RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
DDX41-218ENST00000625286 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
DDX41-218ENST00000625286 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
DDX41-218ENST00000625286 MYH14Q7Z406 1995 aaKnown RBP15.28■□□□□ 0.04
DDX41-218ENST00000625286 MMP10P09238 476 aa15.28■□□□□ 0.04
DDX41-218ENST00000625286 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
DDX41-218ENST00000625286 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
DDX41-218ENST00000625286 PANK3Q9H999 370 aa15.27■□□□□ 0.04
DDX41-218ENST00000625286 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
DDX41-218ENST00000625286 KDM6AO15550 1401 aaPredicted RBP15.26■□□□□ 0.03
DDX41-218ENST00000625286 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
DDX41-218ENST00000625286 AEBP1Q8IUX7 1158 aa15.26■□□□□ 0.03
DDX41-218ENST00000625286 ARHGEF1Q92888 912 aaKnown RBP15.26■□□□□ 0.03
DDX41-218ENST00000625286 GPBP1L1Q9HC44 474 aaPredicted RBP15.26■□□□□ 0.03
DDX41-218ENST00000625286 N4BP2Q86UW6 1770 aaPredicted RBP15.26■□□□□ 0.03
DDX41-218ENST00000625286 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
DDX41-218ENST00000625286 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
DDX41-218ENST00000625286 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
DDX41-218ENST00000625286 COL5A3P25940 1745 aaPredicted RBP15.24■□□□□ 0.03
DDX41-218ENST00000625286 A0A0G2JLW4 131 aa15.24■□□□□ 0.03
DDX41-218ENST00000625286 GYS1P13807 737 aa15.24■□□□□ 0.03
DDX41-218ENST00000625286 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
DDX41-218ENST00000625286 DCAF5Q96JK2 942 aa15.24■□□□□ 0.03
DDX41-218ENST00000625286 ZNF831Q5JPB2 1677 aa15.24■□□□□ 0.03
DDX41-218ENST00000625286 KIF3CO14782 793 aa15.23■□□□□ 0.03
DDX41-218ENST00000625286 RC3H1Q5TC82 1133 aaKnown RBP15.23■□□□□ 0.03
DDX41-218ENST00000625286 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
DDX41-218ENST00000625286 CICQ96RK0 1608 aaPredicted RBP15.23■□□□□ 0.03
DDX41-218ENST00000625286 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
DDX41-218ENST00000625286 KCNA3P22001 575 aa15.22■□□□□ 0.03
DDX41-218ENST00000625286 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
DDX41-218ENST00000625286 ZNF530Q6P9A1 599 aaPredicted RBP15.22■□□□□ 0.03
DDX41-218ENST00000625286 PCGF6Q9BYE7 350 aa15.22■□□□□ 0.03
DDX41-218ENST00000625286 PLEKHG2Q9H7P9 1386 aa15.22■□□□□ 0.03
DDX41-218ENST00000625286 CNTNAP4Q9C0A0 1308 aa15.21■□□□□ 0.03
DDX41-218ENST00000625286 NLGN1Q8N2Q7 840 aa15.21■□□□□ 0.03
DDX41-218ENST00000625286 C10orf71Q711Q0 1435 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
DDX41-218ENST00000625286 DPEP1P16444 411 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 HSPA6P17066 643 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 CABP4P57796 275 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 TGFB2P61812 414 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 C4AP0C0L4 1744 aa15.2■□□□□ 0.02
DDX41-218ENST00000625286 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
DDX41-218ENST00000625286 IL13P35225 146 aa15.19■□□□□ 0.02
DDX41-218ENST00000625286 MTHFSP49914 203 aa15.19■□□□□ 0.02
DDX41-218ENST00000625286 EIF4G2P78344 907 aaKnown RBP eCLIP15.19■□□□□ 0.02
DDX41-218ENST00000625286 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
DDX41-218ENST00000625286 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
DDX41-218ENST00000625286 HSP90AB1P08238 724 aaKnown RBP15.18■□□□□ 0.02
DDX41-218ENST00000625286 ADRA2BP18089 450 aa15.18■□□□□ 0.02
DDX41-218ENST00000625286 CRKLP46109 303 aaKnown RBP15.18■□□□□ 0.02
DDX41-218ENST00000625286 AMOTQ4VCS5 1084 aa15.18■□□□□ 0.02
DDX41-218ENST00000625286 SULT6B1Q6IMI4 303 aa15.18■□□□□ 0.02
DDX41-218ENST00000625286 BCS1LQ9Y276 419 aa15.18■□□□□ 0.02
DDX41-218ENST00000625286 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 ADAMTS7Q9UKP4 1686 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 RFC4P35249 363 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 DDR1Q08345 913 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 FKBP8Q14318 412 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
DDX41-218ENST00000625286 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 TJP1Q07157 1748 aa15.17■□□□□ 0.02
DDX41-218ENST00000625286 ARHGAP27Q6ZUM4 889 aa15.16■□□□□ 0.02
DDX41-218ENST00000625286 LGR6Q9HBX8 967 aa15.16■□□□□ 0.02
DDX41-218ENST00000625286 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
DDX41-218ENST00000625286 SCN11AQ9UI33 1791 aa15.15■□□□□ 0.02
DDX41-218ENST00000625286 FCHSD2O94868 740 aa15.14■□□□□ 0.01
DDX41-218ENST00000625286 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
DDX41-218ENST00000625286 NMRK2Q9NPI5 230 aa15.14■□□□□ 0.01
DDX41-218ENST00000625286 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
DDX41-218ENST00000625286 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
DDX41-218ENST00000625286 TM4SF1P30408 202 aa15.13■□□□□ 0.01
DDX41-218ENST00000625286 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
DDX41-218ENST00000625286 DNAJC10Q8IXB1 793 aa15.13■□□□□ 0.01
DDX41-218ENST00000625286 CHRNA5P30532 468 aa15.12■□□□□ 0.01
DDX41-218ENST00000625286 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
DDX41-218ENST00000625286 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
DDX41-218ENST00000625286 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
DDX41-218ENST00000625286 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
DDX41-218ENST00000625286 DNAJC5GQ8N7S2 189 aa15.11■□□□□ 0.01
DDX41-218ENST00000625286 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
DDX41-218ENST00000625286 CYP19A1P11511 503 aaPredicted RBP15.1■□□□□ 0.01
DDX41-218ENST00000625286 AKAP4Q5JQC9 854 aa15.1■□□□□ 0.01
DDX41-218ENST00000625286 PIM2Q9P1W9 311 aa15.1■□□□□ 0.01
DDX41-218ENST00000625286 KNSTRNQ9Y448 316 aa15.1■□□□□ 0.01
DDX41-218ENST00000625286 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
DDX41-218ENST00000625286 PER1O15534 1290 aaPredicted RBP15.09■□□□□ 0.01
DDX41-218ENST00000625286 RNMTO43148 476 aaKnown RBP15.09■□□□□ 0.01
DDX41-218ENST00000625286 TOMM70O94826 608 aa15.09■□□□□ 0.01
DDX41-218ENST00000625286 HMOX1P09601 288 aa15.09■□□□□ 0.01
DDX41-218ENST00000625286 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
DDX41-218ENST00000625286 BCL2L12Q9HB09 334 aa15.09■□□□□ 0.01
DDX41-218ENST00000625286 SBF1O95248 1867 aa15.09■□□□□ 0.01
DDX41-218ENST00000625286 SOS1Q07889 1333 aaPredicted RBP15.09■□□□□ 0.01
DDX41-218ENST00000625286 MTHFSDQ2M296 383 aaKnown RBP15.08■□□□□ 0
DDX41-218ENST00000625286 DALRD3Q5D0E6 543 aaKnown RBP15.08■□□□□ 0
DDX41-218ENST00000625286 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
DDX41-218ENST00000625286 AFDNP55196 1824 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms