RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SLC16A10Q8TF71 515 aa15.77■□□□□ 0.12
CPNE3-210ENST00000621245 POLA2Q14181 598 aa15.76■□□□□ 0.11
CPNE3-210ENST00000621245 AEBP1Q8IUX7 1158 aa15.76■□□□□ 0.11
CPNE3-210ENST00000621245 KDM6AO15550 1401 aaPredicted RBP15.76■□□□□ 0.11
CPNE3-210ENST00000621245 SCN11AQ9UI33 1791 aa15.75■□□□□ 0.11
CPNE3-210ENST00000621245 MYH14Q7Z406 1995 aaKnown RBP15.75■□□□□ 0.11
CPNE3-210ENST00000621245 C4AP0C0L4 1744 aa15.75■□□□□ 0.11
CPNE3-210ENST00000621245 LINC00116Q8NCU8 138 aa15.75■□□□□ 0.11
CPNE3-210ENST00000621245 ASAP1Q9ULH1 1129 aa15.75■□□□□ 0.11
CPNE3-210ENST00000621245 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
CPNE3-210ENST00000621245 ITPK1Q13572 414 aa15.74■□□□□ 0.11
CPNE3-210ENST00000621245 TJP1Q07157 1748 aa15.74■□□□□ 0.11
CPNE3-210ENST00000621245 ZNF831Q5JPB2 1677 aa15.73■□□□□ 0.11
CPNE3-210ENST00000621245 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
CPNE3-210ENST00000621245 POLD1P28340 1107 aa15.73■□□□□ 0.11
CPNE3-210ENST00000621245 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
CPNE3-210ENST00000621245 KDRP35968 1356 aa15.73■□□□□ 0.11
CPNE3-210ENST00000621245 PHF14O94880 888 aa15.72■□□□□ 0.11
CPNE3-210ENST00000621245 VASPP50552 380 aaPredicted RBP15.72■□□□□ 0.11
CPNE3-210ENST00000621245 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
CPNE3-210ENST00000621245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.72■□□□□ 0.112e-6■■□□□ 12.1
CPNE3-210ENST00000621245 LOC102724428A0A0B4J2F2 783 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 SIK1P57059 783 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 IFNL2Q8IZJ0 200 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 ZNF784Q8NCA9 323 aaPredicted RBP15.71■□□□□ 0.11
CPNE3-210ENST00000621245 SLC4A9Q96Q91 983 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 ATG3Q9NT62 314 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 TMOD3Q9NYL9 352 aa15.71■□□□□ 0.11
CPNE3-210ENST00000621245 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.15e-6■■■■□ 19.4
CPNE3-210ENST00000621245 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
CPNE3-210ENST00000621245 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
CPNE3-210ENST00000621245 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
CPNE3-210ENST00000621245 AK7Q96M32 723 aa15.7■□□□□ 0.1
CPNE3-210ENST00000621245 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
CPNE3-210ENST00000621245 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.69■□□□□ 0.1
CPNE3-210ENST00000621245 GPR162Q16538 588 aa15.69■□□□□ 0.1
CPNE3-210ENST00000621245 N4BP2Q86UW6 1770 aaPredicted RBP15.69■□□□□ 0.1
CPNE3-210ENST00000621245 CEP350Q5VT06 3117 aa15.69■□□□□ 0.1
CPNE3-210ENST00000621245 CAPN15O75808 1086 aa15.68■□□□□ 0.1
CPNE3-210ENST00000621245 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
CPNE3-210ENST00000621245 PLEKHG2Q9H7P9 1386 aa15.67■□□□□ 0.1
CPNE3-210ENST00000621245 IL13P35225 146 aa15.67■□□□□ 0.1
CPNE3-210ENST00000621245 ZNF530Q6P9A1 599 aaPredicted RBP15.67■□□□□ 0.1
CPNE3-210ENST00000621245 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
CPNE3-210ENST00000621245 ATP6V1AP38606 617 aa15.66■□□□□ 0.1
CPNE3-210ENST00000621245 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
CPNE3-210ENST00000621245 GNPATO15228 680 aa15.65■□□□□ 0.1
CPNE3-210ENST00000621245 SULT6B1Q6IMI4 303 aa15.65■□□□□ 0.1
CPNE3-210ENST00000621245 WWC3Q9ULE0 1092 aa15.65■□□□□ 0.1
CPNE3-210ENST00000621245 KNSTRNQ9Y448 316 aa15.65■□□□□ 0.1
CPNE3-210ENST00000621245 BRCA1P38398 1863 aaKnown RBP15.64■□□□□ 0.09
CPNE3-210ENST00000621245 PER1O15534 1290 aaPredicted RBP15.63■□□□□ 0.09
CPNE3-210ENST00000621245 SSFA2P28290 1259 aa15.63■□□□□ 0.09
CPNE3-210ENST00000621245 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
CPNE3-210ENST00000621245 FLAD1Q8NFF5 587 aa15.63■□□□□ 0.09
CPNE3-210ENST00000621245 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
CPNE3-210ENST00000621245 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
CPNE3-210ENST00000621245 ERVV-2B6SEH9 535 aa15.62■□□□□ 0.09
CPNE3-210ENST00000621245 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
CPNE3-210ENST00000621245 DCAF5Q96JK2 942 aa15.62■□□□□ 0.09
CPNE3-210ENST00000621245 MRC1P22897 1456 aa15.62■□□□□ 0.09
CPNE3-210ENST00000621245 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
CPNE3-210ENST00000621245 MTHFSP49914 203 aa15.61■□□□□ 0.09
CPNE3-210ENST00000621245 CNGB1Q14028 1251 aaPredicted RBP15.61■□□□□ 0.09
CPNE3-210ENST00000621245 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
CPNE3-210ENST00000621245 HMOX1P09601 288 aa15.6■□□□□ 0.09
CPNE3-210ENST00000621245 CABP4P57796 275 aa15.6■□□□□ 0.09
CPNE3-210ENST00000621245 IFNLR1Q8IU57 520 aaPredicted RBP15.6■□□□□ 0.09
CPNE3-210ENST00000621245 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
CPNE3-210ENST00000621245 PTCD1O75127 700 aaKnown RBP15.59■□□□□ 0.09
CPNE3-210ENST00000621245 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
CPNE3-210ENST00000621245 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
CPNE3-210ENST00000621245 NFATC2IPQ8NCF5 419 aa15.59■□□□□ 0.09
CPNE3-210ENST00000621245 PXDNLA1KZ92 1463 aa15.59■□□□□ 0.09
CPNE3-210ENST00000621245 C1orf141Q5JVX7 400 aa15.58■□□□□ 0.08
CPNE3-210ENST00000621245 LGR6Q9HBX8 967 aa15.58■□□□□ 0.08
CPNE3-210ENST00000621245 CNTNAP4Q9C0A0 1308 aa15.58■□□□□ 0.08
CPNE3-210ENST00000621245 AFDNP55196 1824 aaKnown RBP15.57■□□□□ 0.08
CPNE3-210ENST00000621245 MMP10P09238 476 aa15.57■□□□□ 0.08
CPNE3-210ENST00000621245 ARHGEF1Q92888 912 aaKnown RBP15.56■□□□□ 0.08
CPNE3-210ENST00000621245 C10orf71Q711Q0 1435 aa15.56■□□□□ 0.08
CPNE3-210ENST00000621245 ATP10DQ9P241 1426 aa15.55■□□□□ 0.08
CPNE3-210ENST00000621245 GYS1P13807 737 aa15.55■□□□□ 0.08
CPNE3-210ENST00000621245 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
CPNE3-210ENST00000621245 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
CPNE3-210ENST00000621245 ADCY9O60503 1353 aa15.54■□□□□ 0.08
CPNE3-210ENST00000621245 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
CPNE3-210ENST00000621245 C1QBPQ07021 282 aaKnown RBP15.54■□□□□ 0.08
CPNE3-210ENST00000621245 SLC39A6Q13433 755 aa15.54■□□□□ 0.08
CPNE3-210ENST00000621245 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
CPNE3-210ENST00000621245 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
CPNE3-210ENST00000621245 RC3H1Q5TC82 1133 aaKnown RBP15.54■□□□□ 0.08
CPNE3-210ENST00000621245 ARFGEF1Q9Y6D6 1849 aa15.54■□□□□ 0.08
CPNE3-210ENST00000621245 GRIN3BO60391 1043 aa15.53■□□□□ 0.08
CPNE3-210ENST00000621245 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
CPNE3-210ENST00000621245 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
CPNE3-210ENST00000621245 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
CPNE3-210ENST00000621245 NPC1L1Q9UHC9 1359 aa15.52■□□□□ 0.08
CPNE3-210ENST00000621245 RNMTO43148 476 aaKnown RBP15.52■□□□□ 0.08
CPNE3-210ENST00000621245 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms