RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 CICQ96RK0 1608 aaPredicted RBP9.51□□□□□ -0.89
PDE4D-227ENST00000621323 ACEP12821 1306 aa9.51□□□□□ -0.89
PDE4D-227ENST00000621323 ABTB2Q8N961 1025 aa9.5□□□□□ -0.89
PDE4D-227ENST00000621323 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
PDE4D-227ENST00000621323 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
PDE4D-227ENST00000621323 SOX12O15370 315 aa9.49□□□□□ -0.89
PDE4D-227ENST00000621323 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
PDE4D-227ENST00000621323 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 KCNQ4P56696 695 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 CARD10Q9BWT7 1032 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 NMRK2Q9NPI5 230 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 PPIP5K1Q6PFW1 1433 aa9.48□□□□□ -0.89
PDE4D-227ENST00000621323 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
PDE4D-227ENST00000621323 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
PDE4D-227ENST00000621323 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
PDE4D-227ENST00000621323 TFCP2L1Q9NZI6 479 aa9.47□□□□□ -0.89
PDE4D-227ENST00000621323 CD2APQ9Y5K6 639 aa9.47□□□□□ -0.89
PDE4D-227ENST00000621323 EXOC5O00471 708 aa9.46□□□□□ -0.9
PDE4D-227ENST00000621323 ST18O60284 1047 aa9.46□□□□□ -0.9
PDE4D-227ENST00000621323 PPP1R37O75864 691 aa9.46□□□□□ -0.9
PDE4D-227ENST00000621323 SLC27A3Q5K4L6 730 aa9.46□□□□□ -0.9
PDE4D-227ENST00000621323 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
PDE4D-227ENST00000621323 COL23A1Q86Y22 540 aaPredicted RBP9.46□□□□□ -0.9
PDE4D-227ENST00000621323 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
PDE4D-227ENST00000621323 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
PDE4D-227ENST00000621323 TMEM106CQ9BVX2 250 aa9.45□□□□□ -0.9
PDE4D-227ENST00000621323 IGSF1Q8N6C5 1336 aa9.45□□□□□ -0.9
PDE4D-227ENST00000621323 PIK3C2AO00443 1686 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 QRICH2Q9H0J4 1663 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 NSD2O96028 1365 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 CCDC7Q96M83 1385 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 E2F4Q16254 413 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 CDK19Q9BWU1 502 aa9.43□□□□□ -0.9
PDE4D-227ENST00000621323 FAM161AQ3B820 660 aa9.42□□□□□ -0.9
PDE4D-227ENST00000621323 ARHGEF25Q86VW2 580 aa9.42□□□□□ -0.9
PDE4D-227ENST00000621323 FBXO22Q8NEZ5 403 aa9.42□□□□□ -0.9
PDE4D-227ENST00000621323 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
PDE4D-227ENST00000621323 LY75O60449 1722 aa9.42□□□□□ -0.9
PDE4D-227ENST00000621323 NFAT5O94916 1531 aa9.41□□□□□ -0.9
PDE4D-227ENST00000621323 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
PDE4D-227ENST00000621323 FSTL1Q12841 308 aa9.41□□□□□ -0.9
PDE4D-227ENST00000621323 LARP6Q9BRS8 491 aaKnown RBP9.41□□□□□ -0.9
PDE4D-227ENST00000621323 C10orf71Q711Q0 1435 aa9.39□□□□□ -0.91
PDE4D-227ENST00000621323 PDE4AP27815 886 aa9.39□□□□□ -0.91
PDE4D-227ENST00000621323 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
PDE4D-227ENST00000621323 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 KIAA1551Q9HCM1 1747 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 PXDNLA1KZ92 1463 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
PDE4D-227ENST00000621323 TOGARAM1Q9Y4F4 1720 aa9.37□□□□□ -0.91
PDE4D-227ENST00000621323 CCNL1Q9UK58 526 aaPredicted RBP9.37□□□□□ -0.91
PDE4D-227ENST00000621323 DOT1LQ8TEK3 1739 aa9.36□□□□□ -0.91
PDE4D-227ENST00000621323 ERBB3P21860 1342 aa9.36□□□□□ -0.91
PDE4D-227ENST00000621323 IL2RBP14784 551 aa9.36□□□□□ -0.91
PDE4D-227ENST00000621323 MPHOSPH9Q99550 1183 aa9.36□□□□□ -0.91
PDE4D-227ENST00000621323 COLQQ9Y215 455 aaPredicted RBP9.36□□□□□ -0.91
PDE4D-227ENST00000621323 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
PDE4D-227ENST00000621323 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
PDE4D-227ENST00000621323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDE4D-227ENST00000621323 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
PDE4D-227ENST00000621323 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
PDE4D-227ENST00000621323 TNRC18O15417 2968 aaPredicted RBP9.35□□□□□ -0.91
PDE4D-227ENST00000621323 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
PDE4D-227ENST00000621323 FOXN1O15353 648 aa9.34□□□□□ -0.91
PDE4D-227ENST00000621323 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
PDE4D-227ENST00000621323 C16orf71Q8IYS4 520 aaPredicted RBP9.34□□□□□ -0.91
PDE4D-227ENST00000621323 SLAIN1Q8ND83 568 aa9.34□□□□□ -0.91
PDE4D-227ENST00000621323 C5P01031 1676 aa9.34□□□□□ -0.91
PDE4D-227ENST00000621323 PLEKHG2Q9H7P9 1386 aa9.34□□□□□ -0.91
PDE4D-227ENST00000621323 PKD1L3Q7Z443 1732 aa9.34□□□□□ -0.92
PDE4D-227ENST00000621323 NLRP2Q9NX02 1062 aa9.33□□□□□ -0.92
PDE4D-227ENST00000621323 KIAA1210Q9ULL0 1709 aa9.33□□□□□ -0.92
PDE4D-227ENST00000621323 SEMA3EO15041 775 aa9.32□□□□□ -0.92
PDE4D-227ENST00000621323 C9orf131Q5VYM1 1079 aa9.32□□□□□ -0.92
PDE4D-227ENST00000621323 SMYD5Q6GMV2 418 aa9.32□□□□□ -0.92
PDE4D-227ENST00000621323 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
PDE4D-227ENST00000621323 SYTL4Q96C24 671 aaPredicted RBP9.32□□□□□ -0.92
PDE4D-227ENST00000621323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
PDE4D-227ENST00000621323 PDE4DIPQ5VU43 2346 aa9.32□□□□□ -0.92
PDE4D-227ENST00000621323 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
PDE4D-227ENST00000621323 KIF13BQ9NQT8 1826 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 SEC24BO95487 1268 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 TIE1P35590 1138 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 PPARGC1BQ86YN6 1023 aaKnown RBP9.31□□□□□ -0.92
PDE4D-227ENST00000621323 KCNH5Q8NCM2 988 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 DDX54Q8TDD1 881 aaKnown RBP9.31□□□□□ -0.92
PDE4D-227ENST00000621323 MS4A4AQ96JQ5 239 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 PRDM10Q9NQV6 1147 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 CABP1Q9NZU7 370 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
PDE4D-227ENST00000621323 N4BP2Q86UW6 1770 aaPredicted RBP9.3□□□□□ -0.92
PDE4D-227ENST00000621323 ARHGAP27Q6ZUM4 889 aa9.3□□□□□ -0.92
PDE4D-227ENST00000621323 ABHD8Q96I13 439 aa9.3□□□□□ -0.92
PDE4D-227ENST00000621323 BCS1LQ9Y276 419 aa9.3□□□□□ -0.92
PDE4D-227ENST00000621323 TAF1LQ8IZX4 1826 aa9.29□□□□□ -0.92
PDE4D-227ENST00000621323 C4BP0C0L5 1744 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms