RNA–Protein interactions for RNA: ENST00000622120.1

LINC00963-213, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 355 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-213ENST00000622120 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
LINC00963-213ENST00000622120 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
LINC00963-213ENST00000622120 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
LINC00963-213ENST00000622120 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
LINC00963-213ENST00000622120 AKAP4Q5JQC9 854 aa16.79■□□□□ 0.28
LINC00963-213ENST00000622120 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
LINC00963-213ENST00000622120 UBR3Q6ZT12 1888 aa16.79■□□□□ 0.28
LINC00963-213ENST00000622120 VIRMAQ69YN4 1812 aaKnown RBP16.79■□□□□ 0.28
LINC00963-213ENST00000622120 COL3A1P02461 1466 aaPredicted RBP16.79■□□□□ 0.28
LINC00963-213ENST00000622120 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
LINC00963-213ENST00000622120 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
LINC00963-213ENST00000622120 NFATC2IPQ8NCF5 419 aa16.77■□□□□ 0.28
LINC00963-213ENST00000622120 PHF14O94880 888 aa16.76■□□□□ 0.27
LINC00963-213ENST00000622120 ITPK1Q13572 414 aa16.76■□□□□ 0.27
LINC00963-213ENST00000622120 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
LINC00963-213ENST00000622120 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
LINC00963-213ENST00000622120 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
LINC00963-213ENST00000622120 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
LINC00963-213ENST00000622120 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
LINC00963-213ENST00000622120 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
LINC00963-213ENST00000622120 MAP3K5Q99683 1374 aa16.75■□□□□ 0.27
LINC00963-213ENST00000622120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
LINC00963-213ENST00000622120 GNPATO15228 680 aa16.74■□□□□ 0.27
LINC00963-213ENST00000622120 SSFA2P28290 1259 aa16.74■□□□□ 0.27
LINC00963-213ENST00000622120 RNMTO43148 476 aaKnown RBP16.73■□□□□ 0.27
LINC00963-213ENST00000622120 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
LINC00963-213ENST00000622120 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
LINC00963-213ENST00000622120 LGR6Q9HBX8 967 aa16.73■□□□□ 0.27
LINC00963-213ENST00000622120 AMIGO3Q86WK7 504 aa16.72■□□□□ 0.27
LINC00963-213ENST00000622120 GAS2L2Q8NHY3 880 aa16.72■□□□□ 0.27
LINC00963-213ENST00000622120 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
LINC00963-213ENST00000622120 COL5A3P25940 1745 aaPredicted RBP16.72■□□□□ 0.27
LINC00963-213ENST00000622120 SMIM5Q71RC9 77 aa16.71■□□□□ 0.27
LINC00963-213ENST00000622120 MRC1P22897 1456 aa16.7■□□□□ 0.26
LINC00963-213ENST00000622120 RC3H1Q5TC82 1133 aaKnown RBP16.7■□□□□ 0.26
LINC00963-213ENST00000622120 RTCBQ9Y3I0 505 aaKnown RBP16.7■□□□□ 0.26
LINC00963-213ENST00000622120 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
LINC00963-213ENST00000622120 ADAMTS7Q9UKP4 1686 aa16.69■□□□□ 0.26
LINC00963-213ENST00000622120 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
LINC00963-213ENST00000622120 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00963-213ENST00000622120 MYH14Q7Z406 1995 aaKnown RBP16.69■□□□□ 0.26
LINC00963-213ENST00000622120 GNAT3A8MTJ3 354 aa16.68■□□□□ 0.26
LINC00963-213ENST00000622120 PRKAR2BP31323 418 aa16.68■□□□□ 0.26
LINC00963-213ENST00000622120 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
LINC00963-213ENST00000622120 YY1P25490 414 aa16.67■□□□□ 0.26
LINC00963-213ENST00000622120 RSPH6AQ9H0K4 717 aa16.67■□□□□ 0.26
LINC00963-213ENST00000622120 TJP1Q07157 1748 aa16.67■□□□□ 0.26
LINC00963-213ENST00000622120 RPS6KA4O75676 772 aa16.66■□□□□ 0.26
LINC00963-213ENST00000622120 ADRA2BP18089 450 aa16.66■□□□□ 0.26
LINC00963-213ENST00000622120 CRKLP46109 303 aaKnown RBP16.66■□□□□ 0.26
LINC00963-213ENST00000622120 TEFQ10587 303 aa16.66■□□□□ 0.26
LINC00963-213ENST00000622120 SLC39A6Q13433 755 aa16.66■□□□□ 0.26
LINC00963-213ENST00000622120 GPR162Q16538 588 aa16.66■□□□□ 0.26
LINC00963-213ENST00000622120 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
LINC00963-213ENST00000622120 CHD4Q14839 1912 aa16.65■□□□□ 0.26
LINC00963-213ENST00000622120 FCHSD2O94868 740 aa16.65■□□□□ 0.26
LINC00963-213ENST00000622120 PELP1Q8IZL8 1130 aaKnown RBP16.65■□□□□ 0.26
LINC00963-213ENST00000622120 NLGN2Q8NFZ4 835 aa16.65■□□□□ 0.26
LINC00963-213ENST00000622120 PHACTR3Q96KR7 559 aa16.65■□□□□ 0.26
LINC00963-213ENST00000622120 RFC4P35249 363 aa16.64■□□□□ 0.25
LINC00963-213ENST00000622120 TTC5Q8N0Z6 440 aa16.64■□□□□ 0.25
LINC00963-213ENST00000622120 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
LINC00963-213ENST00000622120 CD2APQ9Y5K6 639 aa16.64■□□□□ 0.25
LINC00963-213ENST00000622120 DDX10Q13206 875 aaKnown RBP16.63■□□□□ 0.25
LINC00963-213ENST00000622120 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
LINC00963-213ENST00000622120 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
LINC00963-213ENST00000622120 SIPA1L3O60292 1781 aaPredicted RBP16.62■□□□□ 0.25
LINC00963-213ENST00000622120 UBR2Q8IWV8 1755 aa16.62■□□□□ 0.25
LINC00963-213ENST00000622120 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
LINC00963-213ENST00000622120 NEFMP07197 916 aa16.62■□□□□ 0.25
LINC00963-213ENST00000622120 NLGN1Q8N2Q7 840 aa16.62■□□□□ 0.25
LINC00963-213ENST00000622120 C4AP0C0L4 1744 aa16.62■□□□□ 0.25
LINC00963-213ENST00000622120 MMP10P09238 476 aa16.61■□□□□ 0.25
LINC00963-213ENST00000622120 RALBP1Q15311 655 aa16.61■□□□□ 0.25
LINC00963-213ENST00000622120 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
LINC00963-213ENST00000622120 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
LINC00963-213ENST00000622120 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
LINC00963-213ENST00000622120 INTS5Q6P9B9 1019 aaKnown RBP16.6■□□□□ 0.25
LINC00963-213ENST00000622120 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
LINC00963-213ENST00000622120 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
LINC00963-213ENST00000622120 GYS1P13807 737 aa16.59■□□□□ 0.25
LINC00963-213ENST00000622120 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
LINC00963-213ENST00000622120 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
LINC00963-213ENST00000622120 ZPR1O75312 459 aa16.57■□□□□ 0.24
LINC00963-213ENST00000622120 STARD3NLO95772 234 aa16.57■□□□□ 0.24
LINC00963-213ENST00000622120 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
LINC00963-213ENST00000622120 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
LINC00963-213ENST00000622120 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
LINC00963-213ENST00000622120 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
LINC00963-213ENST00000622120 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
LINC00963-213ENST00000622120 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
LINC00963-213ENST00000622120 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
LINC00963-213ENST00000622120 HTATSF1O43719 755 aaKnown RBP16.56■□□□□ 0.24
LINC00963-213ENST00000622120 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
LINC00963-213ENST00000622120 MCM10Q7L590 875 aa16.56■□□□□ 0.24
LINC00963-213ENST00000622120 ZNF496Q96IT1 587 aaPredicted RBP16.56■□□□□ 0.24
LINC00963-213ENST00000622120 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
LINC00963-213ENST00000622120 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
LINC00963-213ENST00000622120 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
LINC00963-213ENST00000622120 ZBTB1Q9Y2K1 713 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms