RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 KRT28Q7Z3Y7 464 aa15.93■□□□□ 0.14
SIRPA-204ENST00000622179 CCDC8Q9H0W5 538 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-204ENST00000622179 MBD3O95983 291 aa15.93■□□□□ 0.14
SIRPA-204ENST00000622179 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
SIRPA-204ENST00000622179 BOLA2Q9H3K6 86 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 METP08581 1390 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 RAB11FIP3O75154 756 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 FAM43AQ8N2R8 423 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
SIRPA-204ENST00000622179 EFCAB6Q5THR3 1501 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 ANKRD24Q8TF21 1146 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 CCDC85AQ96PX6 553 aaPredicted RBP15.92■□□□□ 0.14
SIRPA-204ENST00000622179 CPLX1O14810 134 aa15.92■□□□□ 0.14
SIRPA-204ENST00000622179 GLRX3O76003 335 aaKnown RBP15.92■□□□□ 0.14
SIRPA-204ENST00000622179 CHL1O00533 1208 aa15.91■□□□□ 0.14
SIRPA-204ENST00000622179 CASTP20810 708 aaKnown RBP15.91■□□□□ 0.14
SIRPA-204ENST00000622179 MYD88Q99836 296 aa15.91■□□□□ 0.14
SIRPA-204ENST00000622179 MPNDQ8N594 471 aa15.91■□□□□ 0.14
SIRPA-204ENST00000622179 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
SIRPA-204ENST00000622179 SHROOM2Q13796 1616 aa15.91■□□□□ 0.14
SIRPA-204ENST00000622179 HIP1O00291 1037 aa15.91■□□□□ 0.14
SIRPA-204ENST00000622179 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 HOXC9P31274 260 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 PRPF40BQ6NWY9 871 aaKnown RBP15.9■□□□□ 0.14
SIRPA-204ENST00000622179 WDR33Q9C0J8 1336 aaKnown RBP15.9■□□□□ 0.14
SIRPA-204ENST00000622179 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
SIRPA-204ENST00000622179 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 E9PCH4 1651 aa15.9■□□□□ 0.14
SIRPA-204ENST00000622179 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
SIRPA-204ENST00000622179 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 PDRG1Q9NUG6 133 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
SIRPA-204ENST00000622179 BECN2A8MW95 431 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 SLC39A6Q13433 755 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 RHPN1Q8TCX5 695 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 MSH6P52701 1360 aa15.89■□□□□ 0.13
SIRPA-204ENST00000622179 MADDQ8WXG6 1647 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 TRDNQ13061 729 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 ATP8B2P98198 1209 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 ABCC3O15438 1527 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 GOLGA6L19H0YKK7 550 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 KDM4AO75164 1064 aa15.88■□□□□ 0.13
SIRPA-204ENST00000622179 ISY1Q9ULR0 285 aaKnown RBP15.88■□□□□ 0.13
SIRPA-204ENST00000622179 CEBPZQ03701 1054 aaKnown RBP15.87■□□□□ 0.13
SIRPA-204ENST00000622179 BLOC1S2Q6QNY1 142 aa15.87■□□□□ 0.13
SIRPA-204ENST00000622179 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
SIRPA-204ENST00000622179 BAG4O95429 457 aaKnown RBP15.87■□□□□ 0.13
SIRPA-204ENST00000622179 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
SIRPA-204ENST00000622179 LARP1BQ659C4 914 aaKnown RBP15.87■□□□□ 0.13
SIRPA-204ENST00000622179 CCDC83Q8IWF9 413 aa15.87■□□□□ 0.13
SIRPA-204ENST00000622179 SYCE3A1L190 88 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 RALYLQ86SE5 291 aaKnown RBP15.86■□□□□ 0.13
SIRPA-204ENST00000622179 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 HYPKQ9NX55 129 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 ARAP3Q8WWN8 1544 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 ATP5J2-PTCD1G3V325 749 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
SIRPA-204ENST00000622179 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
SIRPA-204ENST00000622179 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
SIRPA-204ENST00000622179 TSPY26PQ9H489 355 aa15.86■□□□□ 0.13
SIRPA-204ENST00000622179 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
SIRPA-204ENST00000622179 SNX21Q969T3 373 aa15.85■□□□□ 0.13
SIRPA-204ENST00000622179 PLEKHG3A1L390 1219 aa15.85■□□□□ 0.13
SIRPA-204ENST00000622179 PDCP20941 246 aa15.85■□□□□ 0.13
SIRPA-204ENST00000622179 CPLX2Q6PUV4 134 aaKnown RBP15.85■□□□□ 0.13
SIRPA-204ENST00000622179 ECHDC1Q9NTX5 307 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 CCDC173Q0VFZ6 552 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 TULP1O00294 542 aaPredicted RBP15.84■□□□□ 0.13
SIRPA-204ENST00000622179 GCP02774 474 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 CABLES1Q8TDN4 633 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
SIRPA-204ENST00000622179 CFAP74Q9C0B2 1584 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 A0A087WZG4 1122 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
SIRPA-204ENST00000622179 PA2G4Q9UQ80 394 aaKnown RBP15.84■□□□□ 0.13
SIRPA-204ENST00000622179 CCDC57Q2TAC2 916 aa15.83■□□□□ 0.13
SIRPA-204ENST00000622179 TMX3Q96JJ7 454 aa15.83■□□□□ 0.13
SIRPA-204ENST00000622179 SASS6Q6UVJ0 657 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 CHMP4CQ96CF2 233 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 LGR6Q9HBX8 967 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 TPM4P67936 248 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 CWF19L2Q2TBE0 894 aaKnown RBP15.83■□□□□ 0.12
SIRPA-204ENST00000622179 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
SIRPA-204ENST00000622179 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 UBE3BQ7Z3V4 1068 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 PANK2Q9BZ23 570 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 RBM25P49756 843 aaKnown RBP15.82■□□□□ 0.12
SIRPA-204ENST00000622179 CNNM1Q9NRU3 951 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 PRR36Q9H6K5 1346 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 ESPNB1AK53 854 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
SIRPA-204ENST00000622179 CCDC158Q5M9N0 1113 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 USP26Q9BXU7 913 aa15.82■□□□□ 0.12
SIRPA-204ENST00000622179 CEP126Q9P2H0 1117 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms