RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ZNF142P52746 1687 aaPredicted RBP6.67□□□□□ -1.34
ERCC6-213ENST00000624341 RRP12Q5JTH9 1297 aaKnown RBP6.67□□□□□ -1.34
ERCC6-213ENST00000624341 AMOTL1Q8IY63 956 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 CDK19Q9BWU1 502 aa6.67□□□□□ -1.34
ERCC6-213ENST00000624341 XRCC6P12956 609 aaKnown RBP eCLIP6.66□□□□□ -1.34
ERCC6-213ENST00000624341 RRS1Q15050 365 aaKnown RBP6.66□□□□□ -1.34
ERCC6-213ENST00000624341 ANKRD1Q15327 319 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 ERC1Q8IUD2 1116 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 DDX11Q96FC9 970 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 A2MP01023 1474 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 CASTP20810 708 aaKnown RBP6.66□□□□□ -1.34
ERCC6-213ENST00000624341 CDR1P51861 262 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 CCDC83Q8IWF9 413 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 LRPPRCP42704 1394 aaKnown RBP6.66□□□□□ -1.34
ERCC6-213ENST00000624341 ANKRD30BQ9BXX2 1392 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 TXNDC2Q86VQ3 553 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 TBC1D32Q96NH3 1257 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 NOL10Q9BSC4 688 aaKnown RBP6.66□□□□□ -1.34
ERCC6-213ENST00000624341 TSPYL1Q9H0U9 437 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 MIS18AQ9NYP9 233 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 PLXNC1O60486 1568 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 FCHSD2O94868 740 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 XBP1P17861 261 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 AACSQ86V21 672 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 CEP57L1Q8IYX8 460 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 ZMYND15Q9H091 742 aa6.66□□□□□ -1.34
ERCC6-213ENST00000624341 DCTN1Q14203 1278 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 SMARCE1Q969G3 411 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 BRMS1Q9HCU9 246 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 DAPK1P53355 1430 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 NCOA1Q15788 1441 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 NKTRP30414 1462 aaKnown RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 TRIM27P14373 513 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 ZSCAN31Q96LW9 406 aaPredicted RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 RBM27Q9P2N5 1060 aaKnown RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 CLTCQ00610 1675 aaKnown RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 BAG4O95429 457 aaKnown RBP6.65□□□□□ -1.34
ERCC6-213ENST00000624341 ABTB2Q8N961 1025 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 JMYQ8N9B5 988 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 UBXN4Q92575 508 aa6.65□□□□□ -1.34
ERCC6-213ENST00000624341 NFE2L2Q16236 605 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.35
ERCC6-213ENST00000624341 CFAP45Q9UL16 551 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 NSD3Q9BZ95 1437 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 SART3Q15020 963 aaKnown RBP6.65□□□□□ -1.35
ERCC6-213ENST00000624341 ADGRL2O95490 1459 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 CAMSAP2Q08AD1 1489 aa6.65□□□□□ -1.35
ERCC6-213ENST00000624341 HSPA2P54652 639 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 MX1P20591 662 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 PTPN14Q15678 1187 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC183Q5T5S1 534 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 TBC1D9Q6ZT07 1266 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 TBC1D2BQ9UPU7 963 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
ERCC6-213ENST00000624341 GCC2Q8IWJ2 1684 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 PLA2R1Q13018 1463 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 PRPF40BQ6NWY9 871 aaKnown RBP6.64□□□□□ -1.35
ERCC6-213ENST00000624341 UBE2Q2Q8WVN8 375 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 C16orf45Q96MC5 204 aaPredicted RBP6.64□□□□□ -1.35
ERCC6-213ENST00000624341 STRCQ7RTU9 1775 aa6.64□□□□□ -1.35
ERCC6-213ENST00000624341 MYO3AQ8NEV4 1616 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 CLCN1P35523 988 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 EPS15P42566 896 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 MCM10Q7L590 875 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 TRERF1Q96PN7 1200 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 CT47A1Q5JQC4 288 aaPredicted RBP6.63□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC141Q6ZP82 1450 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 SPDYE4A6NLX3 237 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 CFAP100Q494V2 611 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 SAMD1Q6SPF0 538 aaPredicted RBP6.63□□□□□ -1.35
ERCC6-213ENST00000624341 TRMT1Q9NXH9 659 aaKnown RBP6.63□□□□□ -1.35
ERCC6-213ENST00000624341 MAGEC2Q9UBF1 373 aaPredicted RBP6.63□□□□□ -1.35
ERCC6-213ENST00000624341 PCDHB15Q9Y5E8 787 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 ZMYM3Q14202 1370 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 F6X3S4 739 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 ERLIN1O75477 346 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 FAM193AP78312 1265 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 PLEKHO1Q53GL0 409 aaPredicted RBP6.63□□□□□ -1.35
ERCC6-213ENST00000624341 TNNT1P13805 278 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 KLHL40Q2TBA0 621 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 C8orf34Q49A92 452 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 CCDC102AQ96A19 550 aa6.63□□□□□ -1.35
ERCC6-213ENST00000624341 ZC3H13Q5T200 1668 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 ADCY5O95622 1261 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 MYL6BP14649 208 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 SFPQP23246 707 aaKnown RBP eCLIP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 FKBP4Q02790 459 aaKnown RBP eCLIP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 TMCO3Q6UWJ1 677 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 ZNHIT6Q9NWK9 470 aaKnown RBP6.62□□□□□ -1.35
ERCC6-213ENST00000624341 TCEAL9Q9UHQ7 104 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 KDM5DQ9BY66 1539 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 GPRASP1Q5JY77 1395 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CAMSAP1Q5T5Y3 1602 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 CBFA2T2O43439 604 aa6.62□□□□□ -1.35
ERCC6-213ENST00000624341 DHX8Q14562 1220 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms