RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 PHF14O94880 888 aa9.1□□□□□ -0.95
LINC00649-220ENST00000628906 AK7Q96M32 723 aa9.1□□□□□ -0.95
LINC00649-220ENST00000628906 NLRP2Q9NX02 1062 aa9.1□□□□□ -0.95
LINC00649-220ENST00000628906 ZNF219Q9P2Y4 722 aaPredicted RBP9.1□□□□□ -0.95
LINC00649-220ENST00000628906 NSD3Q9BZ95 1437 aa9.1□□□□□ -0.95
LINC00649-220ENST00000628906 C5P01031 1676 aa9.1□□□□□ -0.95
LINC00649-220ENST00000628906 CA12O43570 354 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 APLP2Q06481 763 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 CCDC87Q9NVE4 849 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 TSKSQ9UJT2 592 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 COL6A3P12111 3177 aa9.09□□□□□ -0.95
LINC00649-220ENST00000628906 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
LINC00649-220ENST00000628906 TAF1LQ8IZX4 1826 aa9.08□□□□□ -0.96
LINC00649-220ENST00000628906 RASSF7Q02833 373 aa9.08□□□□□ -0.96
LINC00649-220ENST00000628906 LDHDQ86WU2 507 aa9.08□□□□□ -0.96
LINC00649-220ENST00000628906 GPR101Q96P66 508 aaPredicted RBP9.08□□□□□ -0.96
LINC00649-220ENST00000628906 UBR3Q6ZT12 1888 aa9.08□□□□□ -0.96
LINC00649-220ENST00000628906 ADGRB1O14514 1584 aa9.07□□□□□ -0.96
LINC00649-220ENST00000628906 MAP2K2P36507 400 aa9.07□□□□□ -0.96
LINC00649-220ENST00000628906 C4BP0C0L5 1744 aa9.06□□□□□ -0.96
LINC00649-220ENST00000628906 ECE1P42892 770 aa9.06□□□□□ -0.96
LINC00649-220ENST00000628906 TMF1P82094 1093 aa9.06□□□□□ -0.96
LINC00649-220ENST00000628906 CAPNS2Q96L46 248 aa9.06□□□□□ -0.96
LINC00649-220ENST00000628906 THSD7BQ9C0I4 1608 aa9.05□□□□□ -0.96
LINC00649-220ENST00000628906 MKI67P46013 3256 aaKnown RBP9.04□□□□□ -0.96
LINC00649-220ENST00000628906 ADAMTS7Q9UKP4 1686 aa9.04□□□□□ -0.96
LINC00649-220ENST00000628906 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
LINC00649-220ENST00000628906 LTBP1Q14766 1721 aa9.03□□□□□ -0.96
LINC00649-220ENST00000628906 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
LINC00649-220ENST00000628906 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
LINC00649-220ENST00000628906 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
LINC00649-220ENST00000628906 ABT1Q9ULW3 272 aaKnown RBP9.03□□□□□ -0.96
LINC00649-220ENST00000628906 PARP3Q9Y6F1 533 aa9.03□□□□□ -0.96
LINC00649-220ENST00000628906 IQCA1LA6NCM1 817 aa9.02□□□□□ -0.97
LINC00649-220ENST00000628906 CHRNA5P30532 468 aa9.02□□□□□ -0.97
LINC00649-220ENST00000628906 CYP4F22Q6NT55 531 aa9.02□□□□□ -0.97
LINC00649-220ENST00000628906 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
LINC00649-220ENST00000628906 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.97
LINC00649-220ENST00000628906 RNF39Q9H2S5 420 aa9.02□□□□□ -0.97
LINC00649-220ENST00000628906 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-220ENST00000628906 U3KPZ7 1027 aaPredicted RBP9.02□□□□□ -0.97
LINC00649-220ENST00000628906 TRIOBPQ9H2D6 2365 aa9.01□□□□□ -0.97
LINC00649-220ENST00000628906 NFKBIEO00221 500 aa9.01□□□□□ -0.97
LINC00649-220ENST00000628906 SOX12O15370 315 aa9.01□□□□□ -0.97
LINC00649-220ENST00000628906 DDNO94850 711 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-220ENST00000628906 CNTROBQ8N137 903 aa9.01□□□□□ -0.97
LINC00649-220ENST00000628906 SMARCC1Q92922 1105 aaPredicted RBP9.01□□□□□ -0.97
LINC00649-220ENST00000628906 NFAT5O94916 1531 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 CCDC88AQ3V6T2 1871 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 GNPATO15228 680 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 GYS1P13807 737 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 ITGAEP38570 1179 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
LINC00649-220ENST00000628906 LINC00116Q8NCU8 138 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
LINC00649-220ENST00000628906 C4AP0C0L4 1744 aa9□□□□□ -0.97
LINC00649-220ENST00000628906 AOC2O75106 756 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 NBPF1Q3BBV0 1214 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 TRAPPC3LQ5T215 181 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 DDX21Q9NR30 783 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC00649-220ENST00000628906 CABP1Q9NZU7 370 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 TIAM2Q8IVF5 1701 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 MEGF6O75095 1541 aa8.99□□□□□ -0.97
LINC00649-220ENST00000628906 TTC21BQ7Z4L5 1316 aa8.98□□□□□ -0.97
LINC00649-220ENST00000628906 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
LINC00649-220ENST00000628906 SIK1P57059 783 aa8.97□□□□□ -0.97
LINC00649-220ENST00000628906 GRM1Q13255 1194 aa8.97□□□□□ -0.97
LINC00649-220ENST00000628906 MPRIPQ6WCQ1 1025 aa8.97□□□□□ -0.97
LINC00649-220ENST00000628906 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
LINC00649-220ENST00000628906 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
LINC00649-220ENST00000628906 CLEC11AQ9Y240 323 aa8.97□□□□□ -0.97
LINC00649-220ENST00000628906 SCN4AP35499 1836 aa8.96□□□□□ -0.97
LINC00649-220ENST00000628906 MAP1SQ66K74 1059 aaPredicted RBP8.96□□□□□ -0.98
LINC00649-220ENST00000628906 COLQQ9Y215 455 aaPredicted RBP8.96□□□□□ -0.98
LINC00649-220ENST00000628906 RTCBQ9Y3I0 505 aaKnown RBP8.96□□□□□ -0.98
LINC00649-220ENST00000628906 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.98
LINC00649-220ENST00000628906 CEP290O15078 2479 aa8.96□□□□□ -0.98
LINC00649-220ENST00000628906 RANBP2P49792 3224 aaKnown RBP8.95□□□□□ -0.98
LINC00649-220ENST00000628906 ITPK1Q13572 414 aa8.95□□□□□ -0.98
LINC00649-220ENST00000628906 EAPPQ56P03 285 aaPredicted RBP8.95□□□□□ -0.98
LINC00649-220ENST00000628906 CST9Q5W186 159 aa8.95□□□□□ -0.98
LINC00649-220ENST00000628906 PNMA8AQ86V59 439 aaPredicted RBP8.95□□□□□ -0.98
LINC00649-220ENST00000628906 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
LINC00649-220ENST00000628906 ZNF692Q9BU19 519 aaPredicted RBP8.95□□□□□ -0.98
LINC00649-220ENST00000628906 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
LINC00649-220ENST00000628906 TTC21AQ8NDW8 1320 aa8.95□□□□□ -0.98
LINC00649-220ENST00000628906 DICER1Q9UPY3 1922 aaKnown RBP8.95□□□□□ -0.98
LINC00649-220ENST00000628906 ADAMTSL1Q8N6G6 1762 aa8.94□□□□□ -0.98
LINC00649-220ENST00000628906 MAP2P11137 1827 aaKnown RBP8.94□□□□□ -0.98
LINC00649-220ENST00000628906 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
LINC00649-220ENST00000628906 CIAPIN1Q6FI81 312 aa8.94□□□□□ -0.98
LINC00649-220ENST00000628906 HHIPL1Q96JK4 782 aa8.94□□□□□ -0.98
LINC00649-220ENST00000628906 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
LINC00649-220ENST00000628906 UNC80Q8N2C7 3258 aa8.94□□□□□ -0.98
LINC00649-220ENST00000628906 EPHX2P34913 555 aa8.93□□□□□ -0.98
LINC00649-220ENST00000628906 RFC4P35249 363 aa8.93□□□□□ -0.98
LINC00649-220ENST00000628906 DDR1Q08345 913 aa8.93□□□□□ -0.98
LINC00649-220ENST00000628906 CTU1Q7Z7A3 348 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms