RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ATP6V1AP38606 617 aa24.22■■□□□ 1.47
SCAMP4-213ENST00000621748 AMIGO3Q86WK7 504 aa24.22■■□□□ 1.47
SCAMP4-213ENST00000621748 SYT17Q9BSW7 474 aa24.22■■□□□ 1.47
SCAMP4-213ENST00000621748 AKAP4Q5JQC9 854 aa24.21■■□□□ 1.47
SCAMP4-213ENST00000621748 SMIM5Q71RC9 77 aa24.21■■□□□ 1.47
SCAMP4-213ENST00000621748 NFATC2IPQ8NCF5 419 aa24.21■■□□□ 1.47
SCAMP4-213ENST00000621748 AK7Q96M32 723 aa24.21■■□□□ 1.47
SCAMP4-213ENST00000621748 UBR3Q6ZT12 1888 aa24.2■■□□□ 1.46
SCAMP4-213ENST00000621748 U2SURPO15042 1029 aaKnown RBP24.2■■□□□ 1.46
SCAMP4-213ENST00000621748 SLC4A9Q96Q91 983 aa24.2■■□□□ 1.46
SCAMP4-213ENST00000621748 SCN11AQ9UI33 1791 aa24.2■■□□□ 1.46
SCAMP4-213ENST00000621748 POLD1P28340 1107 aa24.19■■□□□ 1.46
SCAMP4-213ENST00000621748 MTHFSDQ2M296 383 aaKnown RBP24.19■■□□□ 1.46
SCAMP4-213ENST00000621748 FLAD1Q8NFF5 587 aa24.19■■□□□ 1.46
SCAMP4-213ENST00000621748 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
SCAMP4-213ENST00000621748 RBM42Q9BTD8 480 aaKnown RBP24.18■■□□□ 1.46
SCAMP4-213ENST00000621748 LGR6Q9HBX8 967 aa24.18■■□□□ 1.46
SCAMP4-213ENST00000621748 MSL1Q68DK7 614 aa24.17■■□□□ 1.46
SCAMP4-213ENST00000621748 PHF14O94880 888 aa24.16■■□□□ 1.46
SCAMP4-213ENST00000621748 VIRMAQ69YN4 1812 aaKnown RBP24.16■■□□□ 1.46
SCAMP4-213ENST00000621748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
SCAMP4-213ENST00000621748 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
SCAMP4-213ENST00000621748 RNMTO43148 476 aaKnown RBP24.14■■□□□ 1.45
SCAMP4-213ENST00000621748 CFAP53Q96M91 514 aa24.14■■□□□ 1.45
SCAMP4-213ENST00000621748 MAP3K5Q99683 1374 aa24.14■■□□□ 1.45
SCAMP4-213ENST00000621748 DCAF8L1A6NGE4 600 aa24.13■■□□□ 1.45
SCAMP4-213ENST00000621748 GNPATO15228 680 aa24.13■■□□□ 1.45
SCAMP4-213ENST00000621748 PTCD1O75127 700 aaKnown RBP24.13■■□□□ 1.45
SCAMP4-213ENST00000621748 SSFA2P28290 1259 aa24.13■■□□□ 1.45
SCAMP4-213ENST00000621748 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
SCAMP4-213ENST00000621748 KLHL34Q8N239 644 aa24.11■■□□□ 1.45
SCAMP4-213ENST00000621748 UTRNP46939 3433 aa24.11■■□□□ 1.45
SCAMP4-213ENST00000621748 COL5A3P25940 1745 aaPredicted RBP24.1■■□□□ 1.45
SCAMP4-213ENST00000621748 ADAMTS7Q9UKP4 1686 aa24.1■■□□□ 1.45
SCAMP4-213ENST00000621748 MYH14Q7Z406 1995 aaKnown RBP24.09■■□□□ 1.45
SCAMP4-213ENST00000621748 MRC1P22897 1456 aa24.08■■□□□ 1.45
SCAMP4-213ENST00000621748 RC3H1Q5TC82 1133 aaKnown RBP24.08■■□□□ 1.45
SCAMP4-213ENST00000621748 PHACTR3Q96KR7 559 aa24.08■■□□□ 1.45
SCAMP4-213ENST00000621748 RSPH6AQ9H0K4 717 aa24.08■■□□□ 1.45
SCAMP4-213ENST00000621748 NUDCQ9Y266 331 aa24.08■■□□□ 1.45
SCAMP4-213ENST00000621748 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
SCAMP4-213ENST00000621748 CNTNAP4Q9C0A0 1308 aa24.07■■□□□ 1.44
SCAMP4-213ENST00000621748 SLC39A6Q13433 755 aa24.06■■□□□ 1.44
SCAMP4-213ENST00000621748 GAS2L2Q8NHY3 880 aa24.06■■□□□ 1.44
SCAMP4-213ENST00000621748 RTCBQ9Y3I0 505 aaKnown RBP24.06■■□□□ 1.44
SCAMP4-213ENST00000621748 U2AF1L5P0DN76 240 aaPredicted RBP24.05■■□□□ 1.44
SCAMP4-213ENST00000621748 U2AF1Q01081 240 aaKnown RBP eCLIP24.05■■□□□ 1.44
SCAMP4-213ENST00000621748 IL17REQ8NFR9 667 aa24.05■■□□□ 1.44
SCAMP4-213ENST00000621748 NLGN2Q8NFZ4 835 aa24.05■■□□□ 1.44
SCAMP4-213ENST00000621748 GNAT3A8MTJ3 354 aa24.04■■□□□ 1.44
SCAMP4-213ENST00000621748 TRAPPC3LQ5T215 181 aa24.04■■□□□ 1.44
SCAMP4-213ENST00000621748 TJP1Q07157 1748 aa24.04■■□□□ 1.44
SCAMP4-213ENST00000621748 RPS6KA4O75676 772 aa24.03■■□□□ 1.44
SCAMP4-213ENST00000621748 ARHGEF1Q92888 912 aaKnown RBP24.03■■□□□ 1.44
SCAMP4-213ENST00000621748 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
SCAMP4-213ENST00000621748 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
SCAMP4-213ENST00000621748 YY1P25490 414 aa24.01■■□□□ 1.43
SCAMP4-213ENST00000621748 DNAJC10Q8IXB1 793 aa24.01■■□□□ 1.43
SCAMP4-213ENST00000621748 CICQ96RK0 1608 aaPredicted RBP24.01■■□□□ 1.43
SCAMP4-213ENST00000621748 FCHSD2O94868 740 aa24■■□□□ 1.43
SCAMP4-213ENST00000621748 ADRA2BP18089 450 aa24■■□□□ 1.43
SCAMP4-213ENST00000621748 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
SCAMP4-213ENST00000621748 KCPQ6ZWJ8 1503 aa24■■□□□ 1.43
SCAMP4-213ENST00000621748 INTS5Q6P9B9 1019 aaKnown RBP23.99■■□□□ 1.43
SCAMP4-213ENST00000621748 TEFQ10587 303 aa23.98■■□□□ 1.43
SCAMP4-213ENST00000621748 CD2APQ9Y5K6 639 aa23.98■■□□□ 1.43
SCAMP4-213ENST00000621748 SIPA1L3O60292 1781 aaPredicted RBP23.97■■□□□ 1.43
SCAMP4-213ENST00000621748 RFC4P35249 363 aa23.97■■□□□ 1.43
SCAMP4-213ENST00000621748 GPR162Q16538 588 aa23.97■■□□□ 1.43
SCAMP4-213ENST00000621748 UBR2Q8IWV8 1755 aa23.96■■□□□ 1.43
SCAMP4-213ENST00000621748 CEMIPQ8WUJ3 1361 aa23.96■■□□□ 1.43
SCAMP4-213ENST00000621748 CYP19A1P11511 503 aaPredicted RBP23.96■■□□□ 1.43
SCAMP4-213ENST00000621748 C4AP0C0L4 1744 aa23.96■■□□□ 1.43
SCAMP4-213ENST00000621748 MMP10P09238 476 aa23.95■■□□□ 1.42
SCAMP4-213ENST00000621748 GYS1P13807 737 aa23.95■■□□□ 1.42
SCAMP4-213ENST00000621748 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
SCAMP4-213ENST00000621748 VSIG10Q8N0Z9 540 aa23.94■■□□□ 1.42
SCAMP4-213ENST00000621748 NLGN1Q8N2Q7 840 aa23.94■■□□□ 1.42
SCAMP4-213ENST00000621748 CCDC87Q9NVE4 849 aa23.94■■□□□ 1.42
SCAMP4-213ENST00000621748 CHD4Q14839 1912 aa23.93■■□□□ 1.42
SCAMP4-213ENST00000621748 ZNF790Q6PG37 636 aa23.93■■□□□ 1.42
SCAMP4-213ENST00000621748 TTC5Q8N0Z6 440 aa23.93■■□□□ 1.42
SCAMP4-213ENST00000621748 SRP68Q9UHB9 627 aaKnown RBP23.93■■□□□ 1.42
SCAMP4-213ENST00000621748 RALBP1Q15311 655 aa23.92■■□□□ 1.42
SCAMP4-213ENST00000621748 ZNF496Q96IT1 587 aaPredicted RBP23.92■■□□□ 1.42
SCAMP4-213ENST00000621748 YBX3P16989 372 aaKnown RBP eCLIP23.91■■□□□ 1.423e-7■■□□□ 12
SCAMP4-213ENST00000621748 MCM10Q7L590 875 aa23.91■■□□□ 1.42
SCAMP4-213ENST00000621748 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.42
SCAMP4-213ENST00000621748 USP42Q9H9J4 1324 aaKnown RBP23.89■■□□□ 1.42
SCAMP4-213ENST00000621748 KCNQ3O43525 872 aa23.89■■□□□ 1.41
SCAMP4-213ENST00000621748 DCTN1Q14203 1278 aa23.89■■□□□ 1.41
SCAMP4-213ENST00000621748 RTF1Q92541 710 aaKnown RBP23.89■■□□□ 1.41
SCAMP4-213ENST00000621748 ZBTB1Q9Y2K1 713 aa23.89■■□□□ 1.41
SCAMP4-213ENST00000621748 BTBD11A6QL63 1104 aa23.88■■□□□ 1.41
SCAMP4-213ENST00000621748 PLEKHF1Q96S99 279 aa23.88■■□□□ 1.41
SCAMP4-213ENST00000621748 HEG1Q9ULI3 1381 aa23.88■■□□□ 1.41
SCAMP4-213ENST00000621748 FKBP8Q14318 412 aa23.87■■□□□ 1.41
SCAMP4-213ENST00000621748 HTATSF1O43719 755 aaKnown RBP23.86■■□□□ 1.41
SCAMP4-213ENST00000621748 DLG5Q8TDM6 1919 aa23.86■■□□□ 1.41
SCAMP4-213ENST00000621748 KIF13BQ9NQT8 1826 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms