RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ATP6V1AP38606 617 aa23.2■■□□□ 1.3
TARDBP-225ENST00000621715 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
TARDBP-225ENST00000621715 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
TARDBP-225ENST00000621715 N4BP2Q86UW6 1770 aaPredicted RBP23.19■■□□□ 1.3
TARDBP-225ENST00000621715 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
TARDBP-225ENST00000621715 POLR3GLQ9BT43 218 aa23.18■■□□□ 1.3
TARDBP-225ENST00000621715 MYH14Q7Z406 1995 aaKnown RBP23.17■■□□□ 1.3
TARDBP-225ENST00000621715 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
TARDBP-225ENST00000621715 PXDNLA1KZ92 1463 aa23.16■■□□□ 1.3
TARDBP-225ENST00000621715 ZNF831Q5JPB2 1677 aa23.16■■□□□ 1.3
TARDBP-225ENST00000621715 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
TARDBP-225ENST00000621715 MMP10P09238 476 aa23.15■■□□□ 1.3
TARDBP-225ENST00000621715 GPBP1L1Q9HC44 474 aaPredicted RBP23.15■■□□□ 1.3
TARDBP-225ENST00000621715 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.29
TARDBP-225ENST00000621715 C4AP0C0L4 1744 aa23.13■■□□□ 1.29
TARDBP-225ENST00000621715 AEBP1Q8IUX7 1158 aa23.12■■□□□ 1.29
TARDBP-225ENST00000621715 BRCA1P38398 1863 aaKnown RBP23.11■■□□□ 1.29
TARDBP-225ENST00000621715 RBM42Q9BTD8 480 aaKnown RBP23.1■■□□□ 1.29
TARDBP-225ENST00000621715 PANK3Q9H999 370 aa23.1■■□□□ 1.29
TARDBP-225ENST00000621715 C10orf71Q711Q0 1435 aa23.09■■□□□ 1.29
TARDBP-225ENST00000621715 ERVV-2B6SEH9 535 aa23.09■■□□□ 1.29
TARDBP-225ENST00000621715 ARHGEF1Q92888 912 aaKnown RBP23.09■■□□□ 1.29
TARDBP-225ENST00000621715 TIMELESSQ9UNS1 1208 aa23.09■■□□□ 1.29
TARDBP-225ENST00000621715 A0A0G2JLW4 131 aa23.08■■□□□ 1.29
TARDBP-225ENST00000621715 KIF3CO14782 793 aa23.08■■□□□ 1.29
TARDBP-225ENST00000621715 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
TARDBP-225ENST00000621715 RTCBQ9Y3I0 505 aaKnown RBP23.08■■□□□ 1.29
TARDBP-225ENST00000621715 PLEKHG2Q9H7P9 1386 aa23.08■■□□□ 1.29
TARDBP-225ENST00000621715 HSPA5P11021 654 aaKnown RBP23.07■■□□□ 1.28
TARDBP-225ENST00000621715 GYS1P13807 737 aa23.07■■□□□ 1.28
TARDBP-225ENST00000621715 DCAF5Q96JK2 942 aa23.07■■□□□ 1.28
TARDBP-225ENST00000621715 TJP1Q07157 1748 aa23.07■■□□□ 1.28
TARDBP-225ENST00000621715 CNTNAP4Q9C0A0 1308 aa23.07■■□□□ 1.28
TARDBP-225ENST00000621715 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
TARDBP-225ENST00000621715 HSPA6P17066 643 aa23.05■■□□□ 1.28
TARDBP-225ENST00000621715 RC3H1Q5TC82 1133 aaKnown RBP23.05■■□□□ 1.28
TARDBP-225ENST00000621715 ADAMTS7Q9UKP4 1686 aa23.04■■□□□ 1.28
TARDBP-225ENST00000621715 DPEP1P16444 411 aa23.04■■□□□ 1.28
TARDBP-225ENST00000621715 PLEKHO1Q53GL0 409 aaPredicted RBP23.04■■□□□ 1.28
TARDBP-225ENST00000621715 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
TARDBP-225ENST00000621715 RPS6KA4O75676 772 aa23.03■■□□□ 1.28
TARDBP-225ENST00000621715 BCS1LQ9Y276 419 aa23.03■■□□□ 1.28
TARDBP-225ENST00000621715 SCN11AQ9UI33 1791 aa23.02■■□□□ 1.28
TARDBP-225ENST00000621715 PTCD1O75127 700 aaKnown RBP23.02■■□□□ 1.28
TARDBP-225ENST00000621715 KCNA3P22001 575 aa23.02■■□□□ 1.28
TARDBP-225ENST00000621715 CABP4P57796 275 aa23.02■■□□□ 1.28
TARDBP-225ENST00000621715 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
TARDBP-225ENST00000621715 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
TARDBP-225ENST00000621715 HSP90AB1P08238 724 aaKnown RBP23.01■■□□□ 1.27
TARDBP-225ENST00000621715 TGFB2P61812 414 aa23.01■■□□□ 1.27
TARDBP-225ENST00000621715 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
TARDBP-225ENST00000621715 ADRA2BP18089 450 aa23■■□□□ 1.27
TARDBP-225ENST00000621715 RFC4P35249 363 aa23■■□□□ 1.27
TARDBP-225ENST00000621715 MTHFSP49914 203 aa23■■□□□ 1.27
TARDBP-225ENST00000621715 CRKLP46109 303 aaKnown RBP22.99■■□□□ 1.27
TARDBP-225ENST00000621715 EIF4G2P78344 907 aaKnown RBP eCLIP22.99■■□□□ 1.27
TARDBP-225ENST00000621715 DDR1Q08345 913 aa22.99■■□□□ 1.27
TARDBP-225ENST00000621715 IFFO2Q5TF58 517 aa22.99■■□□□ 1.27
TARDBP-225ENST00000621715 SULT6B1Q6IMI4 303 aa22.99■■□□□ 1.27
TARDBP-225ENST00000621715 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
TARDBP-225ENST00000621715 IL13P35225 146 aa22.98■■□□□ 1.27
TARDBP-225ENST00000621715 FKBP8Q14318 412 aa22.98■■□□□ 1.27
TARDBP-225ENST00000621715 AMOTQ4VCS5 1084 aa22.98■■□□□ 1.27
TARDBP-225ENST00000621715 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
TARDBP-225ENST00000621715 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
TARDBP-225ENST00000621715 MORC1Q86VD1 984 aa22.97■■□□□ 1.27
TARDBP-225ENST00000621715 CCDC87Q9NVE4 849 aa22.97■■□□□ 1.27
TARDBP-225ENST00000621715 INTS5Q6P9B9 1019 aaKnown RBP22.96■■□□□ 1.27
TARDBP-225ENST00000621715 ARHGAP27Q6ZUM4 889 aa22.96■■□□□ 1.27
TARDBP-225ENST00000621715 FCHSD2O94868 740 aa22.95■■□□□ 1.26
TARDBP-225ENST00000621715 USP42Q9H9J4 1324 aaKnown RBP22.95■■□□□ 1.26
TARDBP-225ENST00000621715 NMRK2Q9NPI5 230 aa22.95■■□□□ 1.26
TARDBP-225ENST00000621715 PARP3Q9Y6F1 533 aa22.95■■□□□ 1.26
TARDBP-225ENST00000621715 C1orf141Q5JVX7 400 aa22.94■■□□□ 1.26
TARDBP-225ENST00000621715 LGR6Q9HBX8 967 aa22.93■■□□□ 1.26
TARDBP-225ENST00000621715 AMER1Q5JTC6 1135 aaPredicted RBP22.92■■□□□ 1.26
TARDBP-225ENST00000621715 CHRNA5P30532 468 aa22.91■■□□□ 1.26
TARDBP-225ENST00000621715 DNAJC10Q8IXB1 793 aa22.91■■□□□ 1.26
TARDBP-225ENST00000621715 MRC1P22897 1456 aa22.91■■□□□ 1.26
TARDBP-225ENST00000621715 SBF1O95248 1867 aa22.9■■□□□ 1.26
TARDBP-225ENST00000621715 AFDNP55196 1824 aaKnown RBP22.9■■□□□ 1.26
TARDBP-225ENST00000621715 KCPQ6ZWJ8 1503 aa22.9■■□□□ 1.26
TARDBP-225ENST00000621715 POLRMTO00411 1230 aaKnown RBP22.89■■□□□ 1.25
TARDBP-225ENST00000621715 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
TARDBP-225ENST00000621715 C9orf131Q5VYM1 1079 aa22.89■■□□□ 1.25
TARDBP-225ENST00000621715 PCNTO95613 3336 aa22.89■■□□□ 1.25
TARDBP-225ENST00000621715 TM4SF1P30408 202 aa22.88■■□□□ 1.25
TARDBP-225ENST00000621715 HMOX1P09601 288 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 AKAP4Q5JQC9 854 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 USPL1Q5W0Q7 1092 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 DNAJC5GQ8N7S2 189 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 SLC52A2Q9HAB3 445 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
TARDBP-225ENST00000621715 SOS1Q07889 1333 aaPredicted RBP22.86■■□□□ 1.25
TARDBP-225ENST00000621715 TOMM70O94826 608 aa22.86■■□□□ 1.25
TARDBP-225ENST00000621715 KNSTRNQ9Y448 316 aa22.86■■□□□ 1.25
TARDBP-225ENST00000621715 NRXN2Q9P2S2 1712 aa22.85■■□□□ 1.25
TARDBP-225ENST00000621715 RNMTO43148 476 aaKnown RBP22.85■■□□□ 1.25
TARDBP-225ENST00000621715 CYP19A1P11511 503 aaPredicted RBP22.85■■□□□ 1.25
TARDBP-225ENST00000621715 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms