RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 AFDNP55196 1824 aaKnown RBP6.06□□□□□ -1.44
LINC00649-219ENST00000622171 UBR2Q8IWV8 1755 aa6.06□□□□□ -1.44
LINC00649-219ENST00000622171 GNPATO15228 680 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 PER1O15534 1290 aaPredicted RBP6.05□□□□□ -1.44
LINC00649-219ENST00000622171 ATP6V1AP38606 617 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 SLC39A6Q13433 755 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 IFNL2Q8IZJ0 200 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 AK7Q96M32 723 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 SLC4A9Q96Q91 983 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 LGR6Q9HBX8 967 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 ATG3Q9NT62 314 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 CICQ96RK0 1608 aaPredicted RBP6.05□□□□□ -1.44
LINC00649-219ENST00000622171 KIAA1551Q9HCM1 1747 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 KDRP35968 1356 aa6.05□□□□□ -1.44
LINC00649-219ENST00000622171 LOC102724428A0A0B4J2F2 783 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
LINC00649-219ENST00000622171 SIK1P57059 783 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 CABP4P57796 275 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 MTHFSDQ2M296 383 aaKnown RBP6.04□□□□□ -1.44
LINC00649-219ENST00000622171 PLEKHO1Q53GL0 409 aaPredicted RBP6.04□□□□□ -1.44
LINC00649-219ENST00000622171 C1orf141Q5JVX7 400 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 SLC27A3Q5K4L6 730 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 ARXQ96QS3 562 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 SGIP1Q9BQI5 828 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 SRP68Q9UHB9 627 aaKnown RBP6.04□□□□□ -1.44
LINC00649-219ENST00000622171 KCPQ6ZWJ8 1503 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 ADAMTS7Q9UKP4 1686 aa6.04□□□□□ -1.44
LINC00649-219ENST00000622171 CCDC88AQ3V6T2 1871 aa6.03□□□□□ -1.44
LINC00649-219ENST00000622171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.03□□□□□ -1.44
LINC00649-219ENST00000622171 PIP4K2AP48426 406 aaPredicted RBP6.03□□□□□ -1.44
LINC00649-219ENST00000622171 DCTN1Q14203 1278 aa6.03□□□□□ -1.44
LINC00649-219ENST00000622171 NFATC2IPQ8NCF5 419 aa6.03□□□□□ -1.44
LINC00649-219ENST00000622171 SYT17Q9BSW7 474 aa6.03□□□□□ -1.44
LINC00649-219ENST00000622171 ZNF330Q9Y3S2 320 aaPredicted RBP6.03□□□□□ -1.44
LINC00649-219ENST00000622171 BRCA1P38398 1863 aaKnown RBP6.02□□□□□ -1.44
LINC00649-219ENST00000622171 YY1P25490 414 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 POLD1P28340 1107 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 PPP2R1AP30153 589 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 PRKAR2BP31323 418 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 DDX10Q13206 875 aaKnown RBP6.02□□□□□ -1.45
LINC00649-219ENST00000622171 NKX1-1Q15270 411 aaPredicted RBP6.02□□□□□ -1.45
LINC00649-219ENST00000622171 PHACTR3Q96KR7 559 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 MRC1P22897 1456 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 KIF13BQ9NQT8 1826 aa6.02□□□□□ -1.45
LINC00649-219ENST00000622171 SCN7AQ01118 1682 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 ANKRD31Q8N7Z5 1873 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 RNMTO43148 476 aaKnown RBP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 KCNQ3O43525 872 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 U2AF1L5P0DN76 240 aaPredicted RBP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 YBX3P16989 372 aaKnown RBP eCLIP6.01□□□□□ -1.452e-6■□□□□ 9.6
LINC00649-219ENST00000622171 U2AF1Q01081 240 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 GPR162Q16538 588 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 DNAJC10Q8IXB1 793 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 SMARCC1Q92922 1105 aaPredicted RBP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 DCAF5Q96JK2 942 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 THUMPD2Q9BTF0 503 aaKnown RBP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 COL11A2P13942 1736 aaPredicted RBP6.01□□□□□ -1.45
LINC00649-219ENST00000622171 MAP3K5Q99683 1374 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 ZNF831Q5JPB2 1677 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 LAMB4A4D0S4 1761 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 BCORQ6W2J9 1755 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 KDM3BQ7LBC6 1761 aa6.01□□□□□ -1.45
LINC00649-219ENST00000622171 PRAMEF22A3QJZ6 481 aa6□□□□□ -1.45
LINC00649-219ENST00000622171 CRKLP46109 303 aaKnown RBP6□□□□□ -1.45
LINC00649-219ENST00000622171 MCM10Q7L590 875 aa6□□□□□ -1.45
LINC00649-219ENST00000622171 CCDC24Q8N4L8 307 aa6□□□□□ -1.45
LINC00649-219ENST00000622171 ZNF526Q8TF50 670 aaPredicted RBP6□□□□□ -1.45
LINC00649-219ENST00000622171 MIS18AQ9NYP9 233 aa6□□□□□ -1.45
LINC00649-219ENST00000622171 MMP10P09238 476 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 CANXP27824 592 aaKnown RBP5.99□□□□□ -1.45
LINC00649-219ENST00000622171 AMOTQ4VCS5 1084 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 AKAP4Q5JQC9 854 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 BICDL1Q6ZP65 573 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 CCDC146Q8IYE0 955 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 ZNF428Q96B54 188 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 RSPH6AQ9H0K4 717 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 SLC52A2Q9HAB3 445 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC00649-219ENST00000622171 ZBTB1Q9Y2K1 713 aa5.99□□□□□ -1.45
LINC00649-219ENST00000622171 RRP7AQ9Y3A4 280 aaKnown RBP5.99□□□□□ -1.45
LINC00649-219ENST00000622171 CARMIL3Q8ND23 1372 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 NPC1L1Q9UHC9 1359 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 ERVV-2B6SEH9 535 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 HSP90AB1P08238 724 aaKnown RBP5.98□□□□□ -1.45
LINC00649-219ENST00000622171 FKBP8Q14318 412 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 IL17REQ8NFR9 667 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 ARHGEF1Q92888 912 aaKnown RBP5.98□□□□□ -1.45
LINC00649-219ENST00000622171 CFAP53Q96M91 514 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 RTCBQ9Y3I0 505 aaKnown RBP5.98□□□□□ -1.45
LINC00649-219ENST00000622171 DLEC1Q9Y238 1755 aa5.98□□□□□ -1.45
LINC00649-219ENST00000622171 NUP98P52948 1817 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 ARFGEF1Q9Y6D6 1849 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 PXDNLA1KZ92 1463 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 COL15A1P39059 1388 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 SBF1O95248 1867 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 A0A0G2JLW4 131 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 DCAF8L1A6NGE4 600 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 GNAT3A8MTJ3 354 aa5.97□□□□□ -1.45
LINC00649-219ENST00000622171 GYS1P13807 737 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms