RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SEPT3Q9UH03 358 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 A0A0G2JS52 829 aa8.43□□□□□ -1.06
CPNE3-213ENST00000622183 ICMTO60725 284 aa8.43□□□□□ -1.06
CPNE3-213ENST00000622183 ABL1P00519 1130 aa8.43□□□□□ -1.06
CPNE3-213ENST00000622183 NNTQ13423 1086 aa8.43□□□□□ -1.06
CPNE3-213ENST00000622183 GTF3C2Q8WUA4 911 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-213ENST00000622183 MKNK1Q9BUB5 465 aa8.43□□□□□ -1.06
CPNE3-213ENST00000622183 C21orf2O43822 256 aa8.42□□□□□ -1.06
CPNE3-213ENST00000622183 ADH1AP07327 375 aa8.42□□□□□ -1.06
CPNE3-213ENST00000622183 FOXK2Q01167 660 aa8.42□□□□□ -1.06
CPNE3-213ENST00000622183 ZNF211Q13398 564 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-213ENST00000622183 CAPN12Q6ZSI9 719 aa8.42□□□□□ -1.06
CPNE3-213ENST00000622183 SNIP1Q8TAD8 396 aaKnown RBP8.42□□□□□ -1.06
CPNE3-213ENST00000622183 TSPAN10Q9H1Z9 355 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-213ENST00000622183 SCHIP1Q9P0W5 487 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-213ENST00000622183 WASF2Q9Y6W5 498 aa8.42□□□□□ -1.06
CPNE3-213ENST00000622183 V9GY48 417 aaPredicted RBP8.42□□□□□ -1.06
CPNE3-213ENST00000622183 ATAD2Q6PL18 1390 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 A6NJY4 79 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 H3BRB1 525 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 SMTNP53814 917 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 FOXC1Q12948 553 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
CPNE3-213ENST00000622183 MTFR1Q15390 333 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 XAGE2Q96GT9 111 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 TUT1Q9H6E5 874 aaKnown RBP8.41□□□□□ -1.06
CPNE3-213ENST00000622183 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
CPNE3-213ENST00000622183 BIN2Q9UBW5 565 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-213ENST00000622183 DNMT3AQ9Y6K1 912 aaPredicted RBP8.41□□□□□ -1.06
CPNE3-213ENST00000622183 IL2RAP01589 272 aa8.4□□□□□ -1.06
CPNE3-213ENST00000622183 ERCC3P19447 782 aa8.4□□□□□ -1.06
CPNE3-213ENST00000622183 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
CPNE3-213ENST00000622183 DNAJC14Q6Y2X3 702 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-213ENST00000622183 GLYCTKQ8IVS8 523 aa8.4□□□□□ -1.06
CPNE3-213ENST00000622183 STAG2Q8N3U4 1231 aa8.4□□□□□ -1.06
CPNE3-213ENST00000622183 KDF1Q8NAX2 398 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-213ENST00000622183 KLF16Q9BXK1 252 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-213ENST00000622183 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
CPNE3-213ENST00000622183 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
CPNE3-213ENST00000622183 FKBP4Q02790 459 aaKnown RBP eCLIP8.39□□□□□ -1.07
CPNE3-213ENST00000622183 CLN3Q13286 438 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 Q6ZVU0 165 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 SLC9A9Q8IVB4 645 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 HELQQ8TDG4 1101 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 CNKSR1Q969H4 720 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 ESYT1Q9BSJ8 1104 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 ANO2Q9NQ90 1003 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 HRH3Q9Y5N1 445 aa8.39□□□□□ -1.07
CPNE3-213ENST00000622183 CDK2AP1O14519 115 aa8.38□□□□□ -1.07
CPNE3-213ENST00000622183 VTI1AQ96AJ9 217 aa8.38□□□□□ -1.07
CPNE3-213ENST00000622183 ITPKCQ96DU7 683 aa8.38□□□□□ -1.07
CPNE3-213ENST00000622183 A0A1W2PRU2 124 aa8.37□□□□□ -1.07
CPNE3-213ENST00000622183 RBM25P49756 843 aaKnown RBP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 PSMA6P60900 246 aaKnown RBP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 CBLBQ13191 982 aa8.37□□□□□ -1.07
CPNE3-213ENST00000622183 TLR1Q15399 786 aa8.37□□□□□ -1.07
CPNE3-213ENST00000622183 ECM1Q16610 540 aa8.37□□□□□ -1.07
CPNE3-213ENST00000622183 CHMP7Q8WUX9 453 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 ZNF428Q96B54 188 aa8.37□□□□□ -1.07
CPNE3-213ENST00000622183 C2orf49Q9BVC5 232 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 IQSEC3Q9UPP2 1182 aaPredicted RBP8.37□□□□□ -1.07
CPNE3-213ENST00000622183 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-213ENST00000622183 J3QL48 77 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 GDF9O60383 454 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 ZIC2O95409 532 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-213ENST00000622183 PTGIRP43119 386 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
CPNE3-213ENST00000622183 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
CPNE3-213ENST00000622183 TBCELQ5QJ74 424 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 POTEAQ6S8J7 498 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
CPNE3-213ENST00000622183 NPR3P17342 541 aa8.35□□□□□ -1.07
CPNE3-213ENST00000622183 ARHGAP4P98171 946 aa8.35□□□□□ -1.07
CPNE3-213ENST00000622183 NOM1Q5C9Z4 860 aaKnown RBP8.35□□□□□ -1.07
CPNE3-213ENST00000622183 CYP4X1Q8N118 509 aa8.35□□□□□ -1.07
CPNE3-213ENST00000622183 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
CPNE3-213ENST00000622183 ZFAND3Q9H8U3 227 aa8.35□□□□□ -1.07
CPNE3-213ENST00000622183 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
CPNE3-213ENST00000622183 TIMP2P16035 220 aa8.34□□□□□ -1.07
CPNE3-213ENST00000622183 C16orf46Q6P387 395 aa8.34□□□□□ -1.07
CPNE3-213ENST00000622183 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
CPNE3-213ENST00000622183 RBM47A0AV96 593 aaKnown RBP8.33□□□□□ -1.08
CPNE3-213ENST00000622183 FAM13AO94988 1023 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 SMPD1P17405 629 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
CPNE3-213ENST00000622183 CENPCQ03188 943 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 ZNF295-AS1Q8N0V1 137 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 AGBL1Q96MI9 1066 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 CHMP3Q9Y3E7 222 aa8.33□□□□□ -1.08
CPNE3-213ENST00000622183 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
CPNE3-213ENST00000622183 MEN1O00255 615 aa8.32□□□□□ -1.08
CPNE3-213ENST00000622183 TEAD4Q15561 434 aa8.32□□□□□ -1.08
CPNE3-213ENST00000622183 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms