RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 RRS1Q15050 365 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 NKX1-1Q15270 411 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 FAM98CQ17RN3 349 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 LARP1Q6PKG0 1096 aaKnown RBP9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 LTV1Q96GA3 475 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 MAP3K19Q56UN5 1328 aa9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 SPATA31A5Q5VU36 1347 aa9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 SPATA31A7Q8IWB4 1347 aa9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 BLMP54132 1417 aaPredicted RBP9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 NLRP2Q9NX02 1062 aa9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 COL18A1P39060 1754 aa9.83□□□□□ -0.84
NPLOC4-221ENST00000625705 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 FBLN1P23142 703 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 CC2D1BQ5T0F9 858 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 SEPT12Q8IYM1 358 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 TCP11L2Q8N4U5 519 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 ANKRD24Q8TF21 1146 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 FAM208AQ9UK61 1670 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-221ENST00000625705 FLT4P35916 1363 aa9.81□□□□□ -0.84
NPLOC4-221ENST00000625705 HOXC9P31274 260 aa9.81□□□□□ -0.84
NPLOC4-221ENST00000625705 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
NPLOC4-221ENST00000625705 IP6K1Q92551 441 aa9.81□□□□□ -0.84
NPLOC4-221ENST00000625705 AXIN2Q9Y2T1 843 aa9.81□□□□□ -0.84
NPLOC4-221ENST00000625705 ZNF316A6NFI3 1004 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-221ENST00000625705 SOCS7O14512 581 aa9.8□□□□□ -0.84
NPLOC4-221ENST00000625705 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-221ENST00000625705 MAP2P11137 1827 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 BRWD3Q6RI45 1802 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 NUDT7P0C024 238 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 PDE3BQ13370 1112 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 KRT27Q7Z3Y8 459 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 PCDHGA4Q9Y5G9 962 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 THSD7AQ9UPZ6 1657 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 WNK3Q9BYP7 1800 aa9.79□□□□□ -0.84
NPLOC4-221ENST00000625705 KIF24Q5T7B8 1368 aa9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 SLC34A2O95436 690 aa9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 BARGINQ6ZT62 677 aa9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 CARD10Q9BWT7 1032 aa9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 PEAK1Q9H792 1746 aa9.78□□□□□ -0.84
NPLOC4-221ENST00000625705 INSRP06213 1382 aa9.77□□□□□ -0.84
NPLOC4-221ENST00000625705 SF3B2Q13435 895 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-221ENST00000625705 DDB1Q16531 1140 aa9.77□□□□□ -0.85
NPLOC4-221ENST00000625705 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
NPLOC4-221ENST00000625705 RTN4Q9NQC3 1192 aaKnown RBP9.77□□□□□ -0.85
NPLOC4-221ENST00000625705 PARP4Q9UKK3 1724 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-221ENST00000625705 LRRC37A3O60309 1634 aa9.76□□□□□ -0.85
NPLOC4-221ENST00000625705 IL2RBP14784 551 aa9.76□□□□□ -0.85
NPLOC4-221ENST00000625705 DDX10Q13206 875 aaKnown RBP9.76□□□□□ -0.85
NPLOC4-221ENST00000625705 HSP90AB2PQ58FF8 381 aa9.76□□□□□ -0.85
NPLOC4-221ENST00000625705 RGPD2P0DJD1 1756 aa9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 USHBP1Q8N6Y0 703 aa9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 RAPGEF4Q8WZA2 1011 aa9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 GPHNQ9NQX3 736 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 POLKQ9UBT6 870 aa9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
NPLOC4-221ENST00000625705 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-221ENST00000625705 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-221ENST00000625705 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
NPLOC4-221ENST00000625705 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
NPLOC4-221ENST00000625705 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
NPLOC4-221ENST00000625705 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 EXOC5O00471 708 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 TATP17735 454 aaPredicted RBP9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 MTHFSP49914 203 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 FOXK1P85037 733 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 DSG2Q14126 1118 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 CFAP53Q96M91 514 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 RYDENQ9NUL5 291 aaKnown RBP9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 OVOS2A0A0G2JMS6 1433 aa9.73□□□□□ -0.85
NPLOC4-221ENST00000625705 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
NPLOC4-221ENST00000625705 UPF1Q92900 1129 aaKnown RBP eCLIP9.72□□□□□ -0.85
NPLOC4-221ENST00000625705 DISP2A7MBM2 1401 aa9.72□□□□□ -0.85
NPLOC4-221ENST00000625705 RGPD1P0DJD0 1748 aa9.71□□□□□ -0.85
NPLOC4-221ENST00000625705 EIF4A2Q14240 407 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-221ENST00000625705 NBPF6Q5VWK0 638 aa9.71□□□□□ -0.86
NPLOC4-221ENST00000625705 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
NPLOC4-221ENST00000625705 NBPF4Q96M43 638 aa9.71□□□□□ -0.86
NPLOC4-221ENST00000625705 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
NPLOC4-221ENST00000625705 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
NPLOC4-221ENST00000625705 MEGF6O75095 1541 aa9.7□□□□□ -0.86
NPLOC4-221ENST00000625705 U2SURPO15042 1029 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 TRIM37O94972 964 aa9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 BAG6P46379 1132 aa9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 ZCRB1Q8TBF4 217 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 EYA1Q99502 592 aa9.69□□□□□ -0.86
NPLOC4-221ENST00000625705 PCDH11XQ9BZA7 1347 aa9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 PCDH11YQ9BZA8 1340 aa9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 GTPBP6O43824 516 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 PPP2R1AP30153 589 aa9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 SPG7Q9UQ90 795 aa9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 NUDCQ9Y266 331 aa9.68□□□□□ -0.86
NPLOC4-221ENST00000625705 IGSF1Q8N6C5 1336 aa9.67□□□□□ -0.86
NPLOC4-221ENST00000625705 SULT6B1Q6IMI4 303 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms