RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 PCDH11XQ9BZA7 1347 aa20.8■□□□□ 0.92
SNX12-206ENST00000622259 PCDH11YQ9BZA8 1340 aa20.8■□□□□ 0.92
SNX12-206ENST00000622259 TATP17735 454 aaPredicted RBP20.8■□□□□ 0.92
SNX12-206ENST00000622259 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
SNX12-206ENST00000622259 ROCK2O75116 1388 aaKnown RBP20.79■□□□□ 0.92
SNX12-206ENST00000622259 SBF1O95248 1867 aa20.77■□□□□ 0.92
SNX12-206ENST00000622259 RRS1Q15050 365 aaKnown RBP20.77■□□□□ 0.92
SNX12-206ENST00000622259 DCAF5Q96JK2 942 aa20.77■□□□□ 0.92
SNX12-206ENST00000622259 C4AP0C0L4 1744 aa20.76■□□□□ 0.91
SNX12-206ENST00000622259 TMF1P82094 1093 aa20.75■□□□□ 0.91
SNX12-206ENST00000622259 COG3Q96JB2 828 aa20.75■□□□□ 0.91
SNX12-206ENST00000622259 CCDC87Q9NVE4 849 aa20.75■□□□□ 0.91
SNX12-206ENST00000622259 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
SNX12-206ENST00000622259 ATP6V1AP38606 617 aa20.74■□□□□ 0.91
SNX12-206ENST00000622259 NLGN1Q8N2Q7 840 aa20.74■□□□□ 0.91
SNX12-206ENST00000622259 TERF2IPQ9NYB0 399 aa20.74■□□□□ 0.91
SNX12-206ENST00000622259 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
SNX12-206ENST00000622259 GYS1P13807 737 aa20.72■□□□□ 0.91
SNX12-206ENST00000622259 PIM2Q9P1W9 311 aa20.72■□□□□ 0.91
SNX12-206ENST00000622259 FOXN1O15353 648 aa20.71■□□□□ 0.91
SNX12-206ENST00000622259 TRAPPC3LQ5T215 181 aa20.71■□□□□ 0.91
SNX12-206ENST00000622259 ARHGEF1Q92888 912 aaKnown RBP20.71■□□□□ 0.91
SNX12-206ENST00000622259 RASSF7Q02833 373 aa20.7■□□□□ 0.9
SNX12-206ENST00000622259 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
SNX12-206ENST00000622259 DALRD3Q5D0E6 543 aaKnown RBP20.7■□□□□ 0.9
SNX12-206ENST00000622259 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
SNX12-206ENST00000622259 HSP90AB2PQ58FF8 381 aa20.69■□□□□ 0.9
SNX12-206ENST00000622259 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
SNX12-206ENST00000622259 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
SNX12-206ENST00000622259 CHRNA5P30532 468 aa20.68■□□□□ 0.9
SNX12-206ENST00000622259 SLC4A9Q96Q91 983 aa20.68■□□□□ 0.9
SNX12-206ENST00000622259 PCDH10Q9P2E7 1040 aa20.68■□□□□ 0.9
SNX12-206ENST00000622259 MKRN1Q9UHC7 482 aaKnown RBP20.68■□□□□ 0.9
SNX12-206ENST00000622259 SMG6Q86US8 1419 aaKnown RBP20.68■□□□□ 0.9
SNX12-206ENST00000622259 VEGFAP15692 232 aaPredicted RBP20.67■□□□□ 0.9
SNX12-206ENST00000622259 ATG3Q9NT62 314 aa20.67■□□□□ 0.9
SNX12-206ENST00000622259 GLTPD2A6NH11 291 aa20.66■□□□□ 0.9
SNX12-206ENST00000622259 POTECB2RU33 542 aa20.66■□□□□ 0.9
SNX12-206ENST00000622259 TMOD3Q9NYL9 352 aa20.66■□□□□ 0.9
SNX12-206ENST00000622259 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
SNX12-206ENST00000622259 KDRP35968 1356 aa20.65■□□□□ 0.9
SNX12-206ENST00000622259 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.89
SNX12-206ENST00000622259 INSRP06213 1382 aa20.63■□□□□ 0.89
SNX12-206ENST00000622259 DDR1Q08345 913 aa20.63■□□□□ 0.89
SNX12-206ENST00000622259 ZC3H4Q9UPT8 1303 aaKnown RBP20.62■□□□□ 0.89
SNX12-206ENST00000622259 RFC4P35249 363 aa20.62■□□□□ 0.89
SNX12-206ENST00000622259 ADRA2BP18089 450 aa20.61■□□□□ 0.89
SNX12-206ENST00000622259 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
SNX12-206ENST00000622259 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
SNX12-206ENST00000622259 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
SNX12-206ENST00000622259 CREBZFQ9NS37 354 aa20.6■□□□□ 0.89
SNX12-206ENST00000622259 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
SNX12-206ENST00000622259 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
SNX12-206ENST00000622259 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
SNX12-206ENST00000622259 FKBP8Q14318 412 aa20.59■□□□□ 0.89
SNX12-206ENST00000622259 RC3H1Q5TC82 1133 aaKnown RBP20.59■□□□□ 0.89
SNX12-206ENST00000622259 FYB1O15117 783 aa20.58■□□□□ 0.89
SNX12-206ENST00000622259 LMNB1P20700 586 aa20.58■□□□□ 0.89
SNX12-206ENST00000622259 PUS7Q96PZ0 661 aaKnown RBP20.58■□□□□ 0.89
SNX12-206ENST00000622259 NCAPD2Q15021 1401 aa20.58■□□□□ 0.88
SNX12-206ENST00000622259 TIAM2Q8IVF5 1701 aa20.58■□□□□ 0.88
SNX12-206ENST00000622259 CNTNAP4Q9C0A0 1308 aa20.57■□□□□ 0.88
SNX12-206ENST00000622259 CCDC88AQ3V6T2 1871 aa20.57■□□□□ 0.88
SNX12-206ENST00000622259 ABHD8Q96I13 439 aa20.57■□□□□ 0.88
SNX12-206ENST00000622259 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
SNX12-206ENST00000622259 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
SNX12-206ENST00000622259 FLT4P35916 1363 aa20.57■□□□□ 0.88
SNX12-206ENST00000622259 POTEIP0CG38 1075 aa20.56■□□□□ 0.88
SNX12-206ENST00000622259 POTEJP0CG39 1038 aa20.56■□□□□ 0.88
SNX12-206ENST00000622259 PHKG2P15735 406 aa20.56■□□□□ 0.88
SNX12-206ENST00000622259 CTCFP49711 727 aaPredicted RBP20.56■□□□□ 0.88
SNX12-206ENST00000622259 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
SNX12-206ENST00000622259 CNTNAP1P78357 1384 aa20.56■□□□□ 0.88
SNX12-206ENST00000622259 LBX1P52954 281 aa20.55■□□□□ 0.88
SNX12-206ENST00000622259 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
SNX12-206ENST00000622259 POLRMTO00411 1230 aaKnown RBP20.54■□□□□ 0.88
SNX12-206ENST00000622259 USP42Q9H9J4 1324 aaKnown RBP20.53■□□□□ 0.88
SNX12-206ENST00000622259 NFKBIEO00221 500 aa20.52■□□□□ 0.88
SNX12-206ENST00000622259 CHADLQ6NUI6 762 aa20.52■□□□□ 0.88
SNX12-206ENST00000622259 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
SNX12-206ENST00000622259 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
SNX12-206ENST00000622259 VEGFBP49765 207 aa20.51■□□□□ 0.87
SNX12-206ENST00000622259 AIDAQ96BJ3 306 aa20.51■□□□□ 0.87
SNX12-206ENST00000622259 WBP1LQ9NX94 342 aa20.51■□□□□ 0.87
SNX12-206ENST00000622259 TM4SF1P30408 202 aa20.5■□□□□ 0.87
SNX12-206ENST00000622259 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
SNX12-206ENST00000622259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.5■□□□□ 0.87
SNX12-206ENST00000622259 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
SNX12-206ENST00000622259 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
SNX12-206ENST00000622259 VIRMAQ69YN4 1812 aaKnown RBP20.48■□□□□ 0.87
SNX12-206ENST00000622259 HSPA8P11142 646 aaKnown RBP20.48■□□□□ 0.87
SNX12-206ENST00000622259 MLLT1Q03111 559 aaPredicted RBP20.48■□□□□ 0.87
SNX12-206ENST00000622259 TESK2Q96S53 571 aa20.48■□□□□ 0.87
SNX12-206ENST00000622259 EYA1Q99502 592 aa20.48■□□□□ 0.87
SNX12-206ENST00000622259 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
SNX12-206ENST00000622259 CRKLP46109 303 aaKnown RBP20.47■□□□□ 0.87
SNX12-206ENST00000622259 PASKQ96RG2 1323 aa20.47■□□□□ 0.87
SNX12-206ENST00000622259 AFDNP55196 1824 aaKnown RBP20.46■□□□□ 0.87
SNX12-206ENST00000622259 RGS19P49795 217 aa20.46■□□□□ 0.87
SNX12-206ENST00000622259 DLEC1Q9Y238 1755 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms