RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 MRPL50Q8N5N7 158 aaKnown RBP16.56■□□□□ 0.24
SPTAN1-211ENST00000625980 SLC52A2Q9HAB3 445 aa16.56■□□□□ 0.24
SPTAN1-211ENST00000625980 SHANK3Q9BYB0 1731 aa16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 BCL9LQ86UU0 1499 aa16.55■□□□□ 0.24
SPTAN1-211ENST00000625980 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
SPTAN1-211ENST00000625980 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
SPTAN1-211ENST00000625980 NKX1-1Q15270 411 aaPredicted RBP16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 SIPA1L3O60292 1781 aaPredicted RBP16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 RLBP1P12271 317 aa16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 ZKSCAN2Q63HK3 967 aa16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
SPTAN1-211ENST00000625980 CABP4P57796 275 aa16.52■□□□□ 0.24
SPTAN1-211ENST00000625980 SLC39A6Q13433 755 aa16.52■□□□□ 0.24
SPTAN1-211ENST00000625980 MEX3CQ5U5Q3 659 aaKnown RBP16.52■□□□□ 0.24
SPTAN1-211ENST00000625980 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.24
SPTAN1-211ENST00000625980 MRC1P22897 1456 aa16.52■□□□□ 0.23
SPTAN1-211ENST00000625980 EXOC5O00471 708 aa16.51■□□□□ 0.23
SPTAN1-211ENST00000625980 KIF16BQ96L93 1317 aa16.51■□□□□ 0.23
SPTAN1-211ENST00000625980 TRIM27P14373 513 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 VPS72Q15906 364 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 USP21Q9UK80 565 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 WNK3Q9BYP7 1800 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 COG6Q9Y2V7 657 aa16.5■□□□□ 0.23
SPTAN1-211ENST00000625980 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
SPTAN1-211ENST00000625980 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
SPTAN1-211ENST00000625980 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
SPTAN1-211ENST00000625980 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
SPTAN1-211ENST00000625980 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
SPTAN1-211ENST00000625980 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
SPTAN1-211ENST00000625980 HEG1Q9ULI3 1381 aa16.48■□□□□ 0.23
SPTAN1-211ENST00000625980 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
SPTAN1-211ENST00000625980 AFF2P51816 1311 aa16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 DDB1Q16531 1140 aa16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 FAM98CQ17RN3 349 aaKnown RBP16.47■□□□□ 0.23
SPTAN1-211ENST00000625980 GIGYF1O75420 1035 aaPredicted RBP16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 EIF2S2P20042 333 aaKnown RBP16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 G2E3Q7L622 706 aa16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 FTSJ3Q8IY81 847 aaKnown RBP16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
SPTAN1-211ENST00000625980 HOXB7P09629 217 aa16.45■□□□□ 0.22
SPTAN1-211ENST00000625980 ARHGAP45Q92619 1136 aa16.45■□□□□ 0.22
SPTAN1-211ENST00000625980 MS4A1P11836 297 aa16.45■□□□□ 0.22
SPTAN1-211ENST00000625980 TMEM57Q8N5G2 664 aa16.45■□□□□ 0.22
SPTAN1-211ENST00000625980 ZNF496Q96IT1 587 aaPredicted RBP16.45■□□□□ 0.22
SPTAN1-211ENST00000625980 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
SPTAN1-211ENST00000625980 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
SPTAN1-211ENST00000625980 MARCH10Q8NA82 808 aaPredicted RBP16.44■□□□□ 0.22
SPTAN1-211ENST00000625980 CCDC136Q96JN2 1154 aa16.44■□□□□ 0.22
SPTAN1-211ENST00000625980 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
SPTAN1-211ENST00000625980 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.43■□□□□ 0.22
SPTAN1-211ENST00000625980 PIGBQ92521 554 aa16.42■□□□□ 0.22
SPTAN1-211ENST00000625980 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
SPTAN1-211ENST00000625980 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
SPTAN1-211ENST00000625980 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
SPTAN1-211ENST00000625980 CHPF2Q9P2E5 772 aa16.42■□□□□ 0.22
SPTAN1-211ENST00000625980 RGS12O14924 1447 aa16.41■□□□□ 0.22
SPTAN1-211ENST00000625980 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
SPTAN1-211ENST00000625980 ABCC4O15439 1325 aa16.41■□□□□ 0.22
SPTAN1-211ENST00000625980 ANXA1P04083 346 aa16.4■□□□□ 0.22
SPTAN1-211ENST00000625980 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
SPTAN1-211ENST00000625980 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
SPTAN1-211ENST00000625980 PTPRCP08575 1304 aa16.4■□□□□ 0.22
SPTAN1-211ENST00000625980 ATRNO75882 1429 aa16.4■□□□□ 0.22
SPTAN1-211ENST00000625980 GLI3P10071 1580 aa16.39■□□□□ 0.22
SPTAN1-211ENST00000625980 A0A0G2JS52 829 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 MYT1Q01538 1121 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 FLIIQ13045 1269 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 SNRPA1P09661 255 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 PRIM1P49642 420 aaKnown RBP16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 PROSER3Q2NL68 480 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 ACSBG1Q96GR2 724 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 ASAP1Q9ULH1 1129 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
SPTAN1-211ENST00000625980 C5P01031 1676 aa16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 PAPPAQ13219 1627 aa16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 KCPQ6ZWJ8 1503 aa16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 F6X3S4 739 aa16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 ATG3Q9NT62 314 aa16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 TRPC5Q9UL62 973 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-211ENST00000625980 BCL9O00512 1426 aa16.37■□□□□ 0.21
SPTAN1-211ENST00000625980 CHMP4AQ9BY43 222 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms