RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 AMIGO3Q86WK7 504 aa12.26□□□□□ -0.45
CHD2-206ENST00000625990 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
CHD2-206ENST00000625990 CGNL1Q0VF96 1302 aa12.26□□□□□ -0.45
CHD2-206ENST00000625990 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
CHD2-206ENST00000625990 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
CHD2-206ENST00000625990 FHDC1Q9C0D6 1143 aaPredicted RBP12.25□□□□□ -0.45
CHD2-206ENST00000625990 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
CHD2-206ENST00000625990 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
CHD2-206ENST00000625990 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
CHD2-206ENST00000625990 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
CHD2-206ENST00000625990 CCNL1Q9UK58 526 aaPredicted RBP12.24□□□□□ -0.45
CHD2-206ENST00000625990 LY75O60449 1722 aa12.23□□□□□ -0.45
CHD2-206ENST00000625990 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
CHD2-206ENST00000625990 WASHC2AQ641Q2 1341 aa12.23□□□□□ -0.45
CHD2-206ENST00000625990 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
CHD2-206ENST00000625990 PCDH11XQ9BZA7 1347 aa12.22□□□□□ -0.45
CHD2-206ENST00000625990 PCDH11YQ9BZA8 1340 aa12.22□□□□□ -0.45
CHD2-206ENST00000625990 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
CHD2-206ENST00000625990 NCAPD2Q15021 1401 aa12.21□□□□□ -0.45
CHD2-206ENST00000625990 RGL2O15211 777 aa12.21□□□□□ -0.45
CHD2-206ENST00000625990 PIGBQ92521 554 aa12.21□□□□□ -0.45
CHD2-206ENST00000625990 MTFR1LQ9H019 292 aa12.21□□□□□ -0.45
CHD2-206ENST00000625990 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.46
CHD2-206ENST00000625990 PALLDQ8WX93 1383 aa12.2□□□□□ -0.46
CHD2-206ENST00000625990 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
CHD2-206ENST00000625990 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
CHD2-206ENST00000625990 COL23A1Q86Y22 540 aaPredicted RBP12.2□□□□□ -0.46
CHD2-206ENST00000625990 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
CHD2-206ENST00000625990 ITGB4P16144 1822 aa12.2□□□□□ -0.46
CHD2-206ENST00000625990 KIF24Q5T7B8 1368 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 PHF14O94880 888 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 NLGN2Q8NFZ4 835 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 ARXQ96QS3 562 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 C5P01031 1676 aa12.19□□□□□ -0.46
CHD2-206ENST00000625990 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
CHD2-206ENST00000625990 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
CHD2-206ENST00000625990 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
CHD2-206ENST00000625990 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 PYGBP11216 843 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
CHD2-206ENST00000625990 PHKG2P15735 406 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 YY1P25490 414 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 ITPK1Q13572 414 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
CHD2-206ENST00000625990 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
CHD2-206ENST00000625990 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
CHD2-206ENST00000625990 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 KDM6AO15550 1401 aaPredicted RBP12.15□□□□□ -0.46
CHD2-206ENST00000625990 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
CHD2-206ENST00000625990 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 SPG7Q9UQ90 795 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
CHD2-206ENST00000625990 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
CHD2-206ENST00000625990 HMOX1P09601 288 aa12.14□□□□□ -0.47
CHD2-206ENST00000625990 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
CHD2-206ENST00000625990 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
CHD2-206ENST00000625990 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
CHD2-206ENST00000625990 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
CHD2-206ENST00000625990 IL13P35225 146 aa12.13□□□□□ -0.47
CHD2-206ENST00000625990 IFNL2Q8IZJ0 200 aa12.13□□□□□ -0.47
CHD2-206ENST00000625990 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
CHD2-206ENST00000625990 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
CHD2-206ENST00000625990 MTHFSP49914 203 aa12.12□□□□□ -0.47
CHD2-206ENST00000625990 SIK1P57059 783 aa12.12□□□□□ -0.47
CHD2-206ENST00000625990 POTEHQ6S545 545 aa12.12□□□□□ -0.47
CHD2-206ENST00000625990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
CHD2-206ENST00000625990 POLD1P28340 1107 aa12.11□□□□□ -0.47
CHD2-206ENST00000625990 AK7Q96M32 723 aa12.11□□□□□ -0.47
CHD2-206ENST00000625990 COL24A1Q17RW2 1714 aa12.11□□□□□ -0.47
CHD2-206ENST00000625990 GNPATO15228 680 aa12.1□□□□□ -0.47
CHD2-206ENST00000625990 YBX3P16989 372 aaKnown RBP eCLIP12.1□□□□□ -0.47
CHD2-206ENST00000625990 ATP6V1AP38606 617 aa12.1□□□□□ -0.47
CHD2-206ENST00000625990 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
CHD2-206ENST00000625990 KDRP35968 1356 aa12.09□□□□□ -0.47
CHD2-206ENST00000625990 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
CHD2-206ENST00000625990 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
CHD2-206ENST00000625990 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
CHD2-206ENST00000625990 GPR162Q16538 588 aa12.08□□□□□ -0.48
CHD2-206ENST00000625990 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
CHD2-206ENST00000625990 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
CHD2-206ENST00000625990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.482e-8■■■□□ 15.2
CHD2-206ENST00000625990 HAX1O00165 279 aa12.07□□□□□ -0.48
CHD2-206ENST00000625990 CABP4P57796 275 aa12.07□□□□□ -0.48
CHD2-206ENST00000625990 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
CHD2-206ENST00000625990 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
CHD2-206ENST00000625990 SLC16A10Q8TF71 515 aa12.07□□□□□ -0.48
CHD2-206ENST00000625990 COL3A1P02461 1466 aaPredicted RBP12.07□□□□□ -0.48
CHD2-206ENST00000625990 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
CHD2-206ENST00000625990 DCAF5Q96JK2 942 aa12.06□□□□□ -0.48
CHD2-206ENST00000625990 MAP3K5Q99683 1374 aa12.05□□□□□ -0.48
CHD2-206ENST00000625990 MTHFSDQ2M296 383 aaKnown RBP12.05□□□□□ -0.48
CHD2-206ENST00000625990 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
CHD2-206ENST00000625990 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
CHD2-206ENST00000625990 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
CHD2-206ENST00000625990 TJP1Q07157 1748 aa12.04□□□□□ -0.48
CHD2-206ENST00000625990 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
CHD2-206ENST00000625990 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms