RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
TRIM29-221ENST00000627238 ATP6V1AP38606 617 aa22.7■■□□□ 1.22
TRIM29-221ENST00000627238 ATP10DQ9P241 1426 aa22.7■■□□□ 1.22
TRIM29-221ENST00000627238 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
TRIM29-221ENST00000627238 GNPATO15228 680 aa22.69■■□□□ 1.22
TRIM29-221ENST00000627238 HSP90AB1P08238 724 aaKnown RBP22.69■■□□□ 1.22
TRIM29-221ENST00000627238 EIF4G2P78344 907 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM29-221ENST00000627238 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
TRIM29-221ENST00000627238 DCAF5Q96JK2 942 aa22.69■■□□□ 1.22
TRIM29-221ENST00000627238 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
TRIM29-221ENST00000627238 KDM6AO15550 1401 aaPredicted RBP22.66■■□□□ 1.22
TRIM29-221ENST00000627238 KIAA1551Q9HCM1 1747 aa22.66■■□□□ 1.22
TRIM29-221ENST00000627238 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
TRIM29-221ENST00000627238 AMOTQ4VCS5 1084 aa22.66■■□□□ 1.22
TRIM29-221ENST00000627238 SLC4A9Q96Q91 983 aa22.66■■□□□ 1.22
TRIM29-221ENST00000627238 PANK3Q9H999 370 aa22.66■■□□□ 1.22
TRIM29-221ENST00000627238 CNTNAP4Q9C0A0 1308 aa22.65■■□□□ 1.22
TRIM29-221ENST00000627238 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
TRIM29-221ENST00000627238 ADRA2BP18089 450 aa22.65■■□□□ 1.22
TRIM29-221ENST00000627238 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
TRIM29-221ENST00000627238 POLR3GLQ9BT43 218 aa22.63■■□□□ 1.21
TRIM29-221ENST00000627238 RTCBQ9Y3I0 505 aaKnown RBP22.63■■□□□ 1.21
TRIM29-221ENST00000627238 TRAPPC3LQ5T215 181 aa22.62■■□□□ 1.21
TRIM29-221ENST00000627238 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
TRIM29-221ENST00000627238 PXDNLA1KZ92 1463 aa22.61■■□□□ 1.21
TRIM29-221ENST00000627238 MMP10P09238 476 aa22.61■■□□□ 1.21
TRIM29-221ENST00000627238 C10orf71Q711Q0 1435 aa22.61■■□□□ 1.21
TRIM29-221ENST00000627238 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
TRIM29-221ENST00000627238 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
TRIM29-221ENST00000627238 TGFB2P61812 414 aa22.6■■□□□ 1.21
TRIM29-221ENST00000627238 ZNF530Q6P9A1 599 aaPredicted RBP22.6■■□□□ 1.21
TRIM29-221ENST00000627238 PCGF6Q9BYE7 350 aa22.6■■□□□ 1.21
TRIM29-221ENST00000627238 GPBP1L1Q9HC44 474 aaPredicted RBP22.6■■□□□ 1.21
TRIM29-221ENST00000627238 RPS6KA4O75676 772 aa22.59■■□□□ 1.21
TRIM29-221ENST00000627238 MORC1Q86VD1 984 aa22.58■■□□□ 1.21
TRIM29-221ENST00000627238 ARHGEF1Q92888 912 aaKnown RBP22.58■■□□□ 1.21
TRIM29-221ENST00000627238 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.21
TRIM29-221ENST00000627238 SCN11AQ9UI33 1791 aa22.58■■□□□ 1.2
TRIM29-221ENST00000627238 GYS1P13807 737 aa22.57■■□□□ 1.2
TRIM29-221ENST00000627238 CABP4P57796 275 aa22.57■■□□□ 1.2
TRIM29-221ENST00000627238 BRCA1P38398 1863 aaKnown RBP22.57■■□□□ 1.2
TRIM29-221ENST00000627238 MTHFSP49914 203 aa22.56■■□□□ 1.2
TRIM29-221ENST00000627238 AEBP1Q8IUX7 1158 aa22.56■■□□□ 1.2
TRIM29-221ENST00000627238 TJP1Q07157 1748 aa22.56■■□□□ 1.2
TRIM29-221ENST00000627238 N4BP2Q86UW6 1770 aaPredicted RBP22.55■■□□□ 1.2
TRIM29-221ENST00000627238 IL13P35225 146 aa22.55■■□□□ 1.2
TRIM29-221ENST00000627238 C1orf141Q5JVX7 400 aa22.55■■□□□ 1.2
TRIM29-221ENST00000627238 RFC4P35249 363 aa22.53■■□□□ 1.2
TRIM29-221ENST00000627238 AMER1Q5JTC6 1135 aaPredicted RBP22.53■■□□□ 1.2
TRIM29-221ENST00000627238 SULT6B1Q6IMI4 303 aa22.53■■□□□ 1.2
TRIM29-221ENST00000627238 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
TRIM29-221ENST00000627238 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
TRIM29-221ENST00000627238 NFATC2IPQ8NCF5 419 aa22.52■■□□□ 1.2
TRIM29-221ENST00000627238 CCDC87Q9NVE4 849 aa22.52■■□□□ 1.2
TRIM29-221ENST00000627238 MRC1P22897 1456 aa22.52■■□□□ 1.2
TRIM29-221ENST00000627238 ARFGEF1Q9Y6D6 1849 aa22.51■■□□□ 1.19
TRIM29-221ENST00000627238 CRKLP46109 303 aaKnown RBP22.5■■□□□ 1.19
TRIM29-221ENST00000627238 WWC3Q9ULE0 1092 aa22.5■■□□□ 1.19
TRIM29-221ENST00000627238 AKAP4Q5JQC9 854 aa22.49■■□□□ 1.19
TRIM29-221ENST00000627238 PARP3Q9Y6F1 533 aa22.49■■□□□ 1.19
TRIM29-221ENST00000627238 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
TRIM29-221ENST00000627238 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
TRIM29-221ENST00000627238 KIF3CO14782 793 aa22.48■■□□□ 1.19
TRIM29-221ENST00000627238 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
TRIM29-221ENST00000627238 HSPA6P17066 643 aa22.48■■□□□ 1.19
TRIM29-221ENST00000627238 ZNF526Q8TF50 670 aaPredicted RBP22.47■■□□□ 1.19
TRIM29-221ENST00000627238 VIRMAQ69YN4 1812 aaKnown RBP22.47■■□□□ 1.19
TRIM29-221ENST00000627238 DPEP1P16444 411 aa22.46■■□□□ 1.19
TRIM29-221ENST00000627238 KCNA3P22001 575 aa22.46■■□□□ 1.19
TRIM29-221ENST00000627238 INTS5Q6P9B9 1019 aaKnown RBP22.46■■□□□ 1.19
TRIM29-221ENST00000627238 BCS1LQ9Y276 419 aa22.46■■□□□ 1.19
TRIM29-221ENST00000627238 SLC52A2Q9HAB3 445 aa22.45■■□□□ 1.18
TRIM29-221ENST00000627238 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
TRIM29-221ENST00000627238 KIF7Q2M1P5 1343 aa22.43■■□□□ 1.18
TRIM29-221ENST00000627238 PER1O15534 1290 aaPredicted RBP22.43■■□□□ 1.18
TRIM29-221ENST00000627238 FKBP8Q14318 412 aa22.43■■□□□ 1.18
TRIM29-221ENST00000627238 DDR1Q08345 913 aa22.42■■□□□ 1.18
TRIM29-221ENST00000627238 CCER1Q8TC90 406 aaPredicted RBP22.42■■□□□ 1.18
TRIM29-221ENST00000627238 SRP68Q9UHB9 627 aaKnown RBP22.42■■□□□ 1.18
TRIM29-221ENST00000627238 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
TRIM29-221ENST00000627238 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
TRIM29-221ENST00000627238 NRXN2Q9P2S2 1712 aa22.41■■□□□ 1.18
TRIM29-221ENST00000627238 FCHSD2O94868 740 aa22.41■■□□□ 1.18
TRIM29-221ENST00000627238 TM4SF1P30408 202 aa22.41■■□□□ 1.18
TRIM29-221ENST00000627238 RNMTO43148 476 aaKnown RBP22.4■■□□□ 1.18
TRIM29-221ENST00000627238 LGR6Q9HBX8 967 aa22.4■■□□□ 1.18
TRIM29-221ENST00000627238 PIM2Q9P1W9 311 aa22.4■■□□□ 1.18
TRIM29-221ENST00000627238 POLRMTO00411 1230 aaKnown RBP22.39■■□□□ 1.17
TRIM29-221ENST00000627238 CYP19A1P11511 503 aaPredicted RBP22.39■■□□□ 1.17
TRIM29-221ENST00000627238 ARHGAP27Q6ZUM4 889 aa22.39■■□□□ 1.17
TRIM29-221ENST00000627238 DNAJC10Q8IXB1 793 aa22.39■■□□□ 1.17
TRIM29-221ENST00000627238 VSIG10Q8N0Z9 540 aa22.39■■□□□ 1.17
TRIM29-221ENST00000627238 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
TRIM29-221ENST00000627238 TOMM70O94826 608 aa22.37■■□□□ 1.17
TRIM29-221ENST00000627238 COL3A1P02461 1466 aaPredicted RBP22.36■■□□□ 1.17
TRIM29-221ENST00000627238 MTHFSDQ2M296 383 aaKnown RBP22.36■■□□□ 1.17
TRIM29-221ENST00000627238 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
TRIM29-221ENST00000627238 AFDNP55196 1824 aaKnown RBP22.36■■□□□ 1.17
TRIM29-221ENST00000627238 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
TRIM29-221ENST00000627238 ZPR1O75312 459 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.7 ms