RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 WDR17Q8IZU2 1322 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 KIF16BQ96L93 1317 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 DZIP1LQ8IYY4 767 aaKnown RBP12.68□□□□□ -0.38
LINC01943-201ENST00000625410 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 BABAM1Q9NWV8 329 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 NLRP2Q9NX02 1062 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 TSPYL4Q9UJ04 414 aa12.68□□□□□ -0.38
LINC01943-201ENST00000625410 ABCC4O15439 1325 aa12.67□□□□□ -0.38
LINC01943-201ENST00000625410 KCNQ3O43525 872 aa12.67□□□□□ -0.38
LINC01943-201ENST00000625410 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
LINC01943-201ENST00000625410 FNBP4Q8N3X1 1017 aaPredicted RBP12.67□□□□□ -0.38
LINC01943-201ENST00000625410 TMEM57Q8N5G2 664 aa12.67□□□□□ -0.38
LINC01943-201ENST00000625410 PCDHB15Q9Y5E8 787 aa12.67□□□□□ -0.38
LINC01943-201ENST00000625410 GLI3P10071 1580 aa12.67□□□□□ -0.38
LINC01943-201ENST00000625410 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
LINC01943-201ENST00000625410 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 ADAMTS2O95450 1211 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
LINC01943-201ENST00000625410 TAF7Q15545 349 aaPredicted RBP12.66□□□□□ -0.38
LINC01943-201ENST00000625410 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 SKAP1Q86WV1 359 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
LINC01943-201ENST00000625410 COL14A1Q05707 1796 aaKnown RBP12.66□□□□□ -0.38
LINC01943-201ENST00000625410 CYP27B1O15528 508 aa12.65□□□□□ -0.38
LINC01943-201ENST00000625410 IGHDP01880 384 aa12.65□□□□□ -0.38
LINC01943-201ENST00000625410 PHKG2P15735 406 aa12.65□□□□□ -0.38
LINC01943-201ENST00000625410 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
LINC01943-201ENST00000625410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC01943-201ENST00000625410 USP21Q9UK80 565 aa12.65□□□□□ -0.38
LINC01943-201ENST00000625410 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
LINC01943-201ENST00000625410 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
LINC01943-201ENST00000625410 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
LINC01943-201ENST00000625410 EIF4A1P60842 406 aaKnown RBP12.64□□□□□ -0.39
LINC01943-201ENST00000625410 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
LINC01943-201ENST00000625410 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
LINC01943-201ENST00000625410 NRAPQ86VF7 1730 aa12.64□□□□□ -0.39
LINC01943-201ENST00000625410 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
LINC01943-201ENST00000625410 G2E3Q7L622 706 aa12.63□□□□□ -0.39
LINC01943-201ENST00000625410 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
LINC01943-201ENST00000625410 CARD10Q9BWT7 1032 aa12.63□□□□□ -0.39
LINC01943-201ENST00000625410 ATRNO75882 1429 aa12.62□□□□□ -0.39
LINC01943-201ENST00000625410 HOMEZQ8IX15 550 aa12.62□□□□□ -0.39
LINC01943-201ENST00000625410 EP400Q96L91 3159 aa12.62□□□□□ -0.39
LINC01943-201ENST00000625410 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
LINC01943-201ENST00000625410 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
LINC01943-201ENST00000625410 MS4A1P11836 297 aa12.61□□□□□ -0.39
LINC01943-201ENST00000625410 CENPQQ7L2Z9 268 aaPredicted RBP12.61□□□□□ -0.39
LINC01943-201ENST00000625410 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
LINC01943-201ENST00000625410 TOGARAM1Q9Y4F4 1720 aa12.61□□□□□ -0.39
LINC01943-201ENST00000625410 SOS1Q07889 1333 aaPredicted RBP12.61□□□□□ -0.39
LINC01943-201ENST00000625410 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
LINC01943-201ENST00000625410 AAMPQ13685 434 aa12.6□□□□□ -0.39
LINC01943-201ENST00000625410 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
LINC01943-201ENST00000625410 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
LINC01943-201ENST00000625410 C5P01031 1676 aa12.6□□□□□ -0.39
LINC01943-201ENST00000625410 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
LINC01943-201ENST00000625410 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 CCDC125Q86Z20 511 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
LINC01943-201ENST00000625410 SLC52A2Q9HAB3 445 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
LINC01943-201ENST00000625410 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.39
LINC01943-201ENST00000625410 BTBD11A6QL63 1104 aa12.58□□□□□ -0.4
LINC01943-201ENST00000625410 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
LINC01943-201ENST00000625410 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
LINC01943-201ENST00000625410 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
LINC01943-201ENST00000625410 IFNL2Q8IZJ0 200 aa12.58□□□□□ -0.4
LINC01943-201ENST00000625410 BTG4Q9NY30 223 aa12.58□□□□□ -0.4
LINC01943-201ENST00000625410 PTPRCP08575 1304 aa12.58□□□□□ -0.4
LINC01943-201ENST00000625410 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 HOXB7P09629 217 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 TEFQ10587 303 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 NKX1-1Q15270 411 aaPredicted RBP12.57□□□□□ -0.4
LINC01943-201ENST00000625410 STRN4Q9NRL3 753 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 SLIT2O94813 1529 aa12.57□□□□□ -0.4
LINC01943-201ENST00000625410 ATP10DQ9P241 1426 aa12.56□□□□□ -0.4
LINC01943-201ENST00000625410 GIGYF1O75420 1035 aaPredicted RBP12.56□□□□□ -0.4
LINC01943-201ENST00000625410 IL2RBP14784 551 aa12.56□□□□□ -0.4
LINC01943-201ENST00000625410 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
LINC01943-201ENST00000625410 DCAF5Q96JK2 942 aa12.56□□□□□ -0.4
LINC01943-201ENST00000625410 GJD4Q96KN9 370 aaPredicted RBP12.56□□□□□ -0.4
LINC01943-201ENST00000625410 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
LINC01943-201ENST00000625410 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 SIRT2Q8IXJ6 389 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 NECTIN2Q92692 538 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 UBR2Q8IWV8 1755 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
LINC01943-201ENST00000625410 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 F6X3S4 739 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 FLIIQ13045 1269 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
LINC01943-201ENST00000625410 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms