ 1.23
SPTAN1-217ENST00000629089 VAMP4O75379 141 aa22.75■■□□□ 1.23
SPTAN1-217ENST00000629089 SNRPA1P09661 255 aaKnown RBP22.75■■□□□ 1.23
SPTAN1-217ENST00000629089 SOS1Q07889 1333 aaPredicted RBP22.74■■□□□ 1.23
SPTAN1-217ENST00000629089 HOXB7P09629 217 aa22.74■■□□□ 1.23
SPTAN1-217ENST00000629089 PRAMEF22A3QJZ6 481 aa22.73■■□□□ 1.23
SPTAN1-217ENST00000629089 VSIG10Q8N0Z9 540 aa22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 C5P01031 1676 aa22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 EIF2S2P20042 333 aaKnown RBP22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 SIK1P57059 783 aa22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 RCAN3Q9UKA8 241 aa22.72■■□□□ 1.23
SPTAN1-217ENST00000629089 EP400Q96L91 3159 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 APBA3O96018 575 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 ATP6V1AP38606 617 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 HDGFL1Q5TGJ6 251 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 NECTIN2Q92692 538 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 ZNF428Q96B54 188 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 CHMP4AQ9BY43 222 aa22.71■■□□□ 1.23
SPTAN1-217ENST00000629089 CCDC30Q5VVM6 783 aa22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 SLC4A9Q96Q91 983 aa22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 TEX13AQ9BXU3 409 aaPredicted RBP22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 LAMB4A4D0S4 1761 aa22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 TNS1Q9HBL0 1735 aaKnown RBP22.69■■□□□ 1.22
SPTAN1-217ENST00000629089 RARSP54136 660 aaKnown RBP22.68■■□□□ 1.22
SPTAN1-217ENST00000629089 DNAJC10Q8IXB1 793 aa22.68■■□□□ 1.22
SPTAN1-217ENST00000629089 LY75O60449 1722 aa22.68■■□□□ 1.22
SPTAN1-217ENST00000629089 TCERG1O14776 1098 aaKnown RBP22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 SF3B2Q13435 895 aaKnown RBP22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 BCL2L13Q9BXK5 485 aa22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 ALDH1L2Q3SY69 923 aa22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 STK31Q9BXU1 1019 aa22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 SMC4Q9NTJ3 1288 aa22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
SPTAN1-217ENST00000629089 TJP1Q07157 1748 aa22.66■■□□□ 1.22
SPTAN1-217ENST00000629089 STARD3NLO95772 234 aa22.66■■□□□ 1.22
SPTAN1-217ENST00000629089 SSH1Q8WYL5 1049 aa22.66■■□□□ 1.22
SPTAN1-217ENST00000629089 ZNF831Q5JPB2 1677 aa22.65■■□□□ 1.22
SPTAN1-217ENST00000629089 PLSCR1O15162 318 aa22.65■■□□□ 1.22
SPTAN1-217ENST00000629089 KCNQ4P56696 695 aa22.64■■□□□ 1.21
SPTAN1-217ENST00000629089 BCAR3O75815 825 aa22.63■■□□□ 1.21
SPTAN1-217ENST00000629089 ITPK1Q13572 414 aa22.63■■□□□ 1.21
SPTAN1-217ENST00000629089 CHPF2Q9P2E5 772 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms